RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
SDHD-211ENST00000525987 GOLGB1Q14789 3259 aaKnown RBP17.54■□□□□ 0.4
SDHD-211ENST00000525987 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
SDHD-211ENST00000525987 AMPHP49418 695 aa17.54■□□□□ 0.4
SDHD-211ENST00000525987 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
SDHD-211ENST00000525987 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
SDHD-211ENST00000525987 HSP90AB2PQ58FF8 381 aa17.53■□□□□ 0.4
SDHD-211ENST00000525987 PTGER2P43116 358 aa17.52■□□□□ 0.4
SDHD-211ENST00000525987 SLC15A2Q16348 729 aa17.52■□□□□ 0.4
SDHD-211ENST00000525987 DDX54Q8TDD1 881 aaKnown RBP17.52■□□□□ 0.4
SDHD-211ENST00000525987 SPON1Q9HCB6 807 aa17.52■□□□□ 0.4
SDHD-211ENST00000525987 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
SDHD-211ENST00000525987 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
SDHD-211ENST00000525987 INSRP06213 1382 aa17.51■□□□□ 0.39
SDHD-211ENST00000525987 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
SDHD-211ENST00000525987 SGIP1Q9BQI5 828 aa17.5■□□□□ 0.39
SDHD-211ENST00000525987 EMILIN1Q9Y6C2 1016 aa17.5■□□□□ 0.39
SDHD-211ENST00000525987 KCNQ4P56696 695 aa17.48■□□□□ 0.39
SDHD-211ENST00000525987 CDCA8Q53HL2 280 aa17.48■□□□□ 0.39
SDHD-211ENST00000525987 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
SDHD-211ENST00000525987 FLT4P35916 1363 aa17.48■□□□□ 0.39
SDHD-211ENST00000525987 C5P01031 1676 aa17.48■□□□□ 0.39
SDHD-211ENST00000525987 PRIM1P49642 420 aaKnown RBP17.47■□□□□ 0.39
SDHD-211ENST00000525987 STK32BQ9NY57 414 aa17.47■□□□□ 0.39
SDHD-211ENST00000525987 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
SDHD-211ENST00000525987 KIF24Q5T7B8 1368 aa17.47■□□□□ 0.39
SDHD-211ENST00000525987 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
SDHD-211ENST00000525987 HSPA5P11021 654 aaKnown RBP17.45■□□□□ 0.38
SDHD-211ENST00000525987 CHD4Q14839 1912 aa17.43■□□□□ 0.38
SDHD-211ENST00000525987 SMG6Q86US8 1419 aaKnown RBP17.43■□□□□ 0.38
SDHD-211ENST00000525987 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
SDHD-211ENST00000525987 CYP27B1O15528 508 aa17.42■□□□□ 0.38
SDHD-211ENST00000525987 POLKQ9UBT6 870 aa17.42■□□□□ 0.38
SDHD-211ENST00000525987 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
SDHD-211ENST00000525987 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
SDHD-211ENST00000525987 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
SDHD-211ENST00000525987 PNPLA7Q6ZV29 1317 aa17.41■□□□□ 0.38
SDHD-211ENST00000525987 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
SDHD-211ENST00000525987 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
SDHD-211ENST00000525987 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
SDHD-211ENST00000525987 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
SDHD-211ENST00000525987 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
SDHD-211ENST00000525987 EYA1Q99502 592 aa17.39■□□□□ 0.37
SDHD-211ENST00000525987 TATP17735 454 aaPredicted RBP17.38■□□□□ 0.37
SDHD-211ENST00000525987 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
SDHD-211ENST00000525987 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
SDHD-211ENST00000525987 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
SDHD-211ENST00000525987 C4BP0C0L5 1744 aa17.37■□□□□ 0.37
SDHD-211ENST00000525987 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
SDHD-211ENST00000525987 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
SDHD-211ENST00000525987 PPM1GO15355 546 aaPredicted RBP17.36■□□□□ 0.37
SDHD-211ENST00000525987 CCER1Q8TC90 406 aaPredicted RBP17.36■□□□□ 0.37
SDHD-211ENST00000525987 SYT17Q9BSW7 474 aa17.36■□□□□ 0.37
SDHD-211ENST00000525987 PANK3Q9H999 370 aa17.36■□□□□ 0.37
SDHD-211ENST00000525987 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
SDHD-211ENST00000525987 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
SDHD-211ENST00000525987 NKX1-1Q15270 411 aaPredicted RBP17.34■□□□□ 0.37
SDHD-211ENST00000525987 AMIGO3Q86WK7 504 aa17.34■□□□□ 0.37
SDHD-211ENST00000525987 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
SDHD-211ENST00000525987 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
SDHD-211ENST00000525987 ARXQ96QS3 562 aa17.32■□□□□ 0.36
SDHD-211ENST00000525987 MYH14Q7Z406 1995 aaKnown RBP17.31■□□□□ 0.36
SDHD-211ENST00000525987 PALLDQ8WX93 1383 aa17.31■□□□□ 0.36
SDHD-211ENST00000525987 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
SDHD-211ENST00000525987 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
SDHD-211ENST00000525987 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
SDHD-211ENST00000525987 PIGBQ92521 554 aa17.31■□□□□ 0.36
SDHD-211ENST00000525987 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
SDHD-211ENST00000525987 SCN11AQ9UI33 1791 aa17.3■□□□□ 0.36
SDHD-211ENST00000525987 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
SDHD-211ENST00000525987 YY1P25490 414 aa17.29■□□□□ 0.36
SDHD-211ENST00000525987 SMIM5Q71RC9 77 aa17.29■□□□□ 0.36
SDHD-211ENST00000525987 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
SDHD-211ENST00000525987 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
SDHD-211ENST00000525987 PHKG2P15735 406 aa17.28■□□□□ 0.36
SDHD-211ENST00000525987 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
SDHD-211ENST00000525987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
SDHD-211ENST00000525987 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
SDHD-211ENST00000525987 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
SDHD-211ENST00000525987 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
SDHD-211ENST00000525987 KDM6AO15550 1401 aaPredicted RBP17.25■□□□□ 0.35
SDHD-211ENST00000525987 AEBP1Q8IUX7 1158 aa17.25■□□□□ 0.35
SDHD-211ENST00000525987 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
SDHD-211ENST00000525987 ASAP1Q9ULH1 1129 aa17.25■□□□□ 0.35
SDHD-211ENST00000525987 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
SDHD-211ENST00000525987 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
SDHD-211ENST00000525987 ITPK1Q13572 414 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 MSL1Q68DK7 614 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 C4AP0C0L4 1744 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 TJP1Q07157 1748 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 KIAA1551Q9HCM1 1747 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 KDRP35968 1356 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 PLEKHG2Q9H7P9 1386 aa17.23■□□□□ 0.35
SDHD-211ENST00000525987 PER1O15534 1290 aaPredicted RBP17.22■□□□□ 0.35
SDHD-211ENST00000525987 ATG3Q9NT62 314 aa17.22■□□□□ 0.35
SDHD-211ENST00000525987 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
SDHD-211ENST00000525987 LOC102724428A0A0B4J2F2 783 aa17.21■□□□□ 0.35
SDHD-211ENST00000525987 SIK1P57059 783 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms