RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 SPRYD3Q8NCJ5 442 aa8.45□□□□□ -1.06
RBM39-237ENST00000492779 ALS2Q96Q42 1657 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 MAP2P11137 1827 aaKnown RBP8.44□□□□□ -1.06
RBM39-237ENST00000492779 KIF20BQ96Q89 1820 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 U2SURPO15042 1029 aaKnown RBP8.44□□□□□ -1.06
RBM39-237ENST00000492779 HOXC9P31274 260 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 RARSP54136 660 aaKnown RBP8.44□□□□□ -1.06
RBM39-237ENST00000492779 C8orf37Q96NL8 207 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 STRN4Q9NRL3 753 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 VIRMAQ69YN4 1812 aaKnown RBP8.44□□□□□ -1.06
RBM39-237ENST00000492779 NPC1L1Q9UHC9 1359 aa8.44□□□□□ -1.06
RBM39-237ENST00000492779 GOLGB1Q14789 3259 aaKnown RBP8.44□□□□□ -1.06
RBM39-237ENST00000492779 TCP11L2Q8N4U5 519 aa8.43□□□□□ -1.06
RBM39-237ENST00000492779 ANTXR1Q9H6X2 564 aa8.43□□□□□ -1.06
RBM39-237ENST00000492779 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
RBM39-237ENST00000492779 BTG4Q9NY30 223 aa8.43□□□□□ -1.06
RBM39-237ENST00000492779 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
RBM39-237ENST00000492779 AHDC1Q5TGY3 1603 aaPredicted RBP8.42□□□□□ -1.06
RBM39-237ENST00000492779 ILDR1Q86SU0 546 aaPredicted RBP8.42□□□□□ -1.06
RBM39-237ENST00000492779 TSR2Q969E8 191 aaKnown RBP8.42□□□□□ -1.06
RBM39-237ENST00000492779 NFAT5O94916 1531 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 E9PSI1 815 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 NBPF6Q5VWK0 638 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 NBPF4Q96M43 638 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 LRP6O75581 1613 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 ARHGEF10O15013 1369 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 NSD2O96028 1365 aa8.42□□□□□ -1.06
RBM39-237ENST00000492779 IQSEC2Q5JU85 1478 aa8.41□□□□□ -1.06
RBM39-237ENST00000492779 LARP1Q6PKG0 1096 aaKnown RBP8.41□□□□□ -1.06
RBM39-237ENST00000492779 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
RBM39-237ENST00000492779 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
RBM39-237ENST00000492779 IL13P35225 146 aa8.41□□□□□ -1.06
RBM39-237ENST00000492779 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.063e-7■□□□□ 9.7
RBM39-237ENST00000492779 KCNH5Q8NCM2 988 aa8.41□□□□□ -1.06
RBM39-237ENST00000492779 FBXO41Q8TF61 875 aa8.41□□□□□ -1.06
RBM39-237ENST00000492779 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
RBM39-237ENST00000492779 IP6K1Q92551 441 aa8.4□□□□□ -1.06
RBM39-237ENST00000492779 EYA1Q99502 592 aa8.4□□□□□ -1.06
RBM39-237ENST00000492779 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
RBM39-237ENST00000492779 DIAPH1O60610 1272 aaKnown RBP8.4□□□□□ -1.07
RBM39-237ENST00000492779 NGLY1Q96IV0 654 aa8.4□□□□□ -1.07
RBM39-237ENST00000492779 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.07
RBM39-237ENST00000492779 AATKQ6ZMQ8 1374 aa8.4□□□□□ -1.07
RBM39-237ENST00000492779 JCADQ9P266 1359 aa8.4□□□□□ -1.07
RBM39-237ENST00000492779 CAMTA1Q9Y6Y1 1673 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 RGPD5Q99666 1765 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 SLIT3O75094 1523 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 UTRNP46939 3433 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 RRAGDQ9NQL2 400 aaPredicted RBP8.39□□□□□ -1.07
RBM39-237ENST00000492779 NLRP2Q9NX02 1062 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 LTN1O94822 1766 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 ERBB3P21860 1342 aa8.39□□□□□ -1.07
RBM39-237ENST00000492779 PANK2Q9BZ23 570 aa8.38□□□□□ -1.07
RBM39-237ENST00000492779 ANKRD26Q9UPS8 1709 aa8.38□□□□□ -1.07
RBM39-237ENST00000492779 PHRF1Q9P1Y6 1649 aaKnown RBP8.38□□□□□ -1.07
RBM39-237ENST00000492779 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
RBM39-237ENST00000492779 FLT4P35916 1363 aa8.38□□□□□ -1.07
RBM39-237ENST00000492779 PDE3AQ14432 1141 aa8.38□□□□□ -1.07
RBM39-237ENST00000492779 CRYBG1Q9Y4K1 1723 aa8.38□□□□□ -1.07
RBM39-237ENST00000492779 MEX3CQ5U5Q3 659 aaKnown RBP8.37□□□□□ -1.07
RBM39-237ENST00000492779 PRKAR2BP31323 418 aa8.37□□□□□ -1.07
RBM39-237ENST00000492779 EVA1CP58658 441 aa8.37□□□□□ -1.07
RBM39-237ENST00000492779 TOM1L2Q6ZVM7 507 aa8.37□□□□□ -1.07
RBM39-237ENST00000492779 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.37□□□□□ -1.07
RBM39-237ENST00000492779 TBC1D32Q96NH3 1257 aa8.37□□□□□ -1.07
RBM39-237ENST00000492779 RGPD2P0DJD1 1756 aa8.37□□□□□ -1.07
RBM39-237ENST00000492779 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
RBM39-237ENST00000492779 CFAP53Q96M91 514 aa8.36□□□□□ -1.07
RBM39-237ENST00000492779 TRIM35Q9UPQ4 493 aa8.36□□□□□ -1.07
RBM39-237ENST00000492779 CCDC9Q9Y3X0 531 aaKnown RBP8.36□□□□□ -1.07
RBM39-237ENST00000492779 ABCA3Q99758 1704 aa8.36□□□□□ -1.07
RBM39-237ENST00000492779 CPDO75976 1380 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 CANXP27824 592 aaKnown RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 EXOSC9Q06265 439 aaKnown RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 RUNDC1Q96C34 613 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 THUMPD2Q9BTF0 503 aaKnown RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 AFF2P51816 1311 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 CDK12Q9NYV4 1490 aaPredicted RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 TRIM27P14373 513 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 DCTN1Q14203 1278 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 PLEKHF1Q96S99 279 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 RGS17Q9UGC6 210 aaPredicted RBP8.35□□□□□ -1.07
RBM39-237ENST00000492779 USP21Q9UK80 565 aa8.35□□□□□ -1.07
RBM39-237ENST00000492779 COL18A1P39060 1754 aa8.34□□□□□ -1.07
RBM39-237ENST00000492779 COL5A2P05997 1499 aaPredicted RBP8.34□□□□□ -1.07
RBM39-237ENST00000492779 BCL9LQ86UU0 1499 aa8.34□□□□□ -1.07
RBM39-237ENST00000492779 CD2BP2O95400 341 aaKnown RBP8.34□□□□□ -1.07
RBM39-237ENST00000492779 XRCC6P12956 609 aaKnown RBP eCLIP8.34□□□□□ -1.083e-9■■□□□ 12.4
RBM39-237ENST00000492779 SPATA31A6Q5VVP1 1343 aa8.33□□□□□ -1.08
RBM39-237ENST00000492779 FAM98CQ17RN3 349 aaKnown RBP8.33□□□□□ -1.08
RBM39-237ENST00000492779 USP54Q70EL1 1684 aa8.33□□□□□ -1.08
RBM39-237ENST00000492779 WDR17Q8IZU2 1322 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms