RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
CHFR-210ENST00000535527 THRAP3Q9Y2W1 955 aaKnown RBP17.86■□□□□ 0.45
CHFR-210ENST00000535527 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
CHFR-210ENST00000535527 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
CHFR-210ENST00000535527 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
CHFR-210ENST00000535527 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
CHFR-210ENST00000535527 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
CHFR-210ENST00000535527 PPP2R1AP30153 589 aa17.84■□□□□ 0.45
CHFR-210ENST00000535527 MTHFSP49914 203 aa17.84■□□□□ 0.45
CHFR-210ENST00000535527 TNS2Q63HR2 1409 aa17.83■□□□□ 0.45
CHFR-210ENST00000535527 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
CHFR-210ENST00000535527 DOT1LQ8TEK3 1739 aa17.83■□□□□ 0.44
CHFR-210ENST00000535527 PLSCR1O15162 318 aa17.82■□□□□ 0.44
CHFR-210ENST00000535527 EYA1Q99502 592 aa17.81■□□□□ 0.44
CHFR-210ENST00000535527 OVOS2A0A0G2JMS6 1433 aa17.81■□□□□ 0.44
CHFR-210ENST00000535527 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
CHFR-210ENST00000535527 IL13P35225 146 aa17.79■□□□□ 0.44
CHFR-210ENST00000535527 AEBP1Q8IUX7 1158 aa17.79■□□□□ 0.44
CHFR-210ENST00000535527 RGPD3A6NKT7 1758 aaPredicted RBP17.78■□□□□ 0.44
CHFR-210ENST00000535527 RGPD4Q7Z3J3 1758 aa17.78■□□□□ 0.44
CHFR-210ENST00000535527 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
CHFR-210ENST00000535527 ZNF784Q8NCA9 323 aaPredicted RBP17.77■□□□□ 0.44
CHFR-210ENST00000535527 ITGB4P16144 1822 aa17.76■□□□□ 0.43
CHFR-210ENST00000535527 KDRP35968 1356 aa17.76■□□□□ 0.43
CHFR-210ENST00000535527 UTRNP46939 3433 aa17.76■□□□□ 0.43
CHFR-210ENST00000535527 PRKRIP1Q9H875 184 aaPredicted RBP17.75■□□□□ 0.43
CHFR-210ENST00000535527 IL2RBP14784 551 aa17.74■□□□□ 0.43
CHFR-210ENST00000535527 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
CHFR-210ENST00000535527 BCL11BQ9C0K0 894 aaPredicted RBP17.74■□□□□ 0.43
CHFR-210ENST00000535527 BTAF1O14981 1849 aa17.73■□□□□ 0.43
CHFR-210ENST00000535527 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
CHFR-210ENST00000535527 CASZ1Q86V15 1759 aa17.72■□□□□ 0.43
CHFR-210ENST00000535527 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
CHFR-210ENST00000535527 ADAMTS7Q9UKP4 1686 aa17.71■□□□□ 0.43
CHFR-210ENST00000535527 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
CHFR-210ENST00000535527 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
CHFR-210ENST00000535527 SCN11AQ9UI33 1791 aa17.71■□□□□ 0.43
CHFR-210ENST00000535527 PTGER2P43116 358 aa17.7■□□□□ 0.42
CHFR-210ENST00000535527 DDB1Q16531 1140 aa17.7■□□□□ 0.42
CHFR-210ENST00000535527 MYBBP1AQ9BQG0 1328 aaKnown RBP17.7■□□□□ 0.42
CHFR-210ENST00000535527 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
CHFR-210ENST00000535527 RALBP1Q15311 655 aa17.69■□□□□ 0.42
CHFR-210ENST00000535527 BCL9O00512 1426 aa17.69■□□□□ 0.42
CHFR-210ENST00000535527 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 ZBTB7AO95365 584 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 HMOX1P09601 288 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 C1QTNF8P60827 252 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 PROM2Q8N271 834 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 KAT6BQ8WYB5 2073 aa17.68■□□□□ 0.42
CHFR-210ENST00000535527 CYP27B1O15528 508 aa17.67■□□□□ 0.42
CHFR-210ENST00000535527 SULT6B1Q6IMI4 303 aa17.67■□□□□ 0.42
CHFR-210ENST00000535527 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
CHFR-210ENST00000535527 PDGFDQ9GZP0 370 aaPredicted RBP17.67■□□□□ 0.42
CHFR-210ENST00000535527 CHD4Q14839 1912 aa17.66■□□□□ 0.42
CHFR-210ENST00000535527 STK32BQ9NY57 414 aa17.66■□□□□ 0.42
CHFR-210ENST00000535527 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
CHFR-210ENST00000535527 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
CHFR-210ENST00000535527 SLC15A2Q16348 729 aa17.65■□□□□ 0.42
CHFR-210ENST00000535527 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
CHFR-210ENST00000535527 FHDC1Q9C0D6 1143 aaPredicted RBP17.65■□□□□ 0.42
CHFR-210ENST00000535527 MTFR1LQ9H019 292 aa17.65■□□□□ 0.42
CHFR-210ENST00000535527 ATF5Q9Y2D1 282 aaPredicted RBP17.65■□□□□ 0.42
CHFR-210ENST00000535527 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
CHFR-210ENST00000535527 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
CHFR-210ENST00000535527 LY75O60449 1722 aa17.64■□□□□ 0.41
CHFR-210ENST00000535527 EXOC5O00471 708 aa17.63■□□□□ 0.41
CHFR-210ENST00000535527 TXNRD1Q16881 649 aa17.63■□□□□ 0.41
CHFR-210ENST00000535527 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
CHFR-210ENST00000535527 RSPH6AQ9H0K4 717 aa17.63■□□□□ 0.41
CHFR-210ENST00000535527 PAPPAQ13219 1627 aa17.62■□□□□ 0.41
CHFR-210ENST00000535527 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
CHFR-210ENST00000535527 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
CHFR-210ENST00000535527 SGIP1Q9BQI5 828 aa17.62■□□□□ 0.41
CHFR-210ENST00000535527 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
CHFR-210ENST00000535527 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
CHFR-210ENST00000535527 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
CHFR-210ENST00000535527 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
CHFR-210ENST00000535527 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
CHFR-210ENST00000535527 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
CHFR-210ENST00000535527 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
CHFR-210ENST00000535527 ARXQ96QS3 562 aa17.59■□□□□ 0.41
CHFR-210ENST00000535527 MRC1P22897 1456 aa17.58■□□□□ 0.41
CHFR-210ENST00000535527 PHKG2P15735 406 aa17.58■□□□□ 0.4
CHFR-210ENST00000535527 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
CHFR-210ENST00000535527 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
CHFR-210ENST00000535527 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
CHFR-210ENST00000535527 MTHFSDQ2M296 383 aaKnown RBP17.57■□□□□ 0.4
CHFR-210ENST00000535527 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
CHFR-210ENST00000535527 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHFR-210ENST00000535527 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
CHFR-210ENST00000535527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHFR-210ENST00000535527 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
CHFR-210ENST00000535527 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
CHFR-210ENST00000535527 ZNF530Q6P9A1 599 aaPredicted RBP17.55■□□□□ 0.4
CHFR-210ENST00000535527 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
CHFR-210ENST00000535527 GPR162Q16538 588 aa17.53■□□□□ 0.4
CHFR-210ENST00000535527 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
CHFR-210ENST00000535527 TJP1Q07157 1748 aa17.52■□□□□ 0.4
CHFR-210ENST00000535527 CEP350Q5VT06 3117 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms