RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 TSPYL4Q9UJ04 414 aa23.26■■□□□ 1.31
HTATSF1-204ENST00000535601 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
HTATSF1-204ENST00000535601 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
HTATSF1-204ENST00000535601 ATF3P18847 181 aa23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 AXIN2Q9Y2T1 843 aa23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 DDX19BQ9UMR2 479 aa23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 ANP32AP39687 249 aaKnown RBP23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 IP6K1Q92551 441 aa23.25■■□□□ 1.31
HTATSF1-204ENST00000535601 C1orf167Q5SNV9 1468 aa23.24■■□□□ 1.31
HTATSF1-204ENST00000535601 CRB1P82279 1406 aa23.24■■□□□ 1.31
HTATSF1-204ENST00000535601 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
HTATSF1-204ENST00000535601 C8orf34Q49A92 452 aa23.24■■□□□ 1.31
HTATSF1-204ENST00000535601 NFAT5O94916 1531 aa23.23■■□□□ 1.31
HTATSF1-204ENST00000535601 IL17REQ8NFR9 667 aa23.22■■□□□ 1.31
HTATSF1-204ENST00000535601 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
HTATSF1-204ENST00000535601 RWDD1Q9H446 243 aaPredicted RBP23.21■■□□□ 1.31
HTATSF1-204ENST00000535601 GAS2L2Q8NHY3 880 aa23.21■■□□□ 1.31
HTATSF1-204ENST00000535601 GNAT3A8MTJ3 354 aa23.2■■□□□ 1.3
HTATSF1-204ENST00000535601 G2E3Q7L622 706 aa23.19■■□□□ 1.3
HTATSF1-204ENST00000535601 LGR6Q9HBX8 967 aa23.19■■□□□ 1.3
HTATSF1-204ENST00000535601 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
HTATSF1-204ENST00000535601 MSH6P52701 1360 aa23.18■■□□□ 1.3
HTATSF1-204ENST00000535601 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
HTATSF1-204ENST00000535601 FAM161AQ3B820 660 aa23.17■■□□□ 1.3
HTATSF1-204ENST00000535601 ARHGEF25Q86VW2 580 aa23.17■■□□□ 1.3
HTATSF1-204ENST00000535601 KCNH5Q8NCM2 988 aa23.17■■□□□ 1.3
HTATSF1-204ENST00000535601 RGPD5Q99666 1765 aa23.17■■□□□ 1.3
HTATSF1-204ENST00000535601 F6X3S4 739 aa23.16■■□□□ 1.3
HTATSF1-204ENST00000535601 SEC24BO95487 1268 aa23.16■■□□□ 1.3
HTATSF1-204ENST00000535601 CHRNA2Q15822 529 aa23.16■■□□□ 1.3
HTATSF1-204ENST00000535601 ANKRD24Q8TF21 1146 aa23.16■■□□□ 1.3
HTATSF1-204ENST00000535601 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
HTATSF1-204ENST00000535601 MST1RQ04912 1400 aa23.15■■□□□ 1.3
HTATSF1-204ENST00000535601 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
HTATSF1-204ENST00000535601 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
HTATSF1-204ENST00000535601 ZNF335Q9H4Z2 1342 aaPredicted RBP23.15■■□□□ 1.3
HTATSF1-204ENST00000535601 ZNF428Q96B54 188 aa23.14■■□□□ 1.3
HTATSF1-204ENST00000535601 IPO9Q96P70 1041 aaKnown RBP23.14■■□□□ 1.29
HTATSF1-204ENST00000535601 MAP3K5Q99683 1374 aa23.13■■□□□ 1.29
HTATSF1-204ENST00000535601 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
HTATSF1-204ENST00000535601 ABCC4O15439 1325 aa23.13■■□□□ 1.29
HTATSF1-204ENST00000535601 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
HTATSF1-204ENST00000535601 KCNQ3O43525 872 aa23.12■■□□□ 1.29
HTATSF1-204ENST00000535601 SLC4A3P48751 1232 aa23.12■■□□□ 1.29
HTATSF1-204ENST00000535601 BRPF1P55201 1214 aaPredicted RBP23.12■■□□□ 1.29
HTATSF1-204ENST00000535601 RTL1A6NKG5 1358 aa23.11■■□□□ 1.29
HTATSF1-204ENST00000535601 ZNF530Q6P9A1 599 aaPredicted RBP23.11■■□□□ 1.29
HTATSF1-204ENST00000535601 LNPKQ9C0E8 428 aa23.11■■□□□ 1.29
HTATSF1-204ENST00000535601 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
HTATSF1-204ENST00000535601 KIF24Q5T7B8 1368 aa23.1■■□□□ 1.29
HTATSF1-204ENST00000535601 SIRT2Q8IXJ6 389 aa23.1■■□□□ 1.29
HTATSF1-204ENST00000535601 ARHGAP45Q92619 1136 aa23.09■■□□□ 1.29
HTATSF1-204ENST00000535601 AAMPQ13685 434 aa23.08■■□□□ 1.29
HTATSF1-204ENST00000535601 API5Q9BZZ5 524 aaKnown RBP23.08■■□□□ 1.29
HTATSF1-204ENST00000535601 PXDNQ92626 1479 aa23.08■■□□□ 1.28
HTATSF1-204ENST00000535601 HDAC1Q13547 482 aaPredicted RBP23.08■■□□□ 1.28
HTATSF1-204ENST00000535601 RGS12O14924 1447 aa23.07■■□□□ 1.28
HTATSF1-204ENST00000535601 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
HTATSF1-204ENST00000535601 MED1Q15648 1581 aaPredicted RBP23.07■■□□□ 1.28
HTATSF1-204ENST00000535601 NLRP2Q9NX02 1062 aa23.07■■□□□ 1.28
HTATSF1-204ENST00000535601 USP19O94966 1318 aa23.07■■□□□ 1.28
HTATSF1-204ENST00000535601 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 TAF7Q15545 349 aaPredicted RBP23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 ZBTB47Q9UFB7 747 aaPredicted RBP23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 APBB1O00213 710 aa23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 ANXA1P04083 346 aa23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 LMTK3Q96Q04 1460 aa23.06■■□□□ 1.28
HTATSF1-204ENST00000535601 MEIS3Q99687 375 aa23.05■■□□□ 1.28
HTATSF1-204ENST00000535601 XIRP1Q702N8 1843 aaKnown RBP23.04■■□□□ 1.28
HTATSF1-204ENST00000535601 STRCQ7RTU9 1775 aa23.04■■□□□ 1.28
HTATSF1-204ENST00000535601 SLIT3O75094 1523 aa23.04■■□□□ 1.28
HTATSF1-204ENST00000535601 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
HTATSF1-204ENST00000535601 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
HTATSF1-204ENST00000535601 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
HTATSF1-204ENST00000535601 SMC5Q8IY18 1101 aa23.03■■□□□ 1.28
HTATSF1-204ENST00000535601 ERBB3P21860 1342 aa23.02■■□□□ 1.28
HTATSF1-204ENST00000535601 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
HTATSF1-204ENST00000535601 ALS2Q96Q42 1657 aa23.01■■□□□ 1.27
HTATSF1-204ENST00000535601 FKBP5Q13451 457 aaPredicted RBP23.01■■□□□ 1.27
HTATSF1-204ENST00000535601 PHAXQ9H814 394 aaKnown RBP23.01■■□□□ 1.27
HTATSF1-204ENST00000535601 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
HTATSF1-204ENST00000535601 STK31Q9BXU1 1019 aa23■■□□□ 1.27
HTATSF1-204ENST00000535601 HTATSF1O43719 755 aaKnown RBP23■■□□□ 1.27
HTATSF1-204ENST00000535601 LRRC37A3O60309 1634 aa23■■□□□ 1.27
HTATSF1-204ENST00000535601 TEFQ10587 303 aa23■■□□□ 1.27
HTATSF1-204ENST00000535601 NPHP3Q7Z494 1330 aa23■■□□□ 1.27
HTATSF1-204ENST00000535601 PLEKHO1Q53GL0 409 aaPredicted RBP23■■□□□ 1.27
HTATSF1-204ENST00000535601 NBR1Q14596 966 aa22.99■■□□□ 1.27
HTATSF1-204ENST00000535601 FLIIQ13045 1269 aa22.98■■□□□ 1.27
HTATSF1-204ENST00000535601 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
HTATSF1-204ENST00000535601 HDGFL1Q5TGJ6 251 aa22.98■■□□□ 1.27
HTATSF1-204ENST00000535601 INTS3Q68E01 1043 aaKnown RBP22.98■■□□□ 1.27
HTATSF1-204ENST00000535601 BTBD11A6QL63 1104 aa22.98■■□□□ 1.27
HTATSF1-204ENST00000535601 NUCB1Q02818 461 aa22.97■■□□□ 1.27
HTATSF1-204ENST00000535601 CHD1LQ86WJ1 897 aa22.97■■□□□ 1.27
HTATSF1-204ENST00000535601 AKAP4Q5JQC9 854 aa22.96■■□□□ 1.27
HTATSF1-204ENST00000535601 CEMIPQ8WUJ3 1361 aa22.96■■□□□ 1.27
HTATSF1-204ENST00000535601 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms