RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 OXLD1Q5BKU9 147 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 TBC1D9Q6ZT07 1266 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 CDCA7Q9BWT1 371 aaPredicted RBP5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 PPP1R12CQ9BZL4 782 aa5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 TFIP11Q9UBB9 837 aaKnown RBP5.38□□□□□ -1.55
FNDC3B-209ENST00000478016 USP17L3A6NCW0 530 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 USP17L4A6NCW7 530 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 PALM3A6NDB9 673 aaPredicted RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 SUPT5HO00267 1087 aaKnown RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 ADH1AP07327 375 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 ADD1P35611 737 aaKnown RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 SCTRP47872 440 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 NCOA4Q13772 614 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 EML3Q32P44 896 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 USP17L2Q6R6M4 530 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 USP17L1Q7RTZ2 530 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 CYP2U1Q7Z449 544 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 CCDC97Q96F63 343 aaPredicted RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 TSEN34Q9BSV6 310 aaKnown RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 SERPINA10Q9UK55 444 aa5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 MAFBQ9Y5Q3 323 aaPredicted RBP5.37□□□□□ -1.55
FNDC3B-209ENST00000478016 LCE2BO14633 110 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 SCARF1Q14162 830 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 MRPL14Q6P1L8 145 aaKnown RBP5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 DEPDC4Q8N2C3 294 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 OSBPL3Q9H4L5 887 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 ATP13A2Q9NQ11 1180 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 SHROOM4Q9ULL8 1493 aa5.36□□□□□ -1.55
FNDC3B-209ENST00000478016 ATP5J2-PTCD1G3V325 749 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 BMP2P12643 396 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 BMP1P13497 986 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 RELBQ01201 579 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 TRIM46Q7Z4K8 759 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 AGBL1Q96MI9 1066 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 CHMP4AQ9BY43 222 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 C1orf115Q9H7X2 142 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 DACH1Q9UI36 760 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 NOD1Q9Y239 953 aa5.35□□□□□ -1.55
FNDC3B-209ENST00000478016 GNRH1P01148 92 aa5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 HSP90B1P14625 803 aaKnown RBP5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 CDK11BP21127 795 aaKnown RBP5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 LMOD1P29536 600 aaPredicted RBP5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 PTGIRP43119 386 aa5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 CFAP70Q5T0N1 1121 aa5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 TRIM50Q86XT4 487 aa5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 CCDC82Q8N4S0 544 aa5.34□□□□□ -1.55
FNDC3B-209ENST00000478016 SPINT1O43278 529 aa5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 BRD2P25440 801 aaKnown RBP5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 C6orf118Q5T5N4 469 aa5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 KDF1Q8NAX2 398 aaPredicted RBP5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 ZFP42Q96MM3 310 aa5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 PURBQ96QR8 312 aaKnown RBP5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 SENP2Q9HC62 589 aa5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 MKRN1Q9UHC7 482 aaKnown RBP5.33□□□□□ -1.56
FNDC3B-209ENST00000478016 A0A1W2PRU2 124 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 ATP1A2P50993 1020 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 GTF2IP78347 998 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 PSME1Q06323 249 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 ESCO1Q5FWF5 840 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 KIFC2Q96AC6 838 aa5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 ZNF395Q9H8N7 513 aaPredicted RBP5.32□□□□□ -1.56
FNDC3B-209ENST00000478016 RFX1P22670 979 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 CLN3Q13286 438 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 KANK4Q5T7N3 995 aaPredicted RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 FAM9AQ8IZU1 332 aaPredicted RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 OGFOD1Q8N543 542 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 TRIM47Q96LD4 638 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 NLRP3Q96P20 1036 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 INSM2Q96T92 566 aaPredicted RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 VRTNQ9H8Y1 702 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 ARHGEF10LQ9HCE6 1279 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 DNAAF2Q9NVR5 837 aaKnown RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 GMPR2Q9P2T1 348 aaKnown RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 CCDC9Q9Y3X0 531 aaKnown RBP5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 PCDHGA11Q9Y5H2 935 aa5.31□□□□□ -1.56
FNDC3B-209ENST00000478016 TTLL8A6PVC2 850 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 MEN1O00255 615 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 RASA1P20936 1047 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 SCNN1DP51172 638 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 GDF10P55107 478 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 CLDN10P78369 228 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 LARP1Q6PKG0 1096 aaKnown RBP5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 LARGE2Q8N3Y3 721 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 PUS7Q96PZ0 661 aaKnown RBP5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 ESYT1Q9BSJ8 1104 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 POLMQ9NP87 494 aaPredicted RBP5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 RAB6BQ9NRW1 208 aa5.3□□□□□ -1.56
FNDC3B-209ENST00000478016 SOS2Q07890 1332 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 FAM196BA6NMK8 535 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 C11orf95C9JLR9 678 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 WASLO00401 505 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 IL2RAP01589 272 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 GPC1P35052 558 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 CTSOP43234 321 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 CCDC102BQ68D86 513 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 TPCN2Q8NHX9 752 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 CNKSR1Q969H4 720 aa5.29□□□□□ -1.56
FNDC3B-209ENST00000478016 PBXIP1Q96AQ6 731 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms