RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 SPACA7Q96KW9 195 aa10.55□□□□□ -0.72
SCARNA9-201ENST00000530422 TINF2Q9BSI4 451 aa10.55□□□□□ -0.72
SCARNA9-201ENST00000530422 PRR14Q9BWN1 585 aa10.55□□□□□ -0.72
SCARNA9-201ENST00000530422 PRKAG2Q9UGJ0 569 aa10.55□□□□□ -0.72
SCARNA9-201ENST00000530422 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
SCARNA9-201ENST00000530422 GFRA3O60609 400 aa10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 MRPL58Q14197 206 aaKnown RBP10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 RALBP1Q15311 655 aa10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 SGSM3Q96HU1 749 aa10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 ASB16Q96NS5 453 aa10.54□□□□□ -0.72
SCARNA9-201ENST00000530422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 FAM196BA6NMK8 535 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 ACTN4O43707 911 aaKnown RBP10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 ATP2B1P20020 1258 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 FAM193AP78312 1265 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 FAM69CQ0P6D2 419 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 C9orf131Q5VYM1 1079 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 DHX38Q92620 1227 aaKnown RBP10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 BRINP2Q9C0B6 783 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 UBA5Q9GZZ9 404 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 NLRP2Q9NX02 1062 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 CCDC180Q9P1Z9 1646 aa10.53□□□□□ -0.72
SCARNA9-201ENST00000530422 CD46P15529 392 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 ATP2B4P23634 1241 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 PSME1Q06323 249 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 MORC4Q8TE76 937 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 EGFL7Q9UHF1 273 aa10.52□□□□□ -0.73
SCARNA9-201ENST00000530422 IBSPP21815 317 aaPredicted RBP10.51□□□□□ -0.73
SCARNA9-201ENST00000530422 KMT5BQ4FZB7 885 aa10.51□□□□□ -0.73
SCARNA9-201ENST00000530422 SALL2Q9Y467 1007 aaPredicted RBP10.51□□□□□ -0.73
SCARNA9-201ENST00000530422 NDUFV2P19404 249 aa10.5□□□□□ -0.73
SCARNA9-201ENST00000530422 GGCXP38435 758 aa10.5□□□□□ -0.73
SCARNA9-201ENST00000530422 C1orf216Q8TAB5 229 aa10.5□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L15C9J2P7 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L10C9JJH3 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L13C9JLJ4 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L11C9JVI0 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L21D6R901 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L18D6R9N7 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L22D6RA61 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L17D6RBQ6 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L19D6RCP7 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L20D6RJB6 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 RNF223E7ERA6 249 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 PARNO95453 639 aaKnown RBP10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L24Q0WX57 530 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 EAPPQ56P03 285 aaPredicted RBP10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 EMID1Q96A84 441 aaPredicted RBP10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 VTI1AQ96AJ9 217 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
SCARNA9-201ENST00000530422 PPEF1O14829 653 aaPredicted RBP10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 MAPK1P28482 360 aa10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 GTF2F1P35269 517 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 EIF4G2P78344 907 aaKnown RBP eCLIP10.48□□□□□ -0.732e-21■■■■□ 23.2
SCARNA9-201ENST00000530422 ZSCAN29Q8IWY8 852 aaPredicted RBP10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 NME8Q8N427 588 aa10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 NFATC2IPQ8NCF5 419 aa10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 PIF1Q9H611 641 aa10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 KCNG1Q9UIX4 513 aa10.48□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L3A6NCW0 530 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L4A6NCW7 530 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 CLGNO14967 610 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 S1PR4O95977 384 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 CTDSPL2Q05D32 466 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 LAPTM4AQ15012 233 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 LDLRAD1Q5T700 205 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L2Q6R6M4 530 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 USP17L1Q7RTZ2 530 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 METTL16Q86W50 562 aaKnown RBP10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 PLEKHM2Q8IWE5 1019 aa10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 ZNF622Q969S3 477 aaKnown RBP eCLIP10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
SCARNA9-201ENST00000530422 MAP4K4O95819 1239 aaPredicted RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 FOXD4L6Q3SYB3 417 aaPredicted RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 CRTC2Q53ET0 693 aaPredicted RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 FOXD4L3Q6VB84 417 aaPredicted RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 NT5DC4Q86YG4 428 aa10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 TGIF2Q9GZN2 237 aa10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 DCTN4Q9UJW0 460 aa10.46□□□□□ -0.73
SCARNA9-201ENST00000530422 HSP90AB2PQ58FF8 381 aa10.45□□□□□ -0.74
SCARNA9-201ENST00000530422 SMC5Q8IY18 1101 aa10.45□□□□□ -0.74
SCARNA9-201ENST00000530422 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
SCARNA9-201ENST00000530422 IQSEC3Q9UPP2 1182 aaPredicted RBP10.45□□□□□ -0.74
SCARNA9-201ENST00000530422 CCDC194A0A1B0GVG4 234 aa10.44□□□□□ -0.74
SCARNA9-201ENST00000530422 H3BRB1 525 aa10.44□□□□□ -0.74
SCARNA9-201ENST00000530422 NRG2O14511 850 aaPredicted RBP10.44□□□□□ -0.74
SCARNA9-201ENST00000530422 TCEAL1Q15170 157 aa10.44□□□□□ -0.74
SCARNA9-201ENST00000530422 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
SCARNA9-201ENST00000530422 TSHZ1Q6ZSZ6 1077 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms