RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 SPATA31A6Q5VVP1 1343 aa16.74■□□□□ 0.27
TOP3A-206ENST00000489131 CRB1P82279 1406 aa16.74■□□□□ 0.27
TOP3A-206ENST00000489131 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
TOP3A-206ENST00000489131 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
TOP3A-206ENST00000489131 IFT57Q9NWB7 429 aa16.74■□□□□ 0.27
TOP3A-206ENST00000489131 MEGF6O75095 1541 aa16.74■□□□□ 0.27
TOP3A-206ENST00000489131 PLEKHO1Q53GL0 409 aaPredicted RBP16.73■□□□□ 0.27
TOP3A-206ENST00000489131 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
TOP3A-206ENST00000489131 SLIT2O94813 1529 aa16.73■□□□□ 0.27
TOP3A-206ENST00000489131 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
TOP3A-206ENST00000489131 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
TOP3A-206ENST00000489131 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
TOP3A-206ENST00000489131 RCAN3Q9UKA8 241 aa16.72■□□□□ 0.27
TOP3A-206ENST00000489131 FANCIQ9NVI1 1328 aa16.71■□□□□ 0.27
TOP3A-206ENST00000489131 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
TOP3A-206ENST00000489131 GNAI1P63096 354 aa16.71■□□□□ 0.27
TOP3A-206ENST00000489131 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
TOP3A-206ENST00000489131 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
TOP3A-206ENST00000489131 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
TOP3A-206ENST00000489131 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
TOP3A-206ENST00000489131 WNK3Q9BYP7 1800 aa16.7■□□□□ 0.26
TOP3A-206ENST00000489131 BTG4Q9NY30 223 aa16.69■□□□□ 0.26
TOP3A-206ENST00000489131 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
TOP3A-206ENST00000489131 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
TOP3A-206ENST00000489131 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.68■□□□□ 0.26
TOP3A-206ENST00000489131 CHL1O00533 1208 aa16.68■□□□□ 0.26
TOP3A-206ENST00000489131 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-206ENST00000489131 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
TOP3A-206ENST00000489131 RTF1Q92541 710 aaKnown RBP16.68■□□□□ 0.26
TOP3A-206ENST00000489131 SHANK3Q9BYB0 1731 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 TOM1L2Q6ZVM7 507 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
TOP3A-206ENST00000489131 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
TOP3A-206ENST00000489131 MRC1P22897 1456 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 LRP6O75581 1613 aa16.67■□□□□ 0.26
TOP3A-206ENST00000489131 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
TOP3A-206ENST00000489131 EVA1CP58658 441 aa16.66■□□□□ 0.26
TOP3A-206ENST00000489131 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
TOP3A-206ENST00000489131 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
TOP3A-206ENST00000489131 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
TOP3A-206ENST00000489131 HSPA1LP34931 641 aa16.65■□□□□ 0.26
TOP3A-206ENST00000489131 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
TOP3A-206ENST00000489131 MCM10Q7L590 875 aa16.65■□□□□ 0.26
TOP3A-206ENST00000489131 MBIPQ9NS73 344 aa16.65■□□□□ 0.26
TOP3A-206ENST00000489131 IL2RBP14784 551 aa16.64■□□□□ 0.25
TOP3A-206ENST00000489131 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
TOP3A-206ENST00000489131 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
TOP3A-206ENST00000489131 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
TOP3A-206ENST00000489131 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
TOP3A-206ENST00000489131 PHKG2P15735 406 aa16.63■□□□□ 0.25
TOP3A-206ENST00000489131 C1orf141Q5JVX7 400 aa16.63■□□□□ 0.25
TOP3A-206ENST00000489131 FNBP4Q8N3X1 1017 aaPredicted RBP16.63■□□□□ 0.25
TOP3A-206ENST00000489131 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
TOP3A-206ENST00000489131 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
TOP3A-206ENST00000489131 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
TOP3A-206ENST00000489131 BCL9LQ86UU0 1499 aa16.62■□□□□ 0.25
TOP3A-206ENST00000489131 ADAMTS2O95450 1211 aa16.62■□□□□ 0.25
TOP3A-206ENST00000489131 RRP1P56182 461 aaKnown RBP16.62■□□□□ 0.25
TOP3A-206ENST00000489131 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
TOP3A-206ENST00000489131 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
TOP3A-206ENST00000489131 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
TOP3A-206ENST00000489131 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
TOP3A-206ENST00000489131 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
TOP3A-206ENST00000489131 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
TOP3A-206ENST00000489131 RNMTO43148 476 aaKnown RBP16.61■□□□□ 0.25
TOP3A-206ENST00000489131 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
TOP3A-206ENST00000489131 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
TOP3A-206ENST00000489131 NKX1-1Q15270 411 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-206ENST00000489131 SPATA31A1Q5TZJ5 1347 aa16.61■□□□□ 0.25
TOP3A-206ENST00000489131 CYP27B1O15528 508 aa16.6■□□□□ 0.25
TOP3A-206ENST00000489131 NEFLP07196 543 aa16.6■□□□□ 0.25
TOP3A-206ENST00000489131 BRPF1P55201 1214 aaPredicted RBP16.6■□□□□ 0.25
TOP3A-206ENST00000489131 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
TOP3A-206ENST00000489131 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
TOP3A-206ENST00000489131 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
TOP3A-206ENST00000489131 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
TOP3A-206ENST00000489131 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-206ENST00000489131 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-206ENST00000489131 SOCS7O14512 581 aa16.59■□□□□ 0.25
TOP3A-206ENST00000489131 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
TOP3A-206ENST00000489131 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
TOP3A-206ENST00000489131 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
TOP3A-206ENST00000489131 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-206ENST00000489131 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
TOP3A-206ENST00000489131 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
TOP3A-206ENST00000489131 TNS2Q63HR2 1409 aa16.58■□□□□ 0.24
TOP3A-206ENST00000489131 VAMP4O75379 141 aa16.57■□□□□ 0.24
TOP3A-206ENST00000489131 VPS72Q15906 364 aa16.57■□□□□ 0.24
TOP3A-206ENST00000489131 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
TOP3A-206ENST00000489131 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.56■□□□□ 0.24
TOP3A-206ENST00000489131 TSPYL4Q9UJ04 414 aa16.56■□□□□ 0.24
TOP3A-206ENST00000489131 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
TOP3A-206ENST00000489131 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
TOP3A-206ENST00000489131 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
TOP3A-206ENST00000489131 HOXB7P09629 217 aa16.54■□□□□ 0.24
TOP3A-206ENST00000489131 TEFQ10587 303 aa16.54■□□□□ 0.24
TOP3A-206ENST00000489131 TWISTNBQ3B726 338 aaPredicted RBP16.54■□□□□ 0.24
TOP3A-206ENST00000489131 TSPYL6Q8N831 410 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms