RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 CLASRPQ8N2M8 674 aaKnown RBP12.31□□□□□ -0.44
SMG7-215ENST00000515829 GOLGA6L19H0YKK7 550 aa12.31□□□□□ -0.44
SMG7-215ENST00000515829 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 UBE2Q2Q8WVN8 375 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 WASLO00401 505 aaPredicted RBP12.3□□□□□ -0.44
SMG7-215ENST00000515829 BECN2A8MW95 431 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 ATP10AO60312 1499 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
SMG7-215ENST00000515829 GORABQ5T7V8 394 aa12.29□□□□□ -0.44
SMG7-215ENST00000515829 ABCA8O94911 1581 aa12.29□□□□□ -0.44
SMG7-215ENST00000515829 HSP90AB4PQ58FF6 505 aa12.29□□□□□ -0.44
SMG7-215ENST00000515829 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
SMG7-215ENST00000515829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.29□□□□□ -0.441e-5■■■■□ 25.8
SMG7-215ENST00000515829 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
SMG7-215ENST00000515829 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
SMG7-215ENST00000515829 SF3A1Q15459 793 aaKnown RBP12.29□□□□□ -0.44
SMG7-215ENST00000515829 LRRFIP2Q9Y608 721 aaKnown RBP12.29□□□□□ -0.44
SMG7-215ENST00000515829 ANKRD44Q8N8A2 993 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 CHMP4CQ96CF2 233 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 STK3Q13188 491 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 UGGT1Q9NYU2 1555 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 HSP90AB2PQ58FF8 381 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 KIF3AQ9Y496 699 aa12.28□□□□□ -0.44
SMG7-215ENST00000515829 CEBPZQ03701 1054 aaKnown RBP12.27□□□□□ -0.44
SMG7-215ENST00000515829 RNF20Q5VTR2 975 aa12.27□□□□□ -0.44
SMG7-215ENST00000515829 FERMT3Q86UX7 667 aa12.27□□□□□ -0.44
SMG7-215ENST00000515829 SIL1Q9H173 461 aa12.27□□□□□ -0.44
SMG7-215ENST00000515829 TRPM1Q7Z4N2 1603 aa12.27□□□□□ -0.44
SMG7-215ENST00000515829 SASS6Q6UVJ0 657 aa12.27□□□□□ -0.45
SMG7-215ENST00000515829 JAKMIP1Q96N16 626 aaKnown RBP12.27□□□□□ -0.45
SMG7-215ENST00000515829 USP25Q9UHP3 1055 aa12.27□□□□□ -0.45
SMG7-215ENST00000515829 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
SMG7-215ENST00000515829 TAF7LQ5H9L4 462 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 PDE1AP54750 535 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 USP26Q9BXU7 913 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 TRIM5Q9C035 493 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CD2BP2O95400 341 aaKnown RBP12.26□□□□□ -0.45
SMG7-215ENST00000515829 CCDC83Q8IWF9 413 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CDC42BPAQ5VT25 1732 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 TPM4P67936 248 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CEP85Q6P2H3 762 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
SMG7-215ENST00000515829 CFAP65Q6ZU64 1925 aaKnown RBP12.26□□□□□ -0.45
SMG7-215ENST00000515829 PSME1Q06323 249 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 FLIIQ13045 1269 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 MAP7D2Q96T17 732 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 ZNF830Q96NB3 372 aaPredicted RBP12.25□□□□□ -0.45
SMG7-215ENST00000515829 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
SMG7-215ENST00000515829 SYNMO15061 1565 aa12.25□□□□□ -0.45
SMG7-215ENST00000515829 CAMK4Q16566 473 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 LARP1BQ659C4 914 aaKnown RBP12.24□□□□□ -0.45
SMG7-215ENST00000515829 LETM1O95202 739 aaPredicted RBP12.24□□□□□ -0.45
SMG7-215ENST00000515829 PDRG1Q9NUG6 133 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 TTC37Q6PGP7 1564 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 PTPRCP08575 1304 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 FOXO3O43524 673 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 PLEKHF1Q96S99 279 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 TMX4Q9H1E5 349 aaPredicted RBP12.24□□□□□ -0.45
SMG7-215ENST00000515829 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
SMG7-215ENST00000515829 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
SMG7-215ENST00000515829 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
SMG7-215ENST00000515829 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
SMG7-215ENST00000515829 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
SMG7-215ENST00000515829 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
SMG7-215ENST00000515829 DDX58O95786 925 aaKnown RBP12.23□□□□□ -0.45
SMG7-215ENST00000515829 AACSQ86V21 672 aa12.23□□□□□ -0.45
SMG7-215ENST00000515829 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
SMG7-215ENST00000515829 NEUROD6Q96NK8 337 aa12.23□□□□□ -0.45
SMG7-215ENST00000515829 PKP1Q13835 747 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 DNAJC2Q99543 621 aaKnown RBP12.22□□□□□ -0.45
SMG7-215ENST00000515829 GSPT1P15170 499 aaKnown RBP12.22□□□□□ -0.45
SMG7-215ENST00000515829 DTNBO60941 627 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 PSMA5P28066 241 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
SMG7-215ENST00000515829 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 ATP7AQ04656 1500 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 ESYT1Q9BSJ8 1104 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
SMG7-215ENST00000515829 G2E3Q7L622 706 aa12.21□□□□□ -0.45
SMG7-215ENST00000515829 ANXA1P04083 346 aa12.21□□□□□ -0.45
SMG7-215ENST00000515829 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
SMG7-215ENST00000515829 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.45
SMG7-215ENST00000515829 ZNF518AQ6AHZ1 1483 aa12.21□□□□□ -0.46
SMG7-215ENST00000515829 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.46
SMG7-215ENST00000515829 MTERF4Q7Z6M4 381 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms