RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
MCF2L-232ENST00000535094 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
MCF2L-232ENST00000535094 LRSAM1Q6UWE0 723 aa19.27■□□□□ 0.68
MCF2L-232ENST00000535094 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.68
MCF2L-232ENST00000535094 AK9Q5TCS8 1911 aa19.27■□□□□ 0.68
MCF2L-232ENST00000535094 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.68
MCF2L-232ENST00000535094 ATP7AQ04656 1500 aa19.27■□□□□ 0.67
MCF2L-232ENST00000535094 GOLGA6L4A6NEF3 574 aa19.27■□□□□ 0.67
MCF2L-232ENST00000535094 PHF14O94880 888 aa19.27■□□□□ 0.67
MCF2L-232ENST00000535094 DDIT3P35638 169 aa19.26■□□□□ 0.67
MCF2L-232ENST00000535094 ZKSCAN5Q9Y2L8 839 aa19.26■□□□□ 0.67
MCF2L-232ENST00000535094 AMPHP49418 695 aa19.26■□□□□ 0.67
MCF2L-232ENST00000535094 TTC12Q9H892 705 aaPredicted RBP19.26■□□□□ 0.67
MCF2L-232ENST00000535094 SURF6O75683 361 aaKnown RBP19.25■□□□□ 0.67
MCF2L-232ENST00000535094 GNAI2P04899 355 aa19.25■□□□□ 0.67
MCF2L-232ENST00000535094 PDE1AP54750 535 aa19.25■□□□□ 0.67
MCF2L-232ENST00000535094 LRRCC1Q9C099 1032 aa19.25■□□□□ 0.67
MCF2L-232ENST00000535094 RNF17Q9BXT8 1623 aaKnown RBP19.25■□□□□ 0.67
MCF2L-232ENST00000535094 ABCC1P33527 1531 aa19.25■□□□□ 0.67
MCF2L-232ENST00000535094 NPATQ14207 1427 aa19.25■□□□□ 0.67
MCF2L-232ENST00000535094 ZNF445P59923 1031 aa19.24■□□□□ 0.67
MCF2L-232ENST00000535094 G2E3Q7L622 706 aa19.24■□□□□ 0.67
MCF2L-232ENST00000535094 CHAF1AQ13111 956 aaPredicted RBP19.24■□□□□ 0.67
MCF2L-232ENST00000535094 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
MCF2L-232ENST00000535094 FOXO3O43524 673 aa19.23■□□□□ 0.67
MCF2L-232ENST00000535094 SLC52A1Q9NWF4 448 aa19.23■□□□□ 0.67
MCF2L-232ENST00000535094 IQSEC2Q5JU85 1478 aa19.23■□□□□ 0.67
MCF2L-232ENST00000535094 HCLS1P14317 486 aaPredicted RBP19.23■□□□□ 0.67
MCF2L-232ENST00000535094 NOL7Q9UMY1 257 aaKnown RBP19.23■□□□□ 0.67
MCF2L-232ENST00000535094 SMC3Q9UQE7 1217 aa19.23■□□□□ 0.67
MCF2L-232ENST00000535094 GADD45BO75293 160 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-232ENST00000535094 ZHX1Q9UKY1 873 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-232ENST00000535094 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
MCF2L-232ENST00000535094 MX1P20591 662 aa19.22■□□□□ 0.67
MCF2L-232ENST00000535094 NUDT16Q96DE0 195 aaKnown RBP19.22■□□□□ 0.67
MCF2L-232ENST00000535094 JARID2Q92833 1246 aaPredicted RBP19.22■□□□□ 0.67
MCF2L-232ENST00000535094 PALD1Q9ULE6 856 aa19.22■□□□□ 0.67
MCF2L-232ENST00000535094 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
MCF2L-232ENST00000535094 HSP90AB2PQ58FF8 381 aa19.21■□□□□ 0.67
MCF2L-232ENST00000535094 ABCC4O15439 1325 aa19.21■□□□□ 0.67
MCF2L-232ENST00000535094 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
MCF2L-232ENST00000535094 MSH6P52701 1360 aa19.21■□□□□ 0.67
MCF2L-232ENST00000535094 CEP152O94986 1710 aa19.21■□□□□ 0.67
MCF2L-232ENST00000535094 USP48Q86UV5 1035 aa19.2■□□□□ 0.66
MCF2L-232ENST00000535094 MYOM1P52179 1685 aa19.2■□□□□ 0.66
MCF2L-232ENST00000535094 IL13P35225 146 aa19.2■□□□□ 0.66
MCF2L-232ENST00000535094 CWC27Q6UX04 472 aaKnown RBP19.2■□□□□ 0.66
MCF2L-232ENST00000535094 MYOM2P54296 1465 aa19.2■□□□□ 0.66
MCF2L-232ENST00000535094 CBX1P83916 185 aa19.19■□□□□ 0.66
MCF2L-232ENST00000535094 FERMT3Q86UX7 667 aa19.19■□□□□ 0.66
MCF2L-232ENST00000535094 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.19■□□□□ 0.66
MCF2L-232ENST00000535094 CNPY2Q9Y2B0 182 aa19.19■□□□□ 0.66
MCF2L-232ENST00000535094 UBTFL1P0CB47 393 aaPredicted RBP19.18■□□□□ 0.66
MCF2L-232ENST00000535094 CPA1P15085 419 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 LRRFIP2Q9Y608 721 aaKnown RBP19.18■□□□□ 0.66
MCF2L-232ENST00000535094 SASS6Q6UVJ0 657 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 SPG7Q9UQ90 795 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 ZFYVE16Q7Z3T8 1539 aa19.18■□□□□ 0.66
MCF2L-232ENST00000535094 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
MCF2L-232ENST00000535094 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 CCDC9Q9Y3X0 531 aaKnown RBP19.17■□□□□ 0.66
MCF2L-232ENST00000535094 ADCY5O95622 1261 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 MAP7D2Q96T17 732 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 DIAPH3Q9NSV4 1193 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 MCM2P49736 904 aa19.17■□□□□ 0.66
MCF2L-232ENST00000535094 WDR33Q9C0J8 1336 aaKnown RBP19.17■□□□□ 0.66
MCF2L-232ENST00000535094 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 FOSBP53539 338 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 FGD1P98174 961 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 CAMK4Q16566 473 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
MCF2L-232ENST00000535094 PUS7Q96PZ0 661 aaKnown RBP19.15■□□□□ 0.66
MCF2L-232ENST00000535094 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
MCF2L-232ENST00000535094 CCT4P50991 539 aaKnown RBP19.15■□□□□ 0.66
MCF2L-232ENST00000535094 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
MCF2L-232ENST00000535094 FBXW7Q969H0 707 aa19.15■□□□□ 0.66
MCF2L-232ENST00000535094 GNAI3P08754 354 aa19.14■□□□□ 0.66
MCF2L-232ENST00000535094 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.66
MCF2L-232ENST00000535094 NCOA3Q9Y6Q9 1424 aa19.14■□□□□ 0.65
MCF2L-232ENST00000535094 KIF1BO60333 1816 aa19.13■□□□□ 0.65
MCF2L-232ENST00000535094 SPDYE4A6NLX3 237 aa19.13■□□□□ 0.65
MCF2L-232ENST00000535094 WASLO00401 505 aaPredicted RBP19.13■□□□□ 0.65
MCF2L-232ENST00000535094 ASXL2Q76L83 1435 aa19.13■□□□□ 0.65
MCF2L-232ENST00000535094 PNMA6EA0A0J9YXQ4 647 aa19.13■□□□□ 0.65
MCF2L-232ENST00000535094 TET3O43151 1660 aa19.13■□□□□ 0.65
MCF2L-232ENST00000535094 SRGAP3O43295 1099 aa19.12■□□□□ 0.65
MCF2L-232ENST00000535094 IGSF3O75054 1194 aa19.12■□□□□ 0.65
MCF2L-232ENST00000535094 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
MCF2L-232ENST00000535094 A0A0U1RQG5 324 aaPredicted RBP19.11■□□□□ 0.65
MCF2L-232ENST00000535094 FLIIQ13045 1269 aa19.11■□□□□ 0.65
MCF2L-232ENST00000535094 UNC5CLQ8IV45 518 aa19.11■□□□□ 0.65
MCF2L-232ENST00000535094 YTHDC2Q9H6S0 1430 aaKnown RBP19.11■□□□□ 0.65
MCF2L-232ENST00000535094 ANXA1P04083 346 aa19.11■□□□□ 0.65
MCF2L-232ENST00000535094 CHMLP26374 656 aa19.11■□□□□ 0.65
MCF2L-232ENST00000535094 STK3Q13188 491 aa19.11■□□□□ 0.65
MCF2L-232ENST00000535094 RIMS2Q9UQ26 1411 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms