RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 ERLIN1O75477 346 aa17.92■□□□□ 0.46
RXRA-203ENST00000484822 ZNF396Q96N95 335 aaPredicted RBP17.92■□□□□ 0.46
RXRA-203ENST00000484822 DUOX2Q9NRD8 1548 aa17.92■□□□□ 0.46
RXRA-203ENST00000484822 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
RXRA-203ENST00000484822 EIF3JO75822 258 aaKnown RBP17.91■□□□□ 0.46
RXRA-203ENST00000484822 GNAI3P08754 354 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 ME1P48163 572 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 ADGRF5Q8IZF2 1346 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 DEF6Q9H4E7 631 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 EPS15P42566 896 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
RXRA-203ENST00000484822 TAF3Q5VWG9 929 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 CGNQ9P2M7 1197 aaKnown RBP17.9■□□□□ 0.46
RXRA-203ENST00000484822 NSD3Q9BZ95 1437 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 LARP1BQ659C4 914 aaKnown RBP17.9■□□□□ 0.46
RXRA-203ENST00000484822 RIC3Q7Z5B4 369 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 UBXN4Q92575 508 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 FAM193AP78312 1265 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 CCDC102AQ96A19 550 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 CYP46A1Q9Y6A2 500 aa17.9■□□□□ 0.46
RXRA-203ENST00000484822 CHD1LQ86WJ1 897 aa17.89■□□□□ 0.46
RXRA-203ENST00000484822 KRI1Q8N9T8 703 aaKnown RBP17.89■□□□□ 0.45
RXRA-203ENST00000484822 MVPQ14764 893 aaKnown RBP17.89■□□□□ 0.45
RXRA-203ENST00000484822 TWISTNBQ3B726 338 aaPredicted RBP17.89■□□□□ 0.45
RXRA-203ENST00000484822 ZFYVE27Q5T4F4 411 aa17.89■□□□□ 0.45
RXRA-203ENST00000484822 WAPLQ7Z5K2 1190 aa17.89■□□□□ 0.45
RXRA-203ENST00000484822 NUP62CLQ9H1M0 184 aa17.89■□□□□ 0.45
RXRA-203ENST00000484822 AEBP1Q8IUX7 1158 aa17.88■□□□□ 0.45
RXRA-203ENST00000484822 DNAJC2Q99543 621 aaKnown RBP17.88■□□□□ 0.45
RXRA-203ENST00000484822 A2MP01023 1474 aa17.88■□□□□ 0.45
RXRA-203ENST00000484822 PPFIBP1Q86W92 1011 aa17.88■□□□□ 0.45
RXRA-203ENST00000484822 BRMS1Q9HCU9 246 aa17.88■□□□□ 0.45
RXRA-203ENST00000484822 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
RXRA-203ENST00000484822 ODF2Q5BJF6 829 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 NOS1P29475 1434 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 CENPHQ9H3R5 247 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 XBP1P17861 261 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
RXRA-203ENST00000484822 ATF7IPQ6VMQ6 1270 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 SPATA32Q96LK8 384 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 C14orf93Q9H972 538 aaKnown RBP17.86■□□□□ 0.45
RXRA-203ENST00000484822 GOLGA6L10A6NI86 522 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 USP8P40818 1118 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 CEBPAP49715 358 aaPredicted RBP17.86■□□□□ 0.45
RXRA-203ENST00000484822 SCAF11Q99590 1463 aaKnown RBP17.86■□□□□ 0.45
RXRA-203ENST00000484822 STRN4Q9NRL3 753 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 MYO6Q9UM54 1294 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 FCHSD2O94868 740 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 TMCO3Q6UWJ1 677 aa17.86■□□□□ 0.45
RXRA-203ENST00000484822 AMOTL2Q9Y2J4 779 aa17.85■□□□□ 0.45
RXRA-203ENST00000484822 FYB1O15117 783 aa17.85■□□□□ 0.45
RXRA-203ENST00000484822 MAP4K4O95819 1239 aaPredicted RBP17.85■□□□□ 0.45
RXRA-203ENST00000484822 DHX8Q14562 1220 aaKnown RBP17.85■□□□□ 0.45
RXRA-203ENST00000484822 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
RXRA-203ENST00000484822 PRDM11Q9NQV5 511 aa17.85■□□□□ 0.45
RXRA-203ENST00000484822 MAGEC2Q9UBF1 373 aaPredicted RBP17.85■□□□□ 0.45
RXRA-203ENST00000484822 SPG7Q9UQ90 795 aa17.85■□□□□ 0.45
RXRA-203ENST00000484822 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
RXRA-203ENST00000484822 GNAI2P04899 355 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 TOM1L2Q6ZVM7 507 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 TNRQ92752 1358 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
RXRA-203ENST00000484822 ZNF530Q6P9A1 599 aaPredicted RBP17.84■□□□□ 0.45
RXRA-203ENST00000484822 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
RXRA-203ENST00000484822 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 CCDC181Q5TID7 509 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 JMYQ8N9B5 988 aa17.84■□□□□ 0.45
RXRA-203ENST00000484822 CAMK4Q16566 473 aa17.83■□□□□ 0.45
RXRA-203ENST00000484822 UPF3BQ9BZI7 483 aaKnown RBP17.83■□□□□ 0.45
RXRA-203ENST00000484822 WASLO00401 505 aaPredicted RBP17.83■□□□□ 0.44
RXRA-203ENST00000484822 PTPN14Q15678 1187 aa17.83■□□□□ 0.44
RXRA-203ENST00000484822 PTPRKQ15262 1439 aa17.83■□□□□ 0.44
RXRA-203ENST00000484822 RRS1Q15050 365 aaKnown RBP17.83■□□□□ 0.44
RXRA-203ENST00000484822 CCDC43Q96MW1 224 aaKnown RBP17.83■□□□□ 0.44
RXRA-203ENST00000484822 KIF6Q6ZMV9 814 aa17.83■□□□□ 0.44
RXRA-203ENST00000484822 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
RXRA-203ENST00000484822 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
RXRA-203ENST00000484822 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
RXRA-203ENST00000484822 TBC1D2Q9BYX2 928 aa17.82■□□□□ 0.44
RXRA-203ENST00000484822 MAP3K11Q16584 847 aa17.82■□□□□ 0.44
RXRA-203ENST00000484822 C20orf194Q5TEA3 1177 aa17.82■□□□□ 0.44
RXRA-203ENST00000484822 HIP1O00291 1037 aa17.82■□□□□ 0.44
RXRA-203ENST00000484822 LRRCC1Q9C099 1032 aa17.82■□□□□ 0.44
RXRA-203ENST00000484822 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
RXRA-203ENST00000484822 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 GOLGA6L7A0A1B0GV03 622 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 SSFA2P28290 1259 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 TRAPPC8Q9Y2L5 1435 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 IBSPP21815 317 aaPredicted RBP17.81■□□□□ 0.44
RXRA-203ENST00000484822 PIP4K2AP48426 406 aaPredicted RBP17.81■□□□□ 0.44
RXRA-203ENST00000484822 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
RXRA-203ENST00000484822 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms