RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 TRAPPC3LQ5T215 181 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 AEBP1Q8IUX7 1158 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 NFATC2IPQ8NCF5 419 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 KDM5CP41229 1560 aa11.62□□□□□ -0.55
NEK1-203ENST00000507142 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 PLEKHG3A1L390 1219 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 LARP1Q6PKG0 1096 aaKnown RBP11.61□□□□□ -0.55
NEK1-203ENST00000507142 PPP1R42Q7Z4L9 355 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
NEK1-203ENST00000507142 POLKQ9UBT6 870 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 ROBO2Q9HCK4 1378 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 C6orf229H3BNL8 230 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
NEK1-203ENST00000507142 WDR63Q8IWG1 891 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 EYA1Q99502 592 aa11.61□□□□□ -0.55
NEK1-203ENST00000507142 GLI2P10070 1586 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 PIK3C2GO75747 1445 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 ZBED9Q6R2W3 1325 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 TRIM37O94972 964 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 DDX46Q7L014 1031 aaKnown RBP11.6□□□□□ -0.55
NEK1-203ENST00000507142 FAM83GA6ND36 823 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 CCT4P50991 539 aaKnown RBP11.6□□□□□ -0.55
NEK1-203ENST00000507142 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
NEK1-203ENST00000507142 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
NEK1-203ENST00000507142 FAM196AQ6ZSG2 479 aa11.59□□□□□ -0.55
NEK1-203ENST00000507142 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
NEK1-203ENST00000507142 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
NEK1-203ENST00000507142 HYPKQ9NX55 129 aa11.59□□□□□ -0.55
NEK1-203ENST00000507142 GNAI2P04899 355 aa11.59□□□□□ -0.55
NEK1-203ENST00000507142 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
NEK1-203ENST00000507142 TTLL12Q14166 644 aaPredicted RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 CHAF1AQ13111 956 aaPredicted RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 DNAJC2Q99543 621 aaKnown RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 IFT57Q9NWB7 429 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 ZSCAN29Q8IWY8 852 aaPredicted RBP11.58□□□□□ -0.56
NEK1-203ENST00000507142 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 ERC2O15083 957 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 PANK1Q8TE04 598 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
NEK1-203ENST00000507142 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
NEK1-203ENST00000507142 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
NEK1-203ENST00000507142 CRBNQ96SW2 442 aa11.57□□□□□ -0.56
NEK1-203ENST00000507142 NIP7Q9Y221 180 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEK1-203ENST00000507142 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
NEK1-203ENST00000507142 MARCH6O60337 910 aa11.57□□□□□ -0.56
NEK1-203ENST00000507142 ARHGAP31Q2M1Z3 1444 aa11.57□□□□□ -0.56
NEK1-203ENST00000507142 GPR162Q16538 588 aa11.57□□□□□ -0.56
NEK1-203ENST00000507142 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
NEK1-203ENST00000507142 MAP3K4Q9Y6R4 1608 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 KAT6BQ8WYB5 2073 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 RBM6P78332 1123 aaKnown RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 CDC42BPAQ5VT25 1732 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 JCADQ9P266 1359 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 RIMS1Q86UR5 1692 aaKnown RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 ATP5J2-PTCD1G3V325 749 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 PIP4K2AP48426 406 aaPredicted RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 RRP1P56182 461 aaKnown RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
NEK1-203ENST00000507142 RUFY2Q8WXA3 655 aa11.56□□□□□ -0.56
NEK1-203ENST00000507142 IKQ13123 557 aaPredicted RBP11.55□□□□□ -0.56
NEK1-203ENST00000507142 GOLGA6L22H0YM25 854 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 TESK2Q96S53 571 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 C1orf115Q9H7X2 142 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 SBNO1A3KN83 1393 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 TRDNQ13061 729 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
NEK1-203ENST00000507142 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
NEK1-203ENST00000507142 MFAP1P55081 439 aaKnown RBP11.54□□□□□ -0.56
NEK1-203ENST00000507142 ANXA1P04083 346 aa11.54□□□□□ -0.56
NEK1-203ENST00000507142 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
NEK1-203ENST00000507142 AKAP17AQ02040 695 aaKnown RBP11.54□□□□□ -0.56
NEK1-203ENST00000507142 CAVIN4Q5BKX8 364 aa11.54□□□□□ -0.56
NEK1-203ENST00000507142 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
NEK1-203ENST00000507142 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
NEK1-203ENST00000507142 NLRP3Q96P20 1036 aa11.54□□□□□ -0.56
NEK1-203ENST00000507142 ANKRD18BA2A2Z9 1011 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 RNMTO43148 476 aaKnown RBP11.53□□□□□ -0.56
NEK1-203ENST00000507142 GRM1Q13255 1194 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 MSL1Q68DK7 614 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 CDC5LQ99459 802 aaKnown RBP11.53□□□□□ -0.56
NEK1-203ENST00000507142 RAI14Q9P0K7 980 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 TCEAL9Q9UHQ7 104 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 ADGRL3Q9HAR2 1447 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 DIP2CQ9Y2E4 1556 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms