RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PNMA1Q8ND90 353 aa7.33□□□□□ -1.24
CD46-215ENST00000488596 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
CD46-215ENST00000488596 SV2AQ7L0J3 742 aa7.32□□□□□ -1.24
CD46-215ENST00000488596 MSTNO14793 375 aa7.31□□□□□ -1.24
CD46-215ENST00000488596 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
CD46-215ENST00000488596 GOPCQ9HD26 462 aa7.31□□□□□ -1.24
CD46-215ENST00000488596 CYLDQ9NQC7 956 aa7.31□□□□□ -1.24
CD46-215ENST00000488596 GIGYF1O75420 1035 aaPredicted RBP7.3□□□□□ -1.24
CD46-215ENST00000488596 SEPT12Q8IYM1 358 aa7.3□□□□□ -1.24
CD46-215ENST00000488596 GJD4Q96KN9 370 aaPredicted RBP7.3□□□□□ -1.24
CD46-215ENST00000488596 CUEDC1Q9NWM3 386 aaPredicted RBP7.3□□□□□ -1.24
CD46-215ENST00000488596 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
CD46-215ENST00000488596 TMEM259Q4ZIN3 620 aa7.29□□□□□ -1.24
CD46-215ENST00000488596 LYSMD3Q7Z3D4 306 aa7.29□□□□□ -1.24
CD46-215ENST00000488596 PRICKLE2Q7Z3G6 844 aa7.29□□□□□ -1.24
CD46-215ENST00000488596 PCMTD1Q96MG8 357 aaPredicted RBP7.29□□□□□ -1.24
CD46-215ENST00000488596 ZBBXA8MT70 800 aa7.28□□□□□ -1.24
CD46-215ENST00000488596 MAP3K10Q02779 954 aa7.28□□□□□ -1.24
CD46-215ENST00000488596 IL27Q8NEV9 243 aa7.28□□□□□ -1.24
CD46-215ENST00000488596 RHOQP17081 205 aa7.27□□□□□ -1.25
CD46-215ENST00000488596 RNF144AP50876 292 aaPredicted RBP7.27□□□□□ -1.25
CD46-215ENST00000488596 PLA2G4EQ3MJ16 856 aa7.27□□□□□ -1.25
CD46-215ENST00000488596 SPOCK3Q9BQ16 436 aa7.27□□□□□ -1.25
CD46-215ENST00000488596 ENAMQ9NRM1 1142 aa7.27□□□□□ -1.25
CD46-215ENST00000488596 PCDHB9Q9Y5E1 797 aa7.27□□□□□ -1.25
CD46-215ENST00000488596 PHF20L1A8MW92 1017 aa7.26□□□□□ -1.25
CD46-215ENST00000488596 ATP5J2-PTCD1G3V325 749 aa7.26□□□□□ -1.25
CD46-215ENST00000488596 ADAMTS2O95450 1211 aa7.26□□□□□ -1.25
CD46-215ENST00000488596 SRSF11Q05519 484 aaKnown RBP7.26□□□□□ -1.25
CD46-215ENST00000488596 GAS6Q14393 721 aa7.25□□□□□ -1.25
CD46-215ENST00000488596 LYPD4Q6UWN0 246 aa7.25□□□□□ -1.25
CD46-215ENST00000488596 A0A1W2PRU2 124 aa7.24□□□□□ -1.25
CD46-215ENST00000488596 MEN1O00255 615 aa7.24□□□□□ -1.25
CD46-215ENST00000488596 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
CD46-215ENST00000488596 DCAF5Q96JK2 942 aa7.24□□□□□ -1.25
CD46-215ENST00000488596 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
CD46-215ENST00000488596 GPR37L1O60883 481 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 PROCP04070 461 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 CELA2BP08218 269 aaPredicted RBP7.22□□□□□ -1.25
CD46-215ENST00000488596 SCTRP47872 440 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 POU4F2Q12837 409 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 DBN1Q16643 649 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 CC2D2BQ6DHV5 1058 aa7.22□□□□□ -1.25
CD46-215ENST00000488596 BEND7Q8N7W2 519 aaPredicted RBP7.22□□□□□ -1.25
CD46-215ENST00000488596 ZNF837Q96EG3 531 aaPredicted RBP7.22□□□□□ -1.25
CD46-215ENST00000488596 GPR25O00155 361 aa7.21□□□□□ -1.26
CD46-215ENST00000488596 GPC1P35052 558 aa7.21□□□□□ -1.26
CD46-215ENST00000488596 NR1H3Q13133 447 aa7.21□□□□□ -1.26
CD46-215ENST00000488596 TRIM22Q8IYM9 498 aa7.21□□□□□ -1.26
CD46-215ENST00000488596 GALNT6Q8NCL4 622 aa7.21□□□□□ -1.26
CD46-215ENST00000488596 K7ELQ4 463 aaPredicted RBP7.2□□□□□ -1.26
CD46-215ENST00000488596 ITGB2P05107 769 aa7.2□□□□□ -1.26
CD46-215ENST00000488596 RNF20Q5VTR2 975 aa7.2□□□□□ -1.26
CD46-215ENST00000488596 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
CD46-215ENST00000488596 PSMG3-AS1Q96PY0 264 aa7.2□□□□□ -1.26
CD46-215ENST00000488596 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
CD46-215ENST00000488596 SLC27A3Q5K4L6 730 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 RIPOR1Q6ZS17 1223 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 CCDC125Q86Z20 511 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 MTMR14Q8NCE2 650 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 OSBPL3Q9H4L5 887 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 DYRK1BQ9Y463 629 aa7.19□□□□□ -1.26
CD46-215ENST00000488596 TRAK2O60296 914 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 CLN3Q13286 438 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 GMCL1Q96IK5 515 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 NLRP3Q96P20 1036 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 GAS2L1Q99501 681 aaPredicted RBP7.18□□□□□ -1.26
CD46-215ENST00000488596 MBIPQ9NS73 344 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 PCDHB11Q9Y5F2 797 aa7.18□□□□□ -1.26
CD46-215ENST00000488596 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
CD46-215ENST00000488596 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
CD46-215ENST00000488596 NBPF10Q6P3W6 841 aaKnown RBP7.17□□□□□ -1.26
CD46-215ENST00000488596 CYP2U1Q7Z449 544 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 Q8N3U1 123 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 NBPF15Q8N660 670 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 BANK1Q8NDB2 785 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 GTPBP3Q969Y2 492 aaKnown RBP7.17□□□□□ -1.26
CD46-215ENST00000488596 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 ARHGEF10LQ9HCE6 1279 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
CD46-215ENST00000488596 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.16□□□□□ -1.26
CD46-215ENST00000488596 RAB6BQ9NRW1 208 aa7.16□□□□□ -1.26
CD46-215ENST00000488596 LRRC4BQ9NT99 713 aa7.16□□□□□ -1.26
CD46-215ENST00000488596 CNTNAP5Q8WYK1 1306 aa7.16□□□□□ -1.26
CD46-215ENST00000488596 IGF1RP08069 1367 aa7.16□□□□□ -1.26
CD46-215ENST00000488596 SPATA31C2B4DYI2 1134 aa7.15□□□□□ -1.26
CD46-215ENST00000488596 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
CD46-215ENST00000488596 CDCA7Q9BWT1 371 aaPredicted RBP7.15□□□□□ -1.26
CD46-215ENST00000488596 NDUFB9Q9Y6M9 179 aa7.15□□□□□ -1.26
CD46-215ENST00000488596 H7C1W4 665 aa7.14□□□□□ -1.27
CD46-215ENST00000488596 SOCS7O14512 581 aa7.14□□□□□ -1.27
CD46-215ENST00000488596 ACDQ96AP0 544 aa7.14□□□□□ -1.27
CD46-215ENST00000488596 TIMMDC1Q9NPL8 285 aa7.14□□□□□ -1.27
CD46-215ENST00000488596 CEP126Q9P2H0 1117 aa7.14□□□□□ -1.27
CD46-215ENST00000488596 ZNF330Q9Y3S2 320 aaPredicted RBP7.14□□□□□ -1.27
CD46-215ENST00000488596 WASLO00401 505 aaPredicted RBP7.13□□□□□ -1.27
CD46-215ENST00000488596 IL2RAP01589 272 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 THBS1P07996 1170 aa7.13□□□□□ -1.27
CD46-215ENST00000488596 BCRP11274 1271 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms