RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 PRICKLE2Q7Z3G6 844 aa4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 NANOS1Q8WY41 292 aaKnown RBP4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 TRIM52Q96A61 297 aa4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 PRM3Q9NNZ6 103 aa4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 CUEDC1Q9NWM3 386 aaPredicted RBP4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 TBC1D2BQ9UPU7 963 aa4.96□□□□□ -1.62
SNORA40.9-201ENST00000515895 ATP5J2-PTCD1G3V325 749 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 MEN1O00255 615 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 SCTRP47872 440 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 SV2AQ7L0J3 742 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 LYSMD3Q7Z3D4 306 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 CCDC125Q86Z20 511 aa4.95□□□□□ -1.62
SNORA40.9-201ENST00000515895 ERVK-9P63128 1117 aa4.94□□□□□ -1.62
SNORA40.9-201ENST00000515895 RNF20Q5VTR2 975 aa4.94□□□□□ -1.62
SNORA40.9-201ENST00000515895 WHAMMQ8TF30 809 aa4.94□□□□□ -1.62
SNORA40.9-201ENST00000515895 PCDHB11Q9Y5F2 797 aa4.94□□□□□ -1.62
SNORA40.9-201ENST00000515895 A0A1W2PRU2 124 aa4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 RNF144AP50876 292 aaPredicted RBP4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 MCM6Q14566 821 aa4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 ZNF385CQ66K41 422 aaPredicted RBP4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 CC2D2BQ6DHV5 1058 aa4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 RAB6BQ9NRW1 208 aa4.93□□□□□ -1.62
SNORA40.9-201ENST00000515895 GPR25O00155 361 aa4.92□□□□□ -1.62
SNORA40.9-201ENST00000515895 IRF5Q13568 498 aa4.92□□□□□ -1.62
SNORA40.9-201ENST00000515895 SVOPQ8N4V2 548 aa4.92□□□□□ -1.62
SNORA40.9-201ENST00000515895 OSBPL3Q9H4L5 887 aa4.92□□□□□ -1.62
SNORA40.9-201ENST00000515895 ARHGEF10LQ9HCE6 1279 aa4.92□□□□□ -1.62
SNORA40.9-201ENST00000515895 GSK3AP49840 483 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 EIF4G2P78344 907 aaKnown RBP eCLIP4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 POU4F2Q12837 409 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 GAS6Q14393 721 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 SLC27A3Q5K4L6 730 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 ZNF837Q96EG3 531 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 CDCA7Q9BWT1 371 aaPredicted RBP4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 GDPD2Q9HCC8 539 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 ADAMTS8Q9UP79 889 aa4.91□□□□□ -1.62
SNORA40.9-201ENST00000515895 TRAK2O60296 914 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 ADAMTS2O95450 1211 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 SLURP2P0DP57 97 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 ABL2P42684 1182 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 DBN1Q16643 649 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 RIPOR1Q6ZS17 1223 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 CYP2U1Q7Z449 544 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 NLRP3Q96P20 1036 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 CCDC85AQ96PX6 553 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 GAS2L1Q99501 681 aaPredicted RBP4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 CEP126Q9P2H0 1117 aa4.9□□□□□ -1.63
SNORA40.9-201ENST00000515895 STAU1O95793 577 aaKnown RBP4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 GPC1P35052 558 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 VAC14Q08AM6 782 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 CLN3Q13286 438 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 WASHC4Q2M389 1173 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 TSGA10IPQ3SY00 556 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 LYPD4Q6UWN0 246 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 GRIP2Q9C0E4 1043 aa4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 ESF1Q9H501 851 aaKnown RBP4.89□□□□□ -1.63
SNORA40.9-201ENST00000515895 ARHGEF15O94989 841 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 IL2RAP01589 272 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 KCNMA1Q12791 1236 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 NBPF10Q6P3W6 841 aaKnown RBP4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 TRIM22Q8IYM9 498 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 KCTD17Q8N5Z5 321 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 NBPF15Q8N660 670 aa4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 GTPBP3Q969Y2 492 aaKnown RBP4.88□□□□□ -1.63
SNORA40.9-201ENST00000515895 MYCP01106 439 aaPredicted RBP4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 SRSF11Q05519 484 aaKnown RBP4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 SLFNL1Q499Z3 407 aa4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 CNKSR1Q969H4 720 aa4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 COG6Q9Y2V7 657 aa4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 DYRK1BQ9Y463 629 aa4.87□□□□□ -1.63
SNORA40.9-201ENST00000515895 SPATA31C2B4DYI2 1134 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 WASLO00401 505 aaPredicted RBP4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 CELA2BP08218 269 aaPredicted RBP4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 SOX11P35716 441 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 PHKA2P46019 1235 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 RASSF7Q02833 373 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 CENPCQ03188 943 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 FLIIQ13045 1269 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 TMEM132AQ24JP5 1023 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 RNF135Q8IUD6 432 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 ESYT1Q9BSJ8 1104 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 GPAMQ9HCL2 828 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 TIMMDC1Q9NPL8 285 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 MBIPQ9NS73 344 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 DOLKQ9UPQ8 538 aa4.86□□□□□ -1.63
SNORA40.9-201ENST00000515895 RAD21O60216 631 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 GDF11O95390 407 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 GNRH1P01148 92 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 THBS1P07996 1170 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 IRS1P35568 1242 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 SEMA3FQ13275 785 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 OXLD1Q5BKU9 147 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 TAS1R3Q7RTX0 852 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 WWC1Q8IX03 1113 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 PHTF2Q8N3S3 785 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 IGF1RP08069 1367 aa4.85□□□□□ -1.63
SNORA40.9-201ENST00000515895 H7C1W4 665 aa4.84□□□□□ -1.63
SNORA40.9-201ENST00000515895 RNF225M0QZC1 329 aaPredicted RBP4.84□□□□□ -1.63
SNORA40.9-201ENST00000515895 UBTFP17480 764 aaKnown RBP4.84□□□□□ -1.63
SNORA40.9-201ENST00000515895 MARSP56192 900 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms