RNA–Protein interactions for RNA: ENST00000508183.5

SH3TC1-214, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 1,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-214ENST00000508183 PRKRIP1Q9H875 184 aaPredicted RBP25.27■■□□□ 1.64
SH3TC1-214ENST00000508183 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
SH3TC1-214ENST00000508183 NBPF14Q5TI25 921 aa25.25■■□□□ 1.63
SH3TC1-214ENST00000508183 NBPF6Q5VWK0 638 aa25.23■■□□□ 1.63
SH3TC1-214ENST00000508183 NBPF4Q96M43 638 aa25.23■■□□□ 1.63
SH3TC1-214ENST00000508183 SBF2Q86WG5 1849 aa25.23■■□□□ 1.63
SH3TC1-214ENST00000508183 RREB1Q92766 1687 aa25.23■■□□□ 1.63
SH3TC1-214ENST00000508183 PLSCR1O15162 318 aa25.22■■□□□ 1.63
SH3TC1-214ENST00000508183 NCAPD2Q15021 1401 aa25.21■■□□□ 1.63
SH3TC1-214ENST00000508183 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
SH3TC1-214ENST00000508183 IL13P35225 146 aa25.2■■□□□ 1.62
SH3TC1-214ENST00000508183 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
SH3TC1-214ENST00000508183 NUP188Q5SRE5 1749 aa25.19■■□□□ 1.62
SH3TC1-214ENST00000508183 RGPD3A6NKT7 1758 aaPredicted RBP25.19■■□□□ 1.62
SH3TC1-214ENST00000508183 RGPD4Q7Z3J3 1758 aa25.19■■□□□ 1.62
SH3TC1-214ENST00000508183 USHBP1Q8N6Y0 703 aa25.19■■□□□ 1.62
SH3TC1-214ENST00000508183 EYA1Q99502 592 aa25.19■■□□□ 1.62
SH3TC1-214ENST00000508183 LRP5O75197 1615 aa25.18■■□□□ 1.62
SH3TC1-214ENST00000508183 IGSF1Q8N6C5 1336 aa25.16■■□□□ 1.62
SH3TC1-214ENST00000508183 DDX54Q8TDD1 881 aaKnown RBP25.15■■□□□ 1.62
SH3TC1-214ENST00000508183 ACSBG1Q96GR2 724 aa25.15■■□□□ 1.62
SH3TC1-214ENST00000508183 MEGF6O75095 1541 aa25.14■■□□□ 1.62
SH3TC1-214ENST00000508183 DIAPH1O60610 1272 aaKnown RBP25.14■■□□□ 1.62
SH3TC1-214ENST00000508183 KCNQ2O43526 872 aa25.13■■□□□ 1.61
SH3TC1-214ENST00000508183 NHSQ6T4R5 1651 aa25.12■■□□□ 1.61
SH3TC1-214ENST00000508183 ANP32CO43423 234 aa25.12■■□□□ 1.61
SH3TC1-214ENST00000508183 CFAP53Q96M91 514 aa25.12■■□□□ 1.61
SH3TC1-214ENST00000508183 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
SH3TC1-214ENST00000508183 ZCRB1Q8TBF4 217 aaKnown RBP25.11■■□□□ 1.61
SH3TC1-214ENST00000508183 TXNRD1Q16881 649 aa25.1■■□□□ 1.61
SH3TC1-214ENST00000508183 AEBP1Q8IUX7 1158 aa25.1■■□□□ 1.61
SH3TC1-214ENST00000508183 KDRP35968 1356 aa25.09■■□□□ 1.61
SH3TC1-214ENST00000508183 PROM2Q8N271 834 aa25.07■■□□□ 1.6
SH3TC1-214ENST00000508183 TATP17735 454 aaPredicted RBP25.06■■□□□ 1.6
SH3TC1-214ENST00000508183 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
SH3TC1-214ENST00000508183 SULT6B1Q6IMI4 303 aa25.05■■□□□ 1.6
SH3TC1-214ENST00000508183 ANO8Q9HCE9 1232 aaPredicted RBP25.05■■□□□ 1.6
SH3TC1-214ENST00000508183 KAT6BQ8WYB5 2073 aa25.05■■□□□ 1.6
SH3TC1-214ENST00000508183 U2SURPO15042 1029 aaKnown RBP25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 CCDC184Q52MB2 194 aa25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 DIEXFQ68CQ4 756 aaKnown RBP25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 SYTL4Q96C24 671 aaPredicted RBP25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 PKD1L3Q7Z443 1732 aa25.04■■□□□ 1.6
SH3TC1-214ENST00000508183 HMOX1P09601 288 aa25.03■■□□□ 1.6
SH3TC1-214ENST00000508183 BTAF1O14981 1849 aa25.02■■□□□ 1.6
SH3TC1-214ENST00000508183 SPON1Q9HCB6 807 aa25.01■■□□□ 1.59
SH3TC1-214ENST00000508183 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
SH3TC1-214ENST00000508183 PCDH11XQ9BZA7 1347 aa25■■□□□ 1.59
SH3TC1-214ENST00000508183 PCDH11YQ9BZA8 1340 aa25■■□□□ 1.59
SH3TC1-214ENST00000508183 PRIM1P49642 420 aaKnown RBP24.99■■□□□ 1.59
SH3TC1-214ENST00000508183 PLEKHG2Q9H7P9 1386 aa24.98■■□□□ 1.59
SH3TC1-214ENST00000508183 U2AF1L5P0DN76 240 aaPredicted RBP24.98■■□□□ 1.59
SH3TC1-214ENST00000508183 U2AF1Q01081 240 aaKnown RBP eCLIP24.98■■□□□ 1.593e-7■□□□□ 9.6
SH3TC1-214ENST00000508183 SLC15A2Q16348 729 aa24.97■■□□□ 1.59
SH3TC1-214ENST00000508183 DOT1LQ8TEK3 1739 aa24.97■■□□□ 1.59
SH3TC1-214ENST00000508183 RSPH6AQ9H0K4 717 aa24.96■■□□□ 1.59
SH3TC1-214ENST00000508183 PPP1R1BQ9UD71 204 aaPredicted RBP24.96■■□□□ 1.59
SH3TC1-214ENST00000508183 SLC27A3Q5K4L6 730 aa24.95■■□□□ 1.58
SH3TC1-214ENST00000508183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
SH3TC1-214ENST00000508183 CYP27B1O15528 508 aa24.93■■□□□ 1.58
SH3TC1-214ENST00000508183 FCHSD2O94868 740 aa24.92■■□□□ 1.58
SH3TC1-214ENST00000508183 PRKAR2BP31323 418 aa24.92■■□□□ 1.58
SH3TC1-214ENST00000508183 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
SH3TC1-214ENST00000508183 MRS2Q9HD23 443 aa24.91■■□□□ 1.58
SH3TC1-214ENST00000508183 PDGFDQ9GZP0 370 aaPredicted RBP24.9■■□□□ 1.58
SH3TC1-214ENST00000508183 LRRC4BQ9NT99 713 aa24.9■■□□□ 1.58
SH3TC1-214ENST00000508183 CASZ1Q86V15 1759 aa24.9■■□□□ 1.58
SH3TC1-214ENST00000508183 ZBTB7AO95365 584 aa24.89■■□□□ 1.58
SH3TC1-214ENST00000508183 PHACTR3Q96KR7 559 aa24.89■■□□□ 1.58
SH3TC1-214ENST00000508183 AMOTQ4VCS5 1084 aa24.88■■□□□ 1.57
SH3TC1-214ENST00000508183 PLEKHO1Q53GL0 409 aaPredicted RBP24.88■■□□□ 1.57
SH3TC1-214ENST00000508183 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
SH3TC1-214ENST00000508183 PAPPAQ13219 1627 aa24.88■■□□□ 1.57
SH3TC1-214ENST00000508183 WDR43Q15061 677 aaKnown RBP eCLIP24.87■■□□□ 1.57
SH3TC1-214ENST00000508183 MIER1Q8N108 512 aa24.87■■□□□ 1.57
SH3TC1-214ENST00000508183 ADAMTS8Q9UP79 889 aa24.87■■□□□ 1.57
SH3TC1-214ENST00000508183 MTHFSDQ2M296 383 aaKnown RBP24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 PNISRQ8TF01 805 aaKnown RBP24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 PHKG2P15735 406 aa24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 ZNF827Q17R98 1081 aa24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 ZNF530Q6P9A1 599 aaPredicted RBP24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 CCNL1Q9UK58 526 aaPredicted RBP24.86■■□□□ 1.57
SH3TC1-214ENST00000508183 TOGARAM1Q9Y4F4 1720 aa24.85■■□□□ 1.57
SH3TC1-214ENST00000508183 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
SH3TC1-214ENST00000508183 MTFR1LQ9H019 292 aa24.84■■□□□ 1.57
SH3TC1-214ENST00000508183 ATF5Q9Y2D1 282 aaPredicted RBP24.84■■□□□ 1.57
SH3TC1-214ENST00000508183 KCNQ4P56696 695 aa24.83■■□□□ 1.57
SH3TC1-214ENST00000508183 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
SH3TC1-214ENST00000508183 IFNL2Q8IZJ0 200 aa24.83■■□□□ 1.57
SH3TC1-214ENST00000508183 HMGB2P26583 209 aaKnown RBP24.82■■□□□ 1.56
SH3TC1-214ENST00000508183 AKT1S1Q96B36 256 aa24.82■■□□□ 1.56
SH3TC1-214ENST00000508183 TFCP2L1Q9NZI6 479 aa24.82■■□□□ 1.56
SH3TC1-214ENST00000508183 LY75O60449 1722 aa24.81■■□□□ 1.56
SH3TC1-214ENST00000508183 CCER2I3L3R5 266 aa24.81■■□□□ 1.56
SH3TC1-214ENST00000508183 KDM6AO15550 1401 aaPredicted RBP24.81■■□□□ 1.56
SH3TC1-214ENST00000508183 CCDC146Q8IYE0 955 aa24.8■■□□□ 1.56
SH3TC1-214ENST00000508183 PALLDQ8WX93 1383 aa24.8■■□□□ 1.56
SH3TC1-214ENST00000508183 SMARCC1Q92922 1105 aaPredicted RBP24.79■■□□□ 1.56
SH3TC1-214ENST00000508183 PTGER2P43116 358 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms