RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
ABCD4-214ENST00000489678 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 NGEFQ8N5V2 710 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 BCAR3O75815 825 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 DCCP43146 1447 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 ARXQ96QS3 562 aa13.37□□□□□ -0.27
ABCD4-214ENST00000489678 USP21Q9UK80 565 aa13.36□□□□□ -0.27
ABCD4-214ENST00000489678 USP19O94966 1318 aa13.36□□□□□ -0.27
ABCD4-214ENST00000489678 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
ABCD4-214ENST00000489678 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
ABCD4-214ENST00000489678 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
ABCD4-214ENST00000489678 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
ABCD4-214ENST00000489678 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
ABCD4-214ENST00000489678 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
ABCD4-214ENST00000489678 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
ABCD4-214ENST00000489678 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 FCHSD2O94868 740 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 GOLGA2Q08379 1002 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 AFF2P51816 1311 aa13.34□□□□□ -0.27
ABCD4-214ENST00000489678 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
ABCD4-214ENST00000489678 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
ABCD4-214ENST00000489678 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
ABCD4-214ENST00000489678 COL3A1P02461 1466 aaPredicted RBP13.33□□□□□ -0.28
ABCD4-214ENST00000489678 SLFN5Q08AF3 891 aa13.33□□□□□ -0.28
ABCD4-214ENST00000489678 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
ABCD4-214ENST00000489678 AATKQ6ZMQ8 1374 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 CYP27B1O15528 508 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 NFE2L2Q16236 605 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 KCNQ2O43526 872 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 TRMT2AQ8IZ69 625 aaKnown RBP13.32□□□□□ -0.28
ABCD4-214ENST00000489678 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 PHLPP1O60346 1717 aa13.32□□□□□ -0.28
ABCD4-214ENST00000489678 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
ABCD4-214ENST00000489678 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
ABCD4-214ENST00000489678 LTN1O94822 1766 aa13.31□□□□□ -0.28
ABCD4-214ENST00000489678 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
ABCD4-214ENST00000489678 C1orf141Q5JVX7 400 aa13.31□□□□□ -0.28
ABCD4-214ENST00000489678 NFAT5O94916 1531 aa13.31□□□□□ -0.28
ABCD4-214ENST00000489678 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
ABCD4-214ENST00000489678 C8orf58Q8NAV2 365 aa13.3□□□□□ -0.28
ABCD4-214ENST00000489678 ILDR1Q86SU0 546 aaPredicted RBP13.3□□□□□ -0.28
ABCD4-214ENST00000489678 MEGF6O75095 1541 aa13.3□□□□□ -0.28
ABCD4-214ENST00000489678 LRP6O75581 1613 aa13.29□□□□□ -0.28
ABCD4-214ENST00000489678 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
ABCD4-214ENST00000489678 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
ABCD4-214ENST00000489678 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
ABCD4-214ENST00000489678 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
ABCD4-214ENST00000489678 WDR17Q8IZU2 1322 aa13.29□□□□□ -0.28
ABCD4-214ENST00000489678 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
ABCD4-214ENST00000489678 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-214ENST00000489678 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
ABCD4-214ENST00000489678 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
ABCD4-214ENST00000489678 TEFQ10587 303 aa13.28□□□□□ -0.28
ABCD4-214ENST00000489678 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.28
ABCD4-214ENST00000489678 IL2RBP14784 551 aa13.27□□□□□ -0.28
ABCD4-214ENST00000489678 JCADQ9P266 1359 aa13.26□□□□□ -0.29
ABCD4-214ENST00000489678 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
ABCD4-214ENST00000489678 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
ABCD4-214ENST00000489678 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
ABCD4-214ENST00000489678 PLEKHO1Q53GL0 409 aaPredicted RBP13.25□□□□□ -0.29
ABCD4-214ENST00000489678 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
ABCD4-214ENST00000489678 AIMP1Q12904 312 aaKnown RBP13.25□□□□□ -0.29
ABCD4-214ENST00000489678 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
ABCD4-214ENST00000489678 ALS2Q96Q42 1657 aa13.25□□□□□ -0.29
ABCD4-214ENST00000489678 DDB1Q16531 1140 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 UNC5CLQ8IV45 518 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 E9PSI1 815 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 MYL6BP14649 208 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-214ENST00000489678 ANO8Q9HCE9 1232 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-214ENST00000489678 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
ABCD4-214ENST00000489678 BTBD11A6QL63 1104 aa13.23□□□□□ -0.29
ABCD4-214ENST00000489678 EXOC5O00471 708 aa13.23□□□□□ -0.29
ABCD4-214ENST00000489678 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-214ENST00000489678 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-214ENST00000489678 PHKG2P15735 406 aa13.22□□□□□ -0.29
ABCD4-214ENST00000489678 CABP4P57796 275 aa13.22□□□□□ -0.29
ABCD4-214ENST00000489678 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
ABCD4-214ENST00000489678 F6X3S4 739 aa13.22□□□□□ -0.29
ABCD4-214ENST00000489678 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
ABCD4-214ENST00000489678 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-214ENST00000489678 KDM2BQ8NHM5 1336 aa13.21□□□□□ -0.29
ABCD4-214ENST00000489678 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.29
ABCD4-214ENST00000489678 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
ABCD4-214ENST00000489678 CARD10Q9BWT7 1032 aa13.21□□□□□ -0.29
ABCD4-214ENST00000489678 ANKRD26Q9UPS8 1709 aa13.21□□□□□ -0.29
ABCD4-214ENST00000489678 RNMTO43148 476 aaKnown RBP13.21□□□□□ -0.3
ABCD4-214ENST00000489678 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.3
ABCD4-214ENST00000489678 SSH1Q8WYL5 1049 aa13.21□□□□□ -0.3
ABCD4-214ENST00000489678 G2E3Q7L622 706 aa13.2□□□□□ -0.3
ABCD4-214ENST00000489678 TWISTNBQ3B726 338 aaPredicted RBP13.2□□□□□ -0.3
ABCD4-214ENST00000489678 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
ABCD4-214ENST00000489678 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
ABCD4-214ENST00000489678 SPATA31A1Q5TZJ5 1347 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms