RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 AEBP1Q8IUX7 1158 aa9.13□□□□□ -0.95
SF3A3-206ENST00000487062 EYA1Q99502 592 aa9.13□□□□□ -0.95
SF3A3-206ENST00000487062 ABCC6O95255 1503 aa9.13□□□□□ -0.95
SF3A3-206ENST00000487062 RGPD5Q99666 1765 aa9.13□□□□□ -0.95
SF3A3-206ENST00000487062 RGPD2P0DJD1 1756 aa9.12□□□□□ -0.95
SF3A3-206ENST00000487062 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
SF3A3-206ENST00000487062 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
SF3A3-206ENST00000487062 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
SF3A3-206ENST00000487062 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
SF3A3-206ENST00000487062 SOS2Q07890 1332 aaPredicted RBP9.11□□□□□ -0.95
SF3A3-206ENST00000487062 FANCIQ9NVI1 1328 aa9.11□□□□□ -0.95
SF3A3-206ENST00000487062 PLEKHG5O94827 1062 aa9.11□□□□□ -0.95
SF3A3-206ENST00000487062 IFT57Q9NWB7 429 aa9.11□□□□□ -0.95
SF3A3-206ENST00000487062 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
SF3A3-206ENST00000487062 LTBP4Q8N2S1 1624 aa9.1□□□□□ -0.95
SF3A3-206ENST00000487062 HTATSF1O43719 755 aaKnown RBP9.1□□□□□ -0.95
SF3A3-206ENST00000487062 RTF1Q92541 710 aaKnown RBP9.1□□□□□ -0.95
SF3A3-206ENST00000487062 ZBTB12Q9Y330 459 aaPredicted RBP9.1□□□□□ -0.95
SF3A3-206ENST00000487062 COL18A1P39060 1754 aa9.09□□□□□ -0.95
SF3A3-206ENST00000487062 ABCA3Q99758 1704 aa9.09□□□□□ -0.95
SF3A3-206ENST00000487062 CANXP27824 592 aaKnown RBP9.09□□□□□ -0.95
SF3A3-206ENST00000487062 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
SF3A3-206ENST00000487062 EXOSC9Q06265 439 aaKnown RBP9.09□□□□□ -0.95
SF3A3-206ENST00000487062 ANKRD24Q8TF21 1146 aa9.09□□□□□ -0.95
SF3A3-206ENST00000487062 TSR2Q969E8 191 aaKnown RBP9.09□□□□□ -0.95
SF3A3-206ENST00000487062 ZNF428Q96B54 188 aa9.09□□□□□ -0.95
SF3A3-206ENST00000487062 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
SF3A3-206ENST00000487062 CPDO75976 1380 aa9.09□□□□□ -0.95
SF3A3-206ENST00000487062 ROBO1Q9Y6N7 1651 aa9.08□□□□□ -0.96
SF3A3-206ENST00000487062 PLIN1O60240 522 aa9.08□□□□□ -0.96
SF3A3-206ENST00000487062 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
SF3A3-206ENST00000487062 NBR1Q14596 966 aa9.08□□□□□ -0.96
SF3A3-206ENST00000487062 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
SF3A3-206ENST00000487062 NBPF6Q5VWK0 638 aa9.08□□□□□ -0.96
SF3A3-206ENST00000487062 NBPF4Q96M43 638 aa9.08□□□□□ -0.96
SF3A3-206ENST00000487062 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 AHDC1Q5TGY3 1603 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-206ENST00000487062 GNAT3A8MTJ3 354 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 BCAR3O75815 825 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 MS4A1P11836 297 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 PDE3AQ14432 1141 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 PLEKHO1Q53GL0 409 aaPredicted RBP9.07□□□□□ -0.96
SF3A3-206ENST00000487062 CCDC136Q96JN2 1154 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 VIRMAQ69YN4 1812 aaKnown RBP9.07□□□□□ -0.96
SF3A3-206ENST00000487062 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
SF3A3-206ENST00000487062 ERBB3P21860 1342 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 LRRC37A3O60309 1634 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 TULP1O00294 542 aaPredicted RBP9.06□□□□□ -0.96
SF3A3-206ENST00000487062 DCTN1Q14203 1278 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 ALDH1L2Q3SY69 923 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 AMOTQ4VCS5 1084 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 USHBP1Q8N6Y0 703 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 EXOC6Q8TAG9 804 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 CABLES1Q8TDN4 633 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 LRRC59Q96AG4 307 aaKnown RBP9.06□□□□□ -0.96
SF3A3-206ENST00000487062 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
SF3A3-206ENST00000487062 MAP3K5Q99683 1374 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 PLEKHG2Q9H7P9 1386 aa9.06□□□□□ -0.96
SF3A3-206ENST00000487062 KIAA0232Q92628 1395 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 CSB-PGBD3P0DP91 1061 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 MCM10Q7L590 875 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 HS6ST3Q8IZP7 471 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 FRAT1Q92837 279 aaPredicted RBP9.05□□□□□ -0.96
SF3A3-206ENST00000487062 CRBNQ96SW2 442 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 MBIPQ9NS73 344 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 SMC4Q9NTJ3 1288 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 AXIN2Q9Y2T1 843 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 CRB1P82279 1406 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 KIF16BQ96L93 1317 aa9.05□□□□□ -0.96
SF3A3-206ENST00000487062 CHL1O00533 1208 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 MYT1Q01538 1121 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 ZKSCAN2Q63HK3 967 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 B4GALNT3Q6L9W6 998 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 PLCD3Q8N3E9 789 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 PRDM11Q9NQV5 511 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 BABAM1Q9NWV8 329 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 PHLPP1O60346 1717 aa9.04□□□□□ -0.96
SF3A3-206ENST00000487062 COL22A1Q8NFW1 1626 aaPredicted RBP9.04□□□□□ -0.96
SF3A3-206ENST00000487062 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
SF3A3-206ENST00000487062 TOM1O60784 492 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-206ENST00000487062 AAMPQ13685 434 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 CHRNA2Q15822 529 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-206ENST00000487062 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 C1orf141Q5JVX7 400 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 C20orf194Q5TEA3 1177 aa9.03□□□□□ -0.96
SF3A3-206ENST00000487062 ZNF530Q6P9A1 599 aaPredicted RBP9.03□□□□□ -0.96
SF3A3-206ENST00000487062 PARP4Q9UKK3 1724 aaKnown RBP9.02□□□□□ -0.96
SF3A3-206ENST00000487062 VAMP4O75379 141 aa9.02□□□□□ -0.97
SF3A3-206ENST00000487062 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-206ENST00000487062 TAF7Q15545 349 aaPredicted RBP9.02□□□□□ -0.97
SF3A3-206ENST00000487062 SSH1Q8WYL5 1049 aa9.02□□□□□ -0.97
SF3A3-206ENST00000487062 BCL2L13Q9BXK5 485 aa9.02□□□□□ -0.97
SF3A3-206ENST00000487062 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
SF3A3-206ENST00000487062 OVOS2A0A0G2JMS6 1433 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms