RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 CCDC125Q86Z20 511 aa18.06■□□□□ 0.48
ABCC3-216ENST00000515585 COL5A2P05997 1499 aaPredicted RBP18.06■□□□□ 0.48
ABCC3-216ENST00000515585 ZNF853P0CG23 659 aa18.05■□□□□ 0.48
ABCC3-216ENST00000515585 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
ABCC3-216ENST00000515585 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
ABCC3-216ENST00000515585 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
ABCC3-216ENST00000515585 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
ABCC3-216ENST00000515585 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
ABCC3-216ENST00000515585 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
ABCC3-216ENST00000515585 PLCH1Q4KWH8 1693 aa18.03■□□□□ 0.48
ABCC3-216ENST00000515585 USP21Q9UK80 565 aa18.03■□□□□ 0.48
ABCC3-216ENST00000515585 TRPC5Q9UL62 973 aaPredicted RBP18.03■□□□□ 0.48
ABCC3-216ENST00000515585 SIPA1L3O60292 1781 aaPredicted RBP18.03■□□□□ 0.48
ABCC3-216ENST00000515585 CRB1P82279 1406 aa18.03■□□□□ 0.48
ABCC3-216ENST00000515585 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
ABCC3-216ENST00000515585 GAS2L2Q8NHY3 880 aa18.02■□□□□ 0.48
ABCC3-216ENST00000515585 SHANK3Q9BYB0 1731 aa18.02■□□□□ 0.48
ABCC3-216ENST00000515585 WNK3Q9BYP7 1800 aa18.02■□□□□ 0.47
ABCC3-216ENST00000515585 FANCIQ9NVI1 1328 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 USHBP1Q8N6Y0 703 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 MYH16Q9H6N6 1097 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 EP400Q96L91 3159 aa18.01■□□□□ 0.47
ABCC3-216ENST00000515585 SCN11AQ9UI33 1791 aa18■□□□□ 0.47
ABCC3-216ENST00000515585 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
ABCC3-216ENST00000515585 IFT57Q9NWB7 429 aa18■□□□□ 0.47
ABCC3-216ENST00000515585 WDR17Q8IZU2 1322 aa17.99■□□□□ 0.47
ABCC3-216ENST00000515585 OVOS2A0A0G2JMS6 1433 aa17.99■□□□□ 0.47
ABCC3-216ENST00000515585 MEGF6O75095 1541 aa17.99■□□□□ 0.47
ABCC3-216ENST00000515585 CALD1Q05682 793 aaKnown RBP17.99■□□□□ 0.47
ABCC3-216ENST00000515585 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
ABCC3-216ENST00000515585 KDM3BQ7LBC6 1761 aa17.99■□□□□ 0.47
ABCC3-216ENST00000515585 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
ABCC3-216ENST00000515585 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
ABCC3-216ENST00000515585 MAP3K5Q99683 1374 aa17.98■□□□□ 0.47
ABCC3-216ENST00000515585 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
ABCC3-216ENST00000515585 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
ABCC3-216ENST00000515585 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
ABCC3-216ENST00000515585 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
ABCC3-216ENST00000515585 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
ABCC3-216ENST00000515585 GNAI1P63096 354 aa17.96■□□□□ 0.47
ABCC3-216ENST00000515585 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
ABCC3-216ENST00000515585 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
ABCC3-216ENST00000515585 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
ABCC3-216ENST00000515585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.95■□□□□ 0.46
ABCC3-216ENST00000515585 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
ABCC3-216ENST00000515585 GNAT3A8MTJ3 354 aa17.93■□□□□ 0.46
ABCC3-216ENST00000515585 CHL1O00533 1208 aa17.93■□□□□ 0.46
ABCC3-216ENST00000515585 DCTN1Q14203 1278 aa17.93■□□□□ 0.46
ABCC3-216ENST00000515585 FKBP8Q14318 412 aa17.93■□□□□ 0.46
ABCC3-216ENST00000515585 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
ABCC3-216ENST00000515585 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
ABCC3-216ENST00000515585 MBIPQ9NS73 344 aa17.92■□□□□ 0.46
ABCC3-216ENST00000515585 NLRP2Q9NX02 1062 aa17.92■□□□□ 0.46
ABCC3-216ENST00000515585 MRC1P22897 1456 aa17.92■□□□□ 0.46
ABCC3-216ENST00000515585 SLIT2O94813 1529 aa17.92■□□□□ 0.46
ABCC3-216ENST00000515585 DISP2A7MBM2 1401 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 ATRNO75882 1429 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 NEFLP07196 543 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
ABCC3-216ENST00000515585 EXOSC9Q06265 439 aaKnown RBP17.91■□□□□ 0.46
ABCC3-216ENST00000515585 AKAP4Q5JQC9 854 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 MCM10Q7L590 875 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
ABCC3-216ENST00000515585 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.9■□□□□ 0.46
ABCC3-216ENST00000515585 RARSP54136 660 aaKnown RBP17.9■□□□□ 0.46
ABCC3-216ENST00000515585 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
ABCC3-216ENST00000515585 CACNA1FO60840 1977 aa17.9■□□□□ 0.46
ABCC3-216ENST00000515585 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
ABCC3-216ENST00000515585 DEFB132Q7Z7B7 95 aa17.88■□□□□ 0.45
ABCC3-216ENST00000515585 ZNF428Q96B54 188 aa17.88■□□□□ 0.45
ABCC3-216ENST00000515585 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
ABCC3-216ENST00000515585 TATP17735 454 aaPredicted RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 BRPF1P55201 1214 aaPredicted RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
ABCC3-216ENST00000515585 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 GJD4Q96KN9 370 aaPredicted RBP17.87■□□□□ 0.45
ABCC3-216ENST00000515585 BTG4Q9NY30 223 aa17.86■□□□□ 0.45
ABCC3-216ENST00000515585 VAMP4O75379 141 aa17.85■□□□□ 0.45
ABCC3-216ENST00000515585 BCAR3O75815 825 aa17.85■□□□□ 0.45
ABCC3-216ENST00000515585 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
ABCC3-216ENST00000515585 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
ABCC3-216ENST00000515585 IRX6P78412 446 aaPredicted RBP17.84■□□□□ 0.45
ABCC3-216ENST00000515585 ALDH1L2Q3SY69 923 aa17.84■□□□□ 0.45
ABCC3-216ENST00000515585 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
ABCC3-216ENST00000515585 PAPPAQ13219 1627 aa17.83■□□□□ 0.45
ABCC3-216ENST00000515585 PHKG2P15735 406 aa17.83■□□□□ 0.44
ABCC3-216ENST00000515585 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
ABCC3-216ENST00000515585 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
ABCC3-216ENST00000515585 LGR6Q9HBX8 967 aa17.83■□□□□ 0.44
ABCC3-216ENST00000515585 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
ABCC3-216ENST00000515585 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
ABCC3-216ENST00000515585 CYP27B1O15528 508 aa17.82■□□□□ 0.44
ABCC3-216ENST00000515585 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
ABCC3-216ENST00000515585 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
ABCC3-216ENST00000515585 GLI3P10071 1580 aa17.82■□□□□ 0.44
ABCC3-216ENST00000515585 UBR2Q8IWV8 1755 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms