RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 NDC80O14777 642 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 DDX46Q7L014 1031 aaKnown RBP12.84□□□□□ -0.35
EWSR1-216ENST00000479135 UBXN4Q92575 508 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
EWSR1-216ENST00000479135 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 SLC4A1P02730 911 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
EWSR1-216ENST00000479135 AIMP1Q12904 312 aaKnown RBP12.84□□□□□ -0.35
EWSR1-216ENST00000479135 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 ZC4H2Q9NQZ6 224 aa12.84□□□□□ -0.35
EWSR1-216ENST00000479135 SMIM23A6NLE4 172 aa12.83□□□□□ -0.35
EWSR1-216ENST00000479135 STK38Q15208 465 aa12.83□□□□□ -0.35
EWSR1-216ENST00000479135 PPP4R3BQ5MIZ7 849 aa12.83□□□□□ -0.35
EWSR1-216ENST00000479135 SF3A3Q12874 501 aaKnown RBP eCLIP12.83□□□□□ -0.364e-7■■■□□ 15.7
EWSR1-216ENST00000479135 CAMK4Q16566 473 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 TSNARE1Q96NA8 513 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
EWSR1-216ENST00000479135 CALCOCO1Q9P1Z2 691 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 KIF27Q86VH2 1401 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 PFDN4Q9NQP4 134 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 TNMDQ9H2S6 317 aa12.83□□□□□ -0.36
EWSR1-216ENST00000479135 PRKG1Q13976 671 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 PPP1R12CQ9BZL4 782 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 HGSO14964 777 aaPredicted RBP12.82□□□□□ -0.36
EWSR1-216ENST00000479135 CPLX3Q8WVH0 158 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 ARHGAP29Q52LW3 1261 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
EWSR1-216ENST00000479135 XAB2Q9HCS7 855 aaKnown RBP12.82□□□□□ -0.36
EWSR1-216ENST00000479135 CCDC158Q5M9N0 1113 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 C10orf67Q8IYJ2 551 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 RSPH3Q86UC2 560 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 ME1P48163 572 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 IGSF3O75054 1194 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 ZFYP08048 801 aaPredicted RBP12.81□□□□□ -0.36
EWSR1-216ENST00000479135 TOP2AP11388 1531 aaKnown RBP12.81□□□□□ -0.36
EWSR1-216ENST00000479135 MMRN2Q9H8L6 949 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 RABGAP1Q9Y3P9 1069 aa12.81□□□□□ -0.36
EWSR1-216ENST00000479135 HSPA4P34932 840 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 USP5P45974 858 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 RBM5P52756 815 aaKnown RBP eCLIP12.8□□□□□ -0.36
EWSR1-216ENST00000479135 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
EWSR1-216ENST00000479135 MKL2Q9ULH7 1088 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
EWSR1-216ENST00000479135 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
EWSR1-216ENST00000479135 REC8O95072 547 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 STIM1Q13586 685 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 RMDN2Q96LZ7 410 aa12.8□□□□□ -0.36
EWSR1-216ENST00000479135 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.364e-8■■□□□ 11.7
EWSR1-216ENST00000479135 ZNF76P36508 570 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 RRP9O43818 475 aaKnown RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 GSDMBQ8TAX9 411 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 SMC6Q96SB8 1091 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 SPINK5Q9NQ38 1064 aaPredicted RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 ODF2LQ9ULJ1 636 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 ZBTB16Q05516 673 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 DNAJC21Q5F1R6 531 aaKnown RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 KTN1Q86UP2 1357 aaKnown RBP12.79□□□□□ -0.36
EWSR1-216ENST00000479135 FOSL2P15408 326 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 FERMT2Q96AC1 680 aa12.79□□□□□ -0.36
EWSR1-216ENST00000479135 GOLIM4O00461 696 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 TSPYL2Q9H2G4 693 aaPredicted RBP12.78□□□□□ -0.36
EWSR1-216ENST00000479135 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.78□□□□□ -0.363e-13■□□□□ 9.4
EWSR1-216ENST00000479135 V9GYY5 206 aaPredicted RBP12.78□□□□□ -0.36
EWSR1-216ENST00000479135 SMIM24O75264 130 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
EWSR1-216ENST00000479135 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.37
EWSR1-216ENST00000479135 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
EWSR1-216ENST00000479135 DBN1Q16643 649 aa12.77□□□□□ -0.37
EWSR1-216ENST00000479135 FOXD1Q16676 465 aa12.77□□□□□ -0.37
EWSR1-216ENST00000479135 ANKFY1Q9P2R3 1169 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 SFMBT1Q9UHJ3 866 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 USH1CQ9Y6N9 552 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 PIK3R5Q8WYR1 880 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 GJC1P36383 396 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
EWSR1-216ENST00000479135 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 SPA17Q15506 151 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
EWSR1-216ENST00000479135 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.76□□□□□ -0.37
EWSR1-216ENST00000479135 TXNDC9O14530 226 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
EWSR1-216ENST00000479135 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
EWSR1-216ENST00000479135 RINLQ6ZS11 566 aa12.75□□□□□ -0.37
EWSR1-216ENST00000479135 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
EWSR1-216ENST00000479135 MAP9Q49MG5 647 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms