RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
CDC42BPA-212ENST00000478573 NANOS1Q8WY41 292 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-212ENST00000478573 ESF1Q9H501 851 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-212ENST00000478573 PCDHB11Q9Y5F2 797 aa8.87□□□□□ -0.99
CDC42BPA-212ENST00000478573 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
CDC42BPA-212ENST00000478573 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
CDC42BPA-212ENST00000478573 ZNF592Q92610 1267 aa8.86□□□□□ -0.99
CDC42BPA-212ENST00000478573 GPR37L1O60883 481 aa8.85□□□□□ -0.99
CDC42BPA-212ENST00000478573 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 SCTRP47872 440 aa8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 NLRP3Q96P20 1036 aa8.84□□□□□ -0.99
CDC42BPA-212ENST00000478573 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
CDC42BPA-212ENST00000478573 SLC27A3Q5K4L6 730 aa8.83□□□□□ -1
CDC42BPA-212ENST00000478573 CYP2U1Q7Z449 544 aa8.83□□□□□ -1
CDC42BPA-212ENST00000478573 CCDC125Q86Z20 511 aa8.83□□□□□ -1
CDC42BPA-212ENST00000478573 SOCS7O14512 581 aa8.82□□□□□ -1
CDC42BPA-212ENST00000478573 TBC1D2BQ9UPU7 963 aa8.82□□□□□ -1
CDC42BPA-212ENST00000478573 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
CDC42BPA-212ENST00000478573 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
CDC42BPA-212ENST00000478573 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
CDC42BPA-212ENST00000478573 SVOPQ8N4V2 548 aa8.8□□□□□ -1
CDC42BPA-212ENST00000478573 CUEDC1Q9NWM3 386 aaPredicted RBP8.8□□□□□ -1
CDC42BPA-212ENST00000478573 GPC1P35052 558 aa8.79□□□□□ -1
CDC42BPA-212ENST00000478573 POU4F2Q12837 409 aa8.79□□□□□ -1
CDC42BPA-212ENST00000478573 GAS2L1Q99501 681 aaPredicted RBP8.79□□□□□ -1
CDC42BPA-212ENST00000478573 OSBPL3Q9H4L5 887 aa8.79□□□□□ -1
CDC42BPA-212ENST00000478573 PRM3Q9NNZ6 103 aa8.79□□□□□ -1
CDC42BPA-212ENST00000478573 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-212ENST00000478573 CLN3Q13286 438 aa8.77□□□□□ -1.01
CDC42BPA-212ENST00000478573 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
CDC42BPA-212ENST00000478573 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
CDC42BPA-212ENST00000478573 CEP126Q9P2H0 1117 aa8.77□□□□□ -1.01
CDC42BPA-212ENST00000478573 GPR25O00155 361 aa8.76□□□□□ -1.01
CDC42BPA-212ENST00000478573 ZNF837Q96EG3 531 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-212ENST00000478573 CCDC85AQ96PX6 553 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-212ENST00000478573 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
CDC42BPA-212ENST00000478573 TRAK2O60296 914 aa8.75□□□□□ -1.01
CDC42BPA-212ENST00000478573 ADAMTS2O95450 1211 aa8.75□□□□□ -1.01
CDC42BPA-212ENST00000478573 EIF4G2P78344 907 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDC42BPA-212ENST00000478573 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
CDC42BPA-212ENST00000478573 ABL2P42684 1182 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 FOXR1Q6PIV2 292 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
CDC42BPA-212ENST00000478573 GNRH1P01148 92 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 GAS6Q14393 721 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 TAS1R3Q7RTX0 852 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 DOLKQ9UPQ8 538 aa8.73□□□□□ -1.01
CDC42BPA-212ENST00000478573 WASLO00401 505 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 PHKA2P46019 1235 aa8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 IRF5Q13568 498 aa8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 DBN1Q16643 649 aa8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 GTPBP3Q969Y2 492 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 TIMMDC1Q9NPL8 285 aa8.72□□□□□ -1.01
CDC42BPA-212ENST00000478573 H7C1W4 665 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 RNF225M0QZC1 329 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 IL2RAP01589 272 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 SRSF11Q05519 484 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 OXLD1Q5BKU9 147 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 RNF135Q8IUD6 432 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 ESYT1Q9BSJ8 1104 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
CDC42BPA-212ENST00000478573 SPATA31C2B4DYI2 1134 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 MAP3K10Q02779 954 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 CENPCQ03188 943 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 TSGA10IPQ3SY00 556 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 LYPD4Q6UWN0 246 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 GMCL1Q96IK5 515 aa8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 ZSCAN10Q96SZ4 725 aaPredicted RBP8.7□□□□□ -1.02
CDC42BPA-212ENST00000478573 MARSP56192 900 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-212ENST00000478573 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
CDC42BPA-212ENST00000478573 TRERF1Q96PN7 1200 aa8.69□□□□□ -1.02
CDC42BPA-212ENST00000478573 MBIPQ9NS73 344 aa8.69□□□□□ -1.02
CDC42BPA-212ENST00000478573 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
CDC42BPA-212ENST00000478573 USP4Q13107 963 aa8.68□□□□□ -1.02
CDC42BPA-212ENST00000478573 GNASQ5JWF2 1037 aa8.68□□□□□ -1.02
CDC42BPA-212ENST00000478573 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
CDC42BPA-212ENST00000478573 GDF11O95390 407 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 F11P03951 625 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 IGF1RP08069 1367 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 RASSF7Q02833 373 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
CDC42BPA-212ENST00000478573 ARHGEF15O94989 841 aa8.66□□□□□ -1.02
CDC42BPA-212ENST00000478573 CELA2BP08218 269 aaPredicted RBP8.66□□□□□ -1.02
CDC42BPA-212ENST00000478573 WDR44Q5JSH3 913 aa8.66□□□□□ -1.02
CDC42BPA-212ENST00000478573 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms