RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
TTC3-220ENST00000487711 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
TTC3-220ENST00000487711 ADH1AP07327 375 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 NCOA4Q13772 614 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 MRPL14Q6P1L8 145 aaKnown RBP8.12□□□□□ -1.11
TTC3-220ENST00000487711 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 TSEN34Q9BSV6 310 aaKnown RBP8.12□□□□□ -1.11
TTC3-220ENST00000487711 ATP13A2Q9NQ11 1180 aa8.12□□□□□ -1.11
TTC3-220ENST00000487711 ATP5J2-PTCD1G3V325 749 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 BMP2P12643 396 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 RELBQ01201 579 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 TRIM46Q7Z4K8 759 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 OSBPL3Q9H4L5 887 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 NOD1Q9Y239 953 aa8.11□□□□□ -1.11
TTC3-220ENST00000487711 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
TTC3-220ENST00000487711 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
TTC3-220ENST00000487711 PLEKHM2Q8IWE5 1019 aa8.1□□□□□ -1.11
TTC3-220ENST00000487711 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
TTC3-220ENST00000487711 SERPINA10Q9UK55 444 aa8.1□□□□□ -1.11
TTC3-220ENST00000487711 PTGIRP43119 386 aa8.09□□□□□ -1.11
TTC3-220ENST00000487711 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
TTC3-220ENST00000487711 C1orf115Q9H7X2 142 aa8.09□□□□□ -1.11
TTC3-220ENST00000487711 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
TTC3-220ENST00000487711 ZFP42Q96MM3 310 aa8.08□□□□□ -1.12
TTC3-220ENST00000487711 RFX1P22670 979 aa8.07□□□□□ -1.12
TTC3-220ENST00000487711 GTF2IP78347 998 aa8.07□□□□□ -1.12
TTC3-220ENST00000487711 CFAP70Q5T0N1 1121 aa8.07□□□□□ -1.12
TTC3-220ENST00000487711 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
TTC3-220ENST00000487711 KDF1Q8NAX2 398 aaPredicted RBP8.07□□□□□ -1.12
TTC3-220ENST00000487711 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
TTC3-220ENST00000487711 GMPR2Q9P2T1 348 aaKnown RBP8.07□□□□□ -1.12
TTC3-220ENST00000487711 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
TTC3-220ENST00000487711 MEN1O00255 615 aa8.06□□□□□ -1.12
TTC3-220ENST00000487711 SPINT1O43278 529 aa8.06□□□□□ -1.12
TTC3-220ENST00000487711 GNRH1P01148 92 aa8.06□□□□□ -1.12
TTC3-220ENST00000487711 PSME1Q06323 249 aa8.06□□□□□ -1.12
TTC3-220ENST00000487711 INSM2Q96T92 566 aaPredicted RBP8.06□□□□□ -1.12
TTC3-220ENST00000487711 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
TTC3-220ENST00000487711 A0A1W2PRU2 124 aa8.05□□□□□ -1.12
TTC3-220ENST00000487711 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
TTC3-220ENST00000487711 POLMQ9NP87 494 aaPredicted RBP8.05□□□□□ -1.12
TTC3-220ENST00000487711 RAB6BQ9NRW1 208 aa8.05□□□□□ -1.12
TTC3-220ENST00000487711 C11orf95C9JLR9 678 aaPredicted RBP8.04□□□□□ -1.12
TTC3-220ENST00000487711 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
TTC3-220ENST00000487711 NLRP3Q96P20 1036 aa8.04□□□□□ -1.12
TTC3-220ENST00000487711 VRTNQ9H8Y1 702 aa8.04□□□□□ -1.12
TTC3-220ENST00000487711 PCDHGA11Q9Y5H2 935 aa8.04□□□□□ -1.12
TTC3-220ENST00000487711 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 STAU1O95793 577 aaKnown RBP8.03□□□□□ -1.12
TTC3-220ENST00000487711 RASA1P20936 1047 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 CTSOP43234 321 aaPredicted RBP8.03□□□□□ -1.12
TTC3-220ENST00000487711 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 OGFOD1Q8N543 542 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 TRIM47Q96LD4 638 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 ARID3AQ99856 593 aa8.03□□□□□ -1.12
TTC3-220ENST00000487711 DNAAF2Q9NVR5 837 aaKnown RBP8.03□□□□□ -1.12
TTC3-220ENST00000487711 POTECB2RU33 542 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 GDF10P55107 478 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 CLDN10P78369 228 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 CLN3Q13286 438 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 CDCA8Q53HL2 280 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
TTC3-220ENST00000487711 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
TTC3-220ENST00000487711 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 ZNF594Q96JF6 807 aaPredicted RBP8.02□□□□□ -1.13
TTC3-220ENST00000487711 ETNK1Q9HBU6 452 aa8.02□□□□□ -1.13
TTC3-220ENST00000487711 SOS2Q07890 1332 aaPredicted RBP8.02□□□□□ -1.13
TTC3-220ENST00000487711 MAN1A2O60476 641 aa8.01□□□□□ -1.13
TTC3-220ENST00000487711 IL2RAP01589 272 aa8.01□□□□□ -1.13
TTC3-220ENST00000487711 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
TTC3-220ENST00000487711 ESYT1Q9BSJ8 1104 aa8.01□□□□□ -1.13
TTC3-220ENST00000487711 RBM19Q9Y4C8 960 aaKnown RBP8.01□□□□□ -1.13
TTC3-220ENST00000487711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8□□□□□ -1.13
TTC3-220ENST00000487711 FIGNL2A6NMB9 653 aa8□□□□□ -1.13
TTC3-220ENST00000487711 INHAP05111 366 aa8□□□□□ -1.13
TTC3-220ENST00000487711 SCNN1DP51172 638 aa8□□□□□ -1.13
TTC3-220ENST00000487711 SLC27A3Q5K4L6 730 aa8□□□□□ -1.13
TTC3-220ENST00000487711 ZNF787Q6DD87 383 aa8□□□□□ -1.13
TTC3-220ENST00000487711 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
TTC3-220ENST00000487711 TPCN2Q8NHX9 752 aa8□□□□□ -1.13
TTC3-220ENST00000487711 XAGE2Q96GT9 111 aa8□□□□□ -1.13
TTC3-220ENST00000487711 SERTAD1Q9UHV2 236 aa8□□□□□ -1.13
TTC3-220ENST00000487711 KIAA1024Q9UPX6 916 aa8□□□□□ -1.13
TTC3-220ENST00000487711 RNF144AP50876 292 aaPredicted RBP7.99□□□□□ -1.13
TTC3-220ENST00000487711 CRTC2Q53ET0 693 aaPredicted RBP7.99□□□□□ -1.13
TTC3-220ENST00000487711 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
TTC3-220ENST00000487711 CCDC102BQ68D86 513 aa7.99□□□□□ -1.13
TTC3-220ENST00000487711 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 SOBPA7XYQ1 873 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L15C9J2P7 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L10C9JJH3 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L13C9JLJ4 530 aa7.98□□□□□ -1.13
TTC3-220ENST00000487711 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms