RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 GAS2L2Q8NHY3 880 aa18.4■□□□□ 0.54
PDZRN3-210ENST00000492909 POTEAQ6S8J7 498 aa18.39■□□□□ 0.53
PDZRN3-210ENST00000492909 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.53
PDZRN3-210ENST00000492909 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-210ENST00000492909 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
PDZRN3-210ENST00000492909 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
PDZRN3-210ENST00000492909 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
PDZRN3-210ENST00000492909 NEFLP07196 543 aa18.37■□□□□ 0.53
PDZRN3-210ENST00000492909 UNC5CLQ8IV45 518 aa18.37■□□□□ 0.53
PDZRN3-210ENST00000492909 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
PDZRN3-210ENST00000492909 ZNF772Q68DY9 489 aaPredicted RBP18.37■□□□□ 0.53
PDZRN3-210ENST00000492909 IL16Q14005 1332 aa18.37■□□□□ 0.53
PDZRN3-210ENST00000492909 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
PDZRN3-210ENST00000492909 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
PDZRN3-210ENST00000492909 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
PDZRN3-210ENST00000492909 EVA1CP58658 441 aa18.35■□□□□ 0.53
PDZRN3-210ENST00000492909 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
PDZRN3-210ENST00000492909 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
PDZRN3-210ENST00000492909 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
PDZRN3-210ENST00000492909 AMOTQ4VCS5 1084 aa18.34■□□□□ 0.53
PDZRN3-210ENST00000492909 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
PDZRN3-210ENST00000492909 RAPGEF4Q8WZA2 1011 aa18.34■□□□□ 0.53
PDZRN3-210ENST00000492909 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.52
PDZRN3-210ENST00000492909 LARP1Q6PKG0 1096 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 ATRNO75882 1429 aa18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 GNAT3A8MTJ3 354 aa18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 CARD10Q9BWT7 1032 aa18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
PDZRN3-210ENST00000492909 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-210ENST00000492909 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
PDZRN3-210ENST00000492909 DCTN1Q14203 1278 aa18.31■□□□□ 0.52
PDZRN3-210ENST00000492909 PARP4Q9UKK3 1724 aaKnown RBP18.31■□□□□ 0.52
PDZRN3-210ENST00000492909 MEGF6O75095 1541 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 CRB1P82279 1406 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 VPS72Q15906 364 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 MCM10Q7L590 875 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 ZNF530Q6P9A1 599 aaPredicted RBP18.3■□□□□ 0.52
PDZRN3-210ENST00000492909 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
PDZRN3-210ENST00000492909 GNAI1P63096 354 aa18.29■□□□□ 0.52
PDZRN3-210ENST00000492909 IFT57Q9NWB7 429 aa18.29■□□□□ 0.52
PDZRN3-210ENST00000492909 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
PDZRN3-210ENST00000492909 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
PDZRN3-210ENST00000492909 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
PDZRN3-210ENST00000492909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDZRN3-210ENST00000492909 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
PDZRN3-210ENST00000492909 RXRBP28702 533 aa18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 CFAP44Q96MT7 982 aa18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
PDZRN3-210ENST00000492909 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.51
PDZRN3-210ENST00000492909 GLI3P10071 1580 aa18.26■□□□□ 0.51
PDZRN3-210ENST00000492909 SPATA31A5Q5VU36 1347 aa18.26■□□□□ 0.51
PDZRN3-210ENST00000492909 SPATA31A7Q8IWB4 1347 aa18.26■□□□□ 0.51
PDZRN3-210ENST00000492909 ZNF853P0CG23 659 aa18.26■□□□□ 0.51
PDZRN3-210ENST00000492909 OVOS2A0A0G2JMS6 1433 aa18.26■□□□□ 0.51
PDZRN3-210ENST00000492909 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
PDZRN3-210ENST00000492909 SPATA31A1Q5TZJ5 1347 aa18.25■□□□□ 0.51
PDZRN3-210ENST00000492909 IL2RBP14784 551 aa18.25■□□□□ 0.51
PDZRN3-210ENST00000492909 ILDR2Q71H61 639 aa18.24■□□□□ 0.51
PDZRN3-210ENST00000492909 IL17REQ8NFR9 667 aa18.24■□□□□ 0.51
PDZRN3-210ENST00000492909 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
PDZRN3-210ENST00000492909 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
PDZRN3-210ENST00000492909 CEMIPQ8WUJ3 1361 aa18.23■□□□□ 0.51
PDZRN3-210ENST00000492909 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
PDZRN3-210ENST00000492909 MYT1Q01538 1121 aa18.22■□□□□ 0.51
PDZRN3-210ENST00000492909 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
PDZRN3-210ENST00000492909 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
PDZRN3-210ENST00000492909 CHL1O00533 1208 aa18.22■□□□□ 0.51
PDZRN3-210ENST00000492909 ADAMTS7Q9UKP4 1686 aa18.21■□□□□ 0.51
PDZRN3-210ENST00000492909 WNK3Q9BYP7 1800 aa18.21■□□□□ 0.51
PDZRN3-210ENST00000492909 IFNL2Q8IZJ0 200 aa18.21■□□□□ 0.51
PDZRN3-210ENST00000492909 SCN11AQ9UI33 1791 aa18.21■□□□□ 0.51
PDZRN3-210ENST00000492909 PHKG2P15735 406 aa18.2■□□□□ 0.5
PDZRN3-210ENST00000492909 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
PDZRN3-210ENST00000492909 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
PDZRN3-210ENST00000492909 LGR6Q9HBX8 967 aa18.2■□□□□ 0.5
PDZRN3-210ENST00000492909 A0A0G2JS52 829 aa18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 RGS12O14924 1447 aa18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 RNMTO43148 476 aaKnown RBP18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 PCDH11XQ9BZA7 1347 aa18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 PCDH11YQ9BZA8 1340 aa18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
PDZRN3-210ENST00000492909 CYP27B1O15528 508 aa18.18■□□□□ 0.5
PDZRN3-210ENST00000492909 TEFQ10587 303 aa18.18■□□□□ 0.5
PDZRN3-210ENST00000492909 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
PDZRN3-210ENST00000492909 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
PDZRN3-210ENST00000492909 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-210ENST00000492909 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
PDZRN3-210ENST00000492909 SEPT12Q8IYM1 358 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms