RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 IP6K1Q92551 441 aa14.52□□□□□ -0.09
SSBP1-210ENST00000481508 PPP1R1BQ9UD71 204 aaPredicted RBP14.52□□□□□ -0.09
SSBP1-210ENST00000481508 KNSTRNQ9Y448 316 aa14.52□□□□□ -0.09
SSBP1-210ENST00000481508 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
SSBP1-210ENST00000481508 ANKRD24Q8TF21 1146 aa14.51□□□□□ -0.09
SSBP1-210ENST00000481508 AMPHP49418 695 aa14.5□□□□□ -0.09
SSBP1-210ENST00000481508 LTV1Q96GA3 475 aaPredicted RBP14.5□□□□□ -0.09
SSBP1-210ENST00000481508 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
SSBP1-210ENST00000481508 SBF2Q86WG5 1849 aa14.5□□□□□ -0.09
SSBP1-210ENST00000481508 TRIM37O94972 964 aa14.49□□□□□ -0.09
SSBP1-210ENST00000481508 CSB-PGBD3P0DP91 1061 aa14.49□□□□□ -0.09
SSBP1-210ENST00000481508 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
SSBP1-210ENST00000481508 HSP90AB2PQ58FF8 381 aa14.49□□□□□ -0.09
SSBP1-210ENST00000481508 CC2D1BQ5T0F9 858 aaKnown RBP14.49□□□□□ -0.09
SSBP1-210ENST00000481508 TOM1L2Q6ZVM7 507 aa14.49□□□□□ -0.09
SSBP1-210ENST00000481508 TCP11L2Q8N4U5 519 aa14.49□□□□□ -0.09
SSBP1-210ENST00000481508 SMG6Q86US8 1419 aaKnown RBP14.49□□□□□ -0.09
SSBP1-210ENST00000481508 C1QTNF8P60827 252 aa14.48□□□□□ -0.09
SSBP1-210ENST00000481508 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
SSBP1-210ENST00000481508 INSRP06213 1382 aa14.47□□□□□ -0.09
SSBP1-210ENST00000481508 FLT4P35916 1363 aa14.47□□□□□ -0.09
SSBP1-210ENST00000481508 SHANK3Q9BYB0 1731 aa14.47□□□□□ -0.09
SSBP1-210ENST00000481508 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
SSBP1-210ENST00000481508 CARD10Q9BWT7 1032 aa14.47□□□□□ -0.09
SSBP1-210ENST00000481508 GOLGB1Q14789 3259 aaKnown RBP14.46□□□□□ -0.09
SSBP1-210ENST00000481508 PPM1GO15355 546 aaPredicted RBP14.46□□□□□ -0.09
SSBP1-210ENST00000481508 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
SSBP1-210ENST00000481508 RGPD3A6NKT7 1758 aaPredicted RBP14.46□□□□□ -0.09
SSBP1-210ENST00000481508 RGPD4Q7Z3J3 1758 aa14.46□□□□□ -0.09
SSBP1-210ENST00000481508 NPC1L1Q9UHC9 1359 aa14.46□□□□□ -0.1
SSBP1-210ENST00000481508 APBA3O96018 575 aa14.45□□□□□ -0.1
SSBP1-210ENST00000481508 SPON1Q9HCB6 807 aa14.45□□□□□ -0.1
SSBP1-210ENST00000481508 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
SSBP1-210ENST00000481508 KIF24Q5T7B8 1368 aa14.45□□□□□ -0.1
SSBP1-210ENST00000481508 USHBP1Q8N6Y0 703 aa14.44□□□□□ -0.1
SSBP1-210ENST00000481508 MEGF6O75095 1541 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 KCNQ2O43526 872 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 DDX10Q13206 875 aaKnown RBP14.43□□□□□ -0.1
SSBP1-210ENST00000481508 NBPF6Q5VWK0 638 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 NBPF4Q96M43 638 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 PARD3Q8TEW0 1356 aa14.43□□□□□ -0.1
SSBP1-210ENST00000481508 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
SSBP1-210ENST00000481508 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
SSBP1-210ENST00000481508 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
SSBP1-210ENST00000481508 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
SSBP1-210ENST00000481508 TNS2Q63HR2 1409 aa14.4□□□□□ -0.1
SSBP1-210ENST00000481508 PKD1L3Q7Z443 1732 aa14.39□□□□□ -0.11
SSBP1-210ENST00000481508 EYA1Q99502 592 aa14.39□□□□□ -0.11
SSBP1-210ENST00000481508 IL2RBP14784 551 aa14.38□□□□□ -0.11
SSBP1-210ENST00000481508 MTHFSP49914 203 aa14.38□□□□□ -0.11
SSBP1-210ENST00000481508 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
SSBP1-210ENST00000481508 DDB1Q16531 1140 aa14.37□□□□□ -0.11
SSBP1-210ENST00000481508 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
SSBP1-210ENST00000481508 MARCH10Q8NA82 808 aaPredicted RBP14.37□□□□□ -0.11
SSBP1-210ENST00000481508 OVOS2A0A0G2JMS6 1433 aa14.37□□□□□ -0.11
SSBP1-210ENST00000481508 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
SSBP1-210ENST00000481508 PDE3BQ13370 1112 aa14.36□□□□□ -0.11
SSBP1-210ENST00000481508 NBPF14Q5TI25 921 aa14.36□□□□□ -0.11
SSBP1-210ENST00000481508 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
SSBP1-210ENST00000481508 PPP2R1AP30153 589 aa14.35□□□□□ -0.11
SSBP1-210ENST00000481508 IL13P35225 146 aa14.35□□□□□ -0.11
SSBP1-210ENST00000481508 FAM196AQ6ZSG2 479 aa14.35□□□□□ -0.11
SSBP1-210ENST00000481508 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
SSBP1-210ENST00000481508 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
SSBP1-210ENST00000481508 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
SSBP1-210ENST00000481508 TOGARAM1Q9Y4F4 1720 aa14.34□□□□□ -0.11
SSBP1-210ENST00000481508 KAT6BQ8WYB5 2073 aa14.34□□□□□ -0.11
SSBP1-210ENST00000481508 NHSQ6T4R5 1651 aa14.33□□□□□ -0.11
SSBP1-210ENST00000481508 EXOC5O00471 708 aa14.33□□□□□ -0.12
SSBP1-210ENST00000481508 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
SSBP1-210ENST00000481508 AEBP1Q8IUX7 1158 aa14.33□□□□□ -0.12
SSBP1-210ENST00000481508 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-210ENST00000481508 PTGER2P43116 358 aa14.31□□□□□ -0.12
SSBP1-210ENST00000481508 FHDC1Q9C0D6 1143 aaPredicted RBP14.31□□□□□ -0.12
SSBP1-210ENST00000481508 BTAF1O14981 1849 aa14.31□□□□□ -0.12
SSBP1-210ENST00000481508 ITGB4P16144 1822 aa14.3□□□□□ -0.12
SSBP1-210ENST00000481508 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
SSBP1-210ENST00000481508 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
SSBP1-210ENST00000481508 RAPGEF4Q8WZA2 1011 aa14.3□□□□□ -0.12
SSBP1-210ENST00000481508 BCL9O00512 1426 aa14.3□□□□□ -0.12
SSBP1-210ENST00000481508 ZCRB1Q8TBF4 217 aaKnown RBP14.29□□□□□ -0.12
SSBP1-210ENST00000481508 DDX54Q8TDD1 881 aaKnown RBP14.29□□□□□ -0.12
SSBP1-210ENST00000481508 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
SSBP1-210ENST00000481508 KDRP35968 1356 aa14.28□□□□□ -0.12
SSBP1-210ENST00000481508 SULT6B1Q6IMI4 303 aa14.28□□□□□ -0.12
SSBP1-210ENST00000481508 CYP27B1O15528 508 aa14.27□□□□□ -0.13
SSBP1-210ENST00000481508 HMOX1P09601 288 aa14.27□□□□□ -0.13
SSBP1-210ENST00000481508 ACSBG1Q96GR2 724 aa14.27□□□□□ -0.13
SSBP1-210ENST00000481508 SYT17Q9BSW7 474 aa14.27□□□□□ -0.13
SSBP1-210ENST00000481508 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.13
SSBP1-210ENST00000481508 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
SSBP1-210ENST00000481508 PCDH11XQ9BZA7 1347 aa14.24□□□□□ -0.13
SSBP1-210ENST00000481508 PCDH11YQ9BZA8 1340 aa14.24□□□□□ -0.13
SSBP1-210ENST00000481508 U2SURPO15042 1029 aaKnown RBP14.24□□□□□ -0.13
SSBP1-210ENST00000481508 RALBP1Q15311 655 aa14.24□□□□□ -0.13
SSBP1-210ENST00000481508 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
SSBP1-210ENST00000481508 SCN11AQ9UI33 1791 aa14.23□□□□□ -0.13
SSBP1-210ENST00000481508 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
SSBP1-210ENST00000481508 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms