RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CCDC192P0DO97 292 aa19.23■□□□□ 0.67
HMGXB3-202ENST00000503427 MYL6BP14649 208 aa19.23■□□□□ 0.67
HMGXB3-202ENST00000503427 DISP3Q9P2K9 1392 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 HSP90B2PQ58FF3 399 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 DUSP27Q5VZP5 1158 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 CCP110O43303 1012 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 PDILTQ8N807 584 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 EMILIN1Q9Y6C2 1016 aa19.22■□□□□ 0.67
HMGXB3-202ENST00000503427 NKTRP30414 1462 aaKnown RBP19.21■□□□□ 0.67
HMGXB3-202ENST00000503427 SRGAP3O43295 1099 aa19.21■□□□□ 0.67
HMGXB3-202ENST00000503427 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.674e-7■■□□□ 14.5
HMGXB3-202ENST00000503427 TTC39AQ5SRH9 613 aa19.21■□□□□ 0.67
HMGXB3-202ENST00000503427 TCEAL9Q9UHQ7 104 aa19.21■□□□□ 0.67
HMGXB3-202ENST00000503427 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
HMGXB3-202ENST00000503427 TAF7Q15545 349 aaPredicted RBP19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 KRT85P78386 507 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 DHX8Q14562 1220 aaKnown RBP19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 RUFY1Q96T51 708 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 STK38Q15208 465 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 MCM10Q7L590 875 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 AK7Q96M32 723 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 SMC2O95347 1197 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 CCDC57Q2TAC2 916 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
HMGXB3-202ENST00000503427 ABCC10Q5T3U5 1492 aa19.19■□□□□ 0.66
HMGXB3-202ENST00000503427 SHANK2Q9UPX8 1470 aa19.19■□□□□ 0.66
HMGXB3-202ENST00000503427 THUMPD2Q9BTF0 503 aaKnown RBP19.19■□□□□ 0.66
HMGXB3-202ENST00000503427 JMYQ8N9B5 988 aa19.18■□□□□ 0.66
HMGXB3-202ENST00000503427 MAPKBP1O60336 1514 aa19.18■□□□□ 0.66
HMGXB3-202ENST00000503427 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
HMGXB3-202ENST00000503427 FOXO3O43524 673 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 ZSCAN31Q96LW9 406 aaPredicted RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 HMGB2P26583 209 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 FYB1O15117 783 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 SIL1Q9H173 461 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 EIF4G3O43432 1585 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 CDR1P51861 262 aa19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 NAP1L1P55209 391 aaKnown RBP19.17■□□□□ 0.66
HMGXB3-202ENST00000503427 STARD3NLO95772 234 aa19.16■□□□□ 0.66
HMGXB3-202ENST00000503427 LARP1BQ659C4 914 aaKnown RBP19.16■□□□□ 0.66
HMGXB3-202ENST00000503427 FILIP1LQ4L180 1135 aa19.16■□□□□ 0.66
HMGXB3-202ENST00000503427 FMNL2Q96PY5 1086 aa19.16■□□□□ 0.66
HMGXB3-202ENST00000503427 PRAG1Q86YV5 1406 aa19.16■□□□□ 0.66
HMGXB3-202ENST00000503427 ESPNB1AK53 854 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 ERCC4Q92889 916 aaPredicted RBP19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 MPHOSPH8Q99549 860 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 CEP126Q9P2H0 1117 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 ZSCAN25Q6NSZ9 544 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 SPC24Q8NBT2 197 aa19.15■□□□□ 0.66
HMGXB3-202ENST00000503427 AACSQ86V21 672 aa19.14■□□□□ 0.66
HMGXB3-202ENST00000503427 CEBPZQ03701 1054 aaKnown RBP19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 DCTN1Q14203 1278 aa19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 LARP1Q6PKG0 1096 aaKnown RBP19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 BLOC1S2Q6QNY1 142 aa19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 C20orf194Q5TEA3 1177 aa19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 MIS18AQ9NYP9 233 aa19.14■□□□□ 0.65
HMGXB3-202ENST00000503427 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
HMGXB3-202ENST00000503427 ACEP12821 1306 aa19.13■□□□□ 0.65
HMGXB3-202ENST00000503427 NOM1Q5C9Z4 860 aaKnown RBP19.13■□□□□ 0.65
HMGXB3-202ENST00000503427 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
HMGXB3-202ENST00000503427 PDRG1Q9NUG6 133 aa19.13■□□□□ 0.65
HMGXB3-202ENST00000503427 PUS7Q96PZ0 661 aaKnown RBP19.12■□□□□ 0.65
HMGXB3-202ENST00000503427 ATP2B1P20020 1258 aa19.12■□□□□ 0.65
HMGXB3-202ENST00000503427 STK3Q13188 491 aa19.12■□□□□ 0.65
HMGXB3-202ENST00000503427 IL16Q14005 1332 aa19.12■□□□□ 0.65
HMGXB3-202ENST00000503427 OFD1O75665 1012 aa19.12■□□□□ 0.65
HMGXB3-202ENST00000503427 MAP4K4O95819 1239 aaPredicted RBP19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 ME1P48163 572 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 TXLNAP40222 546 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 KIF1BPQ96EK5 621 aa19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 CCDC43Q96MW1 224 aaKnown RBP19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
HMGXB3-202ENST00000503427 KRT32Q14532 448 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 CAGE1Q8TC20 777 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 TMOD3Q9NYL9 352 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 JAKMIP1Q96N16 626 aaKnown RBP19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 CFAP45Q9UL16 551 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 CADPS2Q86UW7 1296 aa19.1■□□□□ 0.65
HMGXB3-202ENST00000503427 KDM4AO75164 1064 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 USHBP1Q8N6Y0 703 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 SPATA32Q96LK8 384 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 EPS15P42566 896 aa19.09■□□□□ 0.65
HMGXB3-202ENST00000503427 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms