RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 CHRNA2Q15822 529 aa8.59□□□□□ -1.03
BRD9-211ENST00000494422 OTUD5Q96G74 571 aa8.59□□□□□ -1.03
BRD9-211ENST00000494422 ATRNO75882 1429 aa8.59□□□□□ -1.03
BRD9-211ENST00000494422 NRAPQ86VF7 1730 aa8.59□□□□□ -1.03
BRD9-211ENST00000494422 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 CSB-PGBD3P0DP91 1061 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 PPP2R1AP30153 589 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 TNNT2P45379 298 aaPredicted RBP8.58□□□□□ -1.04
BRD9-211ENST00000494422 MTHFSP49914 203 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 RBM6P78332 1123 aaKnown RBP8.58□□□□□ -1.04
BRD9-211ENST00000494422 BARGINQ6ZT62 677 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 NUDCQ9Y266 331 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 EMILIN1Q9Y6C2 1016 aa8.58□□□□□ -1.04
BRD9-211ENST00000494422 SPATA31A5Q5VU36 1347 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 SPATA31A7Q8IWB4 1347 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 PPM1GO15355 546 aaPredicted RBP8.57□□□□□ -1.04
BRD9-211ENST00000494422 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
BRD9-211ENST00000494422 TOM1L2Q6ZVM7 507 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 TCP11L2Q8N4U5 519 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 GJD4Q96KN9 370 aaPredicted RBP8.57□□□□□ -1.04
BRD9-211ENST00000494422 QTRT2Q9H974 415 aaKnown RBP8.57□□□□□ -1.04
BRD9-211ENST00000494422 PLSCR2Q9NRY7 297 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 AXIN2Q9Y2T1 843 aa8.57□□□□□ -1.04
BRD9-211ENST00000494422 SPATA31A1Q5TZJ5 1347 aa8.56□□□□□ -1.04
BRD9-211ENST00000494422 ONECUT3O60422 494 aaPredicted RBP8.56□□□□□ -1.04
BRD9-211ENST00000494422 RXRBP28702 533 aa8.56□□□□□ -1.04
BRD9-211ENST00000494422 HSP90AB2PQ58FF8 381 aa8.56□□□□□ -1.04
BRD9-211ENST00000494422 PNNQ9H307 717 aaKnown RBP8.56□□□□□ -1.04
BRD9-211ENST00000494422 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
BRD9-211ENST00000494422 NCAPD2Q15021 1401 aa8.55□□□□□ -1.04
BRD9-211ENST00000494422 PEAK1Q9H792 1746 aa8.55□□□□□ -1.04
BRD9-211ENST00000494422 LARP1Q6PKG0 1096 aaKnown RBP8.55□□□□□ -1.04
BRD9-211ENST00000494422 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
BRD9-211ENST00000494422 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
BRD9-211ENST00000494422 IGSF1Q8N6C5 1336 aa8.54□□□□□ -1.04
BRD9-211ENST00000494422 RGPD5Q99666 1765 aa8.54□□□□□ -1.04
BRD9-211ENST00000494422 FBLN1P23142 703 aa8.54□□□□□ -1.04
BRD9-211ENST00000494422 IL13P35225 146 aa8.54□□□□□ -1.04
BRD9-211ENST00000494422 EIF4A2Q14240 407 aaKnown RBP8.54□□□□□ -1.04
BRD9-211ENST00000494422 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
BRD9-211ENST00000494422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.54□□□□□ -1.043e-9■□□□□ 11.2
BRD9-211ENST00000494422 RGS17Q9UGC6 210 aaPredicted RBP8.54□□□□□ -1.04
BRD9-211ENST00000494422 COL3A1P02461 1466 aaPredicted RBP8.53□□□□□ -1.04
BRD9-211ENST00000494422 KDRP35968 1356 aa8.53□□□□□ -1.04
BRD9-211ENST00000494422 IL2RBP14784 551 aa8.53□□□□□ -1.04
BRD9-211ENST00000494422 RAPGEF4Q8WZA2 1011 aa8.53□□□□□ -1.04
BRD9-211ENST00000494422 CCER2I3L3R5 266 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 FCHSD2O94868 740 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 NEFMP07197 916 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 TATP17735 454 aaPredicted RBP8.52□□□□□ -1.05
BRD9-211ENST00000494422 CNGB1Q14028 1251 aaPredicted RBP8.52□□□□□ -1.05
BRD9-211ENST00000494422 NBPF6Q5VWK0 638 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 PELP1Q8IZL8 1130 aaKnown RBP8.52□□□□□ -1.05
BRD9-211ENST00000494422 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
BRD9-211ENST00000494422 NBPF4Q96M43 638 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 EYA1Q99502 592 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 GLI3P10071 1580 aa8.52□□□□□ -1.05
BRD9-211ENST00000494422 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
BRD9-211ENST00000494422 EXOC5O00471 708 aa8.51□□□□□ -1.05
BRD9-211ENST00000494422 AMOTQ4VCS5 1084 aa8.51□□□□□ -1.05
BRD9-211ENST00000494422 POTEAQ6S8J7 498 aa8.51□□□□□ -1.05
BRD9-211ENST00000494422 DISP2A7MBM2 1401 aa8.51□□□□□ -1.05
BRD9-211ENST00000494422 RGPD1P0DJD0 1748 aa8.51□□□□□ -1.05
BRD9-211ENST00000494422 THSD7AQ9UPZ6 1657 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 WNK3Q9BYP7 1800 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 OVOS2A0A0G2JMS6 1433 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 MNX1P50219 401 aaPredicted RBP8.5□□□□□ -1.05
BRD9-211ENST00000494422 WDR43Q15061 677 aaKnown RBP eCLIP8.5□□□□□ -1.05
BRD9-211ENST00000494422 DDB1Q16531 1140 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 USP35Q9P2H5 1018 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
BRD9-211ENST00000494422 BCL9O00512 1426 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 TNS2Q63HR2 1409 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
BRD9-211ENST00000494422 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 FAM98CQ17RN3 349 aaKnown RBP8.49□□□□□ -1.05
BRD9-211ENST00000494422 PLEKHO1Q53GL0 409 aaPredicted RBP8.49□□□□□ -1.05
BRD9-211ENST00000494422 SULT6B1Q6IMI4 303 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 SEPT12Q8IYM1 358 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 PCDH11XQ9BZA7 1347 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 PCDH11YQ9BZA8 1340 aa8.49□□□□□ -1.05
BRD9-211ENST00000494422 A0A0G2JS52 829 aa8.48□□□□□ -1.05
BRD9-211ENST00000494422 U2SURPO15042 1029 aaKnown RBP8.48□□□□□ -1.05
BRD9-211ENST00000494422 U2AF1L5P0DN76 240 aaPredicted RBP8.48□□□□□ -1.05
BRD9-211ENST00000494422 U2AF1Q01081 240 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRD9-211ENST00000494422 MYT1Q01538 1121 aa8.48□□□□□ -1.05
BRD9-211ENST00000494422 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
BRD9-211ENST00000494422 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
BRD9-211ENST00000494422 MRS2Q9HD23 443 aa8.48□□□□□ -1.05
BRD9-211ENST00000494422 RGS12O14924 1447 aa8.47□□□□□ -1.05
BRD9-211ENST00000494422 HMGB2P26583 209 aaKnown RBP8.47□□□□□ -1.05
BRD9-211ENST00000494422 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
BRD9-211ENST00000494422 NGEFQ8N5V2 710 aa8.47□□□□□ -1.05
BRD9-211ENST00000494422 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
BRD9-211ENST00000494422 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms