RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 KLF16Q9BXK1 252 aaPredicted RBP10.88□□□□□ -0.67
TM9SF3-204ENST00000475401 ATP5J2-PTCD1G3V325 749 aa10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 AXIN1O15169 862 aa10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 ATP1A2P50993 1020 aa10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 CFAP70Q5T0N1 1121 aa10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 VRTNQ9H8Y1 702 aa10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
TM9SF3-204ENST00000475401 LILRA1O75019 489 aa10.86□□□□□ -0.67
TM9SF3-204ENST00000475401 SCTRP47872 440 aa10.86□□□□□ -0.67
TM9SF3-204ENST00000475401 PSME1Q06323 249 aa10.86□□□□□ -0.67
TM9SF3-204ENST00000475401 Q6ZNB5 142 aa10.86□□□□□ -0.67
TM9SF3-204ENST00000475401 RBM19Q9Y4C8 960 aaKnown RBP10.86□□□□□ -0.67
TM9SF3-204ENST00000475401 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
TM9SF3-204ENST00000475401 ADH1AP07327 375 aa10.84□□□□□ -0.67
TM9SF3-204ENST00000475401 CBLBQ13191 982 aa10.84□□□□□ -0.67
TM9SF3-204ENST00000475401 LARP1Q6PKG0 1096 aaKnown RBP10.84□□□□□ -0.67
TM9SF3-204ENST00000475401 Q6ZVU0 165 aa10.84□□□□□ -0.67
TM9SF3-204ENST00000475401 RASA1P20936 1047 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 GTF2IP78347 998 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 SCARF1Q14162 830 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 CRIPAKQ8N1N5 446 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 PBXIP1Q96AQ6 731 aa10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
TM9SF3-204ENST00000475401 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
TM9SF3-204ENST00000475401 ACIN1Q9UKV3 1341 aaKnown RBP10.82□□□□□ -0.68
TM9SF3-204ENST00000475401 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
TM9SF3-204ENST00000475401 GNRH1P01148 92 aa10.81□□□□□ -0.68
TM9SF3-204ENST00000475401 ADD1P35611 737 aaKnown RBP10.81□□□□□ -0.68
TM9SF3-204ENST00000475401 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
TM9SF3-204ENST00000475401 RELBQ01201 579 aa10.8□□□□□ -0.68
TM9SF3-204ENST00000475401 ESCO1Q5FWF5 840 aa10.8□□□□□ -0.68
TM9SF3-204ENST00000475401 OGFOD1Q8N543 542 aa10.8□□□□□ -0.68
TM9SF3-204ENST00000475401 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 PTGIRP43119 386 aa10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 LINC00528Q8N1L1 170 aa10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 AGBL1Q96MI9 1066 aa10.79□□□□□ -0.68
TM9SF3-204ENST00000475401 BMP2P12643 396 aa10.78□□□□□ -0.68
TM9SF3-204ENST00000475401 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
TM9SF3-204ENST00000475401 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
TM9SF3-204ENST00000475401 AAASQ9NRG9 546 aa10.78□□□□□ -0.68
TM9SF3-204ENST00000475401 FAM196BA6NMK8 535 aa10.77□□□□□ -0.69
TM9SF3-204ENST00000475401 ST8SIA5O15466 376 aa10.77□□□□□ -0.69
TM9SF3-204ENST00000475401 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
TM9SF3-204ENST00000475401 NLRP3Q96P20 1036 aa10.77□□□□□ -0.69
TM9SF3-204ENST00000475401 PCDHGA11Q9Y5H2 935 aa10.77□□□□□ -0.69
TM9SF3-204ENST00000475401 MEN1O00255 615 aa10.76□□□□□ -0.69
TM9SF3-204ENST00000475401 C6orf118Q5T5N4 469 aa10.76□□□□□ -0.69
TM9SF3-204ENST00000475401 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
TM9SF3-204ENST00000475401 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
TM9SF3-204ENST00000475401 BMP1P13497 986 aa10.75□□□□□ -0.69
TM9SF3-204ENST00000475401 CLDN10P78369 228 aa10.75□□□□□ -0.69
TM9SF3-204ENST00000475401 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
TM9SF3-204ENST00000475401 TPCN2Q8NHX9 752 aa10.75□□□□□ -0.69
TM9SF3-204ENST00000475401 A0A1W2PRU2 124 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L15C9J2P7 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L10C9JJH3 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L13C9JLJ4 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L11C9JVI0 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L21D6R901 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L18D6R9N7 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L22D6RA61 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L17D6RBQ6 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L19D6RCP7 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L20D6RJB6 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 BACH1O14867 736 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 GDF10P55107 478 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 USP17L24Q0WX57 530 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 ATP13A2Q9NQ11 1180 aa10.74□□□□□ -0.69
TM9SF3-204ENST00000475401 GTF2E1P29083 439 aaPredicted RBP10.73□□□□□ -0.69
TM9SF3-204ENST00000475401 CLN3Q13286 438 aa10.73□□□□□ -0.69
TM9SF3-204ENST00000475401 POLMQ9NP87 494 aaPredicted RBP10.73□□□□□ -0.69
TM9SF3-204ENST00000475401 RAB6BQ9NRW1 208 aa10.73□□□□□ -0.69
TM9SF3-204ENST00000475401 SPINT1O43278 529 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 ATG7O95352 703 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 PTK7Q13308 1070 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 CRTC2Q53ET0 693 aaPredicted RBP10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 ANKMY2Q8IV38 441 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 SIX5Q8N196 739 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
TM9SF3-204ENST00000475401 ZBTB7BO15156 539 aaPredicted RBP10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 INHAP05111 366 aa10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 SEC13P55735 322 aa10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 ESYT1Q9BSJ8 1104 aa10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 ETNK1Q9HBU6 452 aa10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 NOVA2Q9UNW9 492 aaKnown RBP10.71□□□□□ -0.69
TM9SF3-204ENST00000475401 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
TM9SF3-204ENST00000475401 CSB-PGBD3P0DP91 1061 aa10.7□□□□□ -0.7
TM9SF3-204ENST00000475401 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
TM9SF3-204ENST00000475401 KDF1Q8NAX2 398 aaPredicted RBP10.7□□□□□ -0.7
TM9SF3-204ENST00000475401 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
TM9SF3-204ENST00000475401 ZFP42Q96MM3 310 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms