RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 NISCHQ9Y2I1 1504 aa10.96□□□□□ -0.65
NIPBL-205ENST00000505998 CBLBQ13191 982 aa10.96□□□□□ -0.65
NIPBL-205ENST00000505998 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.65
NIPBL-205ENST00000505998 ATP5J2-PTCD1G3V325 749 aa10.95□□□□□ -0.66
NIPBL-205ENST00000505998 ADD1P35611 737 aaKnown RBP10.95□□□□□ -0.66
NIPBL-205ENST00000505998 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
NIPBL-205ENST00000505998 VRTNQ9H8Y1 702 aa10.95□□□□□ -0.66
NIPBL-205ENST00000505998 CYP2U1Q7Z449 544 aa10.94□□□□□ -0.66
NIPBL-205ENST00000505998 TRIM50Q86XT4 487 aa10.94□□□□□ -0.66
NIPBL-205ENST00000505998 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
NIPBL-205ENST00000505998 Q6ZVU0 165 aa10.93□□□□□ -0.66
NIPBL-205ENST00000505998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
NIPBL-205ENST00000505998 AXIN1O15169 862 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 ADH1AP07327 375 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
NIPBL-205ENST00000505998 ATP1A2P50993 1020 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 GTF2IP78347 998 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 KANK4Q5T7N3 995 aaPredicted RBP10.92□□□□□ -0.66
NIPBL-205ENST00000505998 MEIOBQ8N635 442 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 PBXIP1Q96AQ6 731 aa10.92□□□□□ -0.66
NIPBL-205ENST00000505998 RASA1P20936 1047 aa10.9□□□□□ -0.66
NIPBL-205ENST00000505998 PSME1Q06323 249 aa10.9□□□□□ -0.66
NIPBL-205ENST00000505998 LARP1Q6PKG0 1096 aaKnown RBP10.9□□□□□ -0.66
NIPBL-205ENST00000505998 CRIPAKQ8N1N5 446 aa10.9□□□□□ -0.66
NIPBL-205ENST00000505998 AGBL1Q96MI9 1066 aa10.9□□□□□ -0.66
NIPBL-205ENST00000505998 PPP1R15AO75807 674 aaPredicted RBP10.89□□□□□ -0.67
NIPBL-205ENST00000505998 UPP2O95045 317 aa10.89□□□□□ -0.67
NIPBL-205ENST00000505998 RELBQ01201 579 aa10.89□□□□□ -0.67
NIPBL-205ENST00000505998 Q6ZNB5 142 aa10.89□□□□□ -0.67
NIPBL-205ENST00000505998 OGFOD1Q8N543 542 aa10.89□□□□□ -0.67
NIPBL-205ENST00000505998 TSEN34Q9BSV6 310 aaKnown RBP10.89□□□□□ -0.67
NIPBL-205ENST00000505998 DNAAF2Q9NVR5 837 aaKnown RBP10.89□□□□□ -0.67
NIPBL-205ENST00000505998 PCDHGA11Q9Y5H2 935 aa10.89□□□□□ -0.67
NIPBL-205ENST00000505998 SRPK2P78362 688 aaKnown RBP10.88□□□□□ -0.67
NIPBL-205ENST00000505998 AAASQ9NRG9 546 aa10.88□□□□□ -0.67
NIPBL-205ENST00000505998 ST8SIA5O15466 376 aa10.87□□□□□ -0.67
NIPBL-205ENST00000505998 GNRH1P01148 92 aa10.87□□□□□ -0.67
NIPBL-205ENST00000505998 PTGIRP43119 386 aa10.87□□□□□ -0.67
NIPBL-205ENST00000505998 CLDN10P78369 228 aa10.87□□□□□ -0.67
NIPBL-205ENST00000505998 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
NIPBL-205ENST00000505998 FAM196BA6NMK8 535 aa10.86□□□□□ -0.67
NIPBL-205ENST00000505998 CRTC2Q53ET0 693 aaPredicted RBP10.86□□□□□ -0.67
NIPBL-205ENST00000505998 MRPL14Q6P1L8 145 aaKnown RBP10.86□□□□□ -0.67
NIPBL-205ENST00000505998 LARGE2Q8N3Y3 721 aa10.86□□□□□ -0.67
NIPBL-205ENST00000505998 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
NIPBL-205ENST00000505998 RBM19Q9Y4C8 960 aaKnown RBP10.86□□□□□ -0.67
NIPBL-205ENST00000505998 ACIN1Q9UKV3 1341 aaKnown RBP10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L15C9J2P7 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L10C9JJH3 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L13C9JLJ4 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L11C9JVI0 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L21D6R901 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L18D6R9N7 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L22D6RA61 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L17D6RBQ6 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L19D6RCP7 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L20D6RJB6 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 BMP1P13497 986 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 USP17L24Q0WX57 530 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 SCARF1Q14162 830 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 KDF1Q8NAX2 398 aaPredicted RBP10.85□□□□□ -0.67
NIPBL-205ENST00000505998 TPCN2Q8NHX9 752 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
NIPBL-205ENST00000505998 ARHGEF10LQ9HCE6 1279 aa10.85□□□□□ -0.67
NIPBL-205ENST00000505998 ZBTB7BO15156 539 aaPredicted RBP10.84□□□□□ -0.67
NIPBL-205ENST00000505998 BMP2P12643 396 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 PTK7Q13308 1070 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 ESCO1Q5FWF5 840 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 CCDC102BQ68D86 513 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 RAB6BQ9NRW1 208 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
NIPBL-205ENST00000505998 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
NIPBL-205ENST00000505998 STAU1O95793 577 aaKnown RBP10.83□□□□□ -0.68
NIPBL-205ENST00000505998 GDF10P55107 478 aa10.83□□□□□ -0.68
NIPBL-205ENST00000505998 MEN1O00255 615 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 ATG7O95352 703 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 TRIM46Q7Z4K8 759 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 SIX5Q8N196 739 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 PURBQ96QR8 312 aaKnown RBP10.82□□□□□ -0.68
NIPBL-205ENST00000505998 ETNK1Q9HBU6 452 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 ATP13A2Q9NQ11 1180 aa10.82□□□□□ -0.68
NIPBL-205ENST00000505998 SPINT1O43278 529 aa10.81□□□□□ -0.68
NIPBL-205ENST00000505998 SCNN1DP51172 638 aa10.81□□□□□ -0.68
NIPBL-205ENST00000505998 ANKMY2Q8IV38 441 aa10.81□□□□□ -0.68
NIPBL-205ENST00000505998 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
NIPBL-205ENST00000505998 NOVA2Q9UNW9 492 aaKnown RBP10.81□□□□□ -0.68
NIPBL-205ENST00000505998 TMEM229AB2RXF0 380 aa10.8□□□□□ -0.68
NIPBL-205ENST00000505998 INHAP05111 366 aa10.8□□□□□ -0.68
NIPBL-205ENST00000505998 DPYDQ12882 1025 aa10.8□□□□□ -0.68
NIPBL-205ENST00000505998 CLN3Q13286 438 aa10.8□□□□□ -0.68
NIPBL-205ENST00000505998 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
NIPBL-205ENST00000505998 DACH1Q9UI36 760 aa10.8□□□□□ -0.68
NIPBL-205ENST00000505998 WASLO00401 505 aaPredicted RBP10.79□□□□□ -0.68
NIPBL-205ENST00000505998 IL2RAP01589 272 aa10.79□□□□□ -0.68
NIPBL-205ENST00000505998 ELOAQ14241 798 aaKnown RBP10.79□□□□□ -0.68
NIPBL-205ENST00000505998 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
NIPBL-205ENST00000505998 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms