RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 AVPP01185 164 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 TRIM50Q86XT4 487 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 VRTNQ9H8Y1 702 aa7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 MKRN1Q9UHC7 482 aaKnown RBP7.63□□□□□ -1.19
SMARCA1-204ENST00000478420 ATP5J2-PTCD1G3V325 749 aa7.62□□□□□ -1.19
SMARCA1-204ENST00000478420 CTC1Q2NKJ3 1217 aa7.62□□□□□ -1.19
SMARCA1-204ENST00000478420 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 ADD1P35611 737 aaKnown RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 ATP1A2P50993 1020 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 CBLBQ13191 982 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 KANK4Q5T7N3 995 aaPredicted RBP7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 CYP2U1Q7Z449 544 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 PBXIP1Q96AQ6 731 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 OSBPL3Q9H4L5 887 aa7.61□□□□□ -1.19
SMARCA1-204ENST00000478420 PPP1R15AO75807 674 aaPredicted RBP7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 GTF2IP78347 998 aa7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 Q6ZVU0 165 aa7.6□□□□□ -1.19
SMARCA1-204ENST00000478420 AXIN1O15169 862 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 ADH1AP07327 375 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 RASA1P20936 1047 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 SMCPP49901 116 aaPredicted RBP7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 PSME1Q06323 249 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 MEIOBQ8N635 442 aa7.59□□□□□ -1.19
SMARCA1-204ENST00000478420 UPP2O95045 317 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 SRPK2P78362 688 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 OGFOD1Q8N543 542 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 TSEN34Q9BSV6 310 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 DNAAF2Q9NVR5 837 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
SMARCA1-204ENST00000478420 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 GNRH1P01148 92 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 CLDN10P78369 228 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 RELBQ01201 579 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 AGBL1Q96MI9 1066 aa7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-204ENST00000478420 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 LCE2BO14633 110 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 PTGIRP43119 386 aa7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 ZNF594Q96JF6 807 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L15C9J2P7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L13C9JLJ4 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L12C9JPN9 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L11C9JVI0 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L21D6R901 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L18D6R9N7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L22D6RA61 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L17D6RBQ6 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L19D6RCP7 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L20D6RJB6 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ATG7O95352 703 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 USP17L24Q0WX57 530 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 PTK7Q13308 1070 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 SCARF1Q14162 830 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ESCO1Q5FWF5 840 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 CCDC102BQ68D86 513 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ARHGEF10LQ9HCE6 1279 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
SMARCA1-204ENST00000478420 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 BMP2P12643 396 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 BMP1P13497 986 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 KDF1Q8NAX2 398 aaPredicted RBP7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
SMARCA1-204ENST00000478420 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 GDF10P55107 478 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 SIX5Q8N196 739 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 ZNF395Q9H8N7 513 aaPredicted RBP7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 RAB6BQ9NRW1 208 aa7.53□□□□□ -1.2
SMARCA1-204ENST00000478420 MEN1O00255 615 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 SPINT1O43278 529 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 STAU1O95793 577 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 INHAP05111 366 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 SCNN1DP51172 638 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 DPYDQ12882 1025 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 CLN3Q13286 438 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 ELOAQ14241 798 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 PURBQ96QR8 312 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
SMARCA1-204ENST00000478420 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 BACH1O14867 736 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 SEC13P55735 322 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 CNKSR1Q969H4 720 aa7.51□□□□□ -1.21
SMARCA1-204ENST00000478420 ESYT1Q9BSJ8 1104 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms