RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 PKDCCQ504Y2 493 aa11.08□□□□□ -0.64
CLK1-209ENST00000472679 NOD1Q9Y239 953 aa11.07□□□□□ -0.64
CLK1-209ENST00000472679 CAPN5O15484 640 aaPredicted RBP11.06□□□□□ -0.64
CLK1-209ENST00000472679 MYCP01106 439 aaPredicted RBP11.06□□□□□ -0.64
CLK1-209ENST00000472679 LAPTM4AQ15012 233 aa11.06□□□□□ -0.64
CLK1-209ENST00000472679 VRTNQ9H8Y1 702 aa11.06□□□□□ -0.64
CLK1-209ENST00000472679 PCDHGA11Q9Y5H2 935 aa11.06□□□□□ -0.64
CLK1-209ENST00000472679 CLDN10P78369 228 aa11.05□□□□□ -0.64
CLK1-209ENST00000472679 Q6ZVU0 165 aa11.05□□□□□ -0.64
CLK1-209ENST00000472679 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
CLK1-209ENST00000472679 AGBL1Q96MI9 1066 aa11.05□□□□□ -0.64
CLK1-209ENST00000472679 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
CLK1-209ENST00000472679 GTF2IP78347 998 aa11.04□□□□□ -0.64
CLK1-209ENST00000472679 PBXIP1Q96AQ6 731 aa11.04□□□□□ -0.64
CLK1-209ENST00000472679 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
CLK1-209ENST00000472679 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
CLK1-209ENST00000472679 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
CLK1-209ENST00000472679 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
CLK1-209ENST00000472679 CRTC2Q53ET0 693 aaPredicted RBP11.03□□□□□ -0.64
CLK1-209ENST00000472679 OGFOD1Q8N543 542 aa11.03□□□□□ -0.64
CLK1-209ENST00000472679 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
CLK1-209ENST00000472679 ADH1AP07327 375 aa11.02□□□□□ -0.65
CLK1-209ENST00000472679 RASA1P20936 1047 aa11.02□□□□□ -0.65
CLK1-209ENST00000472679 MEIOBQ8N635 442 aa11.02□□□□□ -0.65
CLK1-209ENST00000472679 ST8SIA5O15466 376 aa11.01□□□□□ -0.65
CLK1-209ENST00000472679 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
CLK1-209ENST00000472679 DNAAF2Q9NVR5 837 aaKnown RBP11.01□□□□□ -0.65
CLK1-209ENST00000472679 SMCPP49901 116 aaPredicted RBP11□□□□□ -0.65
CLK1-209ENST00000472679 RELBQ01201 579 aa11□□□□□ -0.65
CLK1-209ENST00000472679 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
CLK1-209ENST00000472679 ZNF594Q96JF6 807 aaPredicted RBP11□□□□□ -0.65
CLK1-209ENST00000472679 AXIN1O15169 862 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 BMP1P13497 986 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 PTK7Q13308 1070 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 CTC1Q2NKJ3 1217 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 TRIM52Q96A61 297 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 ZNF395Q9H8N7 513 aaPredicted RBP10.99□□□□□ -0.65
CLK1-209ENST00000472679 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
CLK1-209ENST00000472679 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L21D6R901 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
CLK1-209ENST00000472679 DKK1O94907 266 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 PTGIRP43119 386 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 ATP1A2P50993 1020 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 SCNN1DP51172 638 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 PSME1Q06323 249 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 LARP1Q6PKG0 1096 aaKnown RBP10.98□□□□□ -0.65
CLK1-209ENST00000472679 RAB6BQ9NRW1 208 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 DACH1Q9UI36 760 aa10.98□□□□□ -0.65
CLK1-209ENST00000472679 FAM196BA6NMK8 535 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 LCE2BO14633 110 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 TRIM46Q7Z4K8 759 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 LARGE2Q8N3Y3 721 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 TPCN2Q8NHX9 752 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
CLK1-209ENST00000472679 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
CLK1-209ENST00000472679 ATG7O95352 703 aa10.96□□□□□ -0.65
CLK1-209ENST00000472679 GNRH1P01148 92 aa10.96□□□□□ -0.65
CLK1-209ENST00000472679 CCDC102BQ68D86 513 aa10.96□□□□□ -0.65
CLK1-209ENST00000472679 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.65
CLK1-209ENST00000472679 A0A1W2PRU2 124 aa10.95□□□□□ -0.66
CLK1-209ENST00000472679 MRPL14Q6P1L8 145 aaKnown RBP10.95□□□□□ -0.66
CLK1-209ENST00000472679 SIX5Q8N196 739 aa10.95□□□□□ -0.66
CLK1-209ENST00000472679 ARXQ96QS3 562 aa10.95□□□□□ -0.66
CLK1-209ENST00000472679 TSEN34Q9BSV6 310 aaKnown RBP10.95□□□□□ -0.66
CLK1-209ENST00000472679 ZMIZ1Q9ULJ6 1067 aa10.95□□□□□ -0.66
CLK1-209ENST00000472679 IL2RAP01589 272 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 GDF10P55107 478 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 DPYDQ12882 1025 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 C6orf118Q5T5N4 469 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 Q6ZNB5 142 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
CLK1-209ENST00000472679 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK1-209ENST00000472679 NOVA2Q9UNW9 492 aaKnown RBP10.94□□□□□ -0.66
CLK1-209ENST00000472679 SFI1A8K8P3 1242 aa10.93□□□□□ -0.66
CLK1-209ENST00000472679 STK32AQ8WU08 396 aa10.93□□□□□ -0.66
CLK1-209ENST00000472679 PURBQ96QR8 312 aaKnown RBP10.93□□□□□ -0.66
CLK1-209ENST00000472679 INHAP05111 366 aa10.92□□□□□ -0.66
CLK1-209ENST00000472679 BMP2P12643 396 aa10.92□□□□□ -0.66
CLK1-209ENST00000472679 INSM2Q96T92 566 aaPredicted RBP10.92□□□□□ -0.66
CLK1-209ENST00000472679 ZNF358Q9NW07 568 aa10.92□□□□□ -0.66
CLK1-209ENST00000472679 SERTAD1Q9UHV2 236 aa10.92□□□□□ -0.66
CLK1-209ENST00000472679 ACIN1Q9UKV3 1341 aaKnown RBP10.91□□□□□ -0.66
CLK1-209ENST00000472679 MEN1O00255 615 aa10.91□□□□□ -0.66
CLK1-209ENST00000472679 SPINT1O43278 529 aa10.91□□□□□ -0.66
CLK1-209ENST00000472679 CLN3Q13286 438 aa10.91□□□□□ -0.66
CLK1-209ENST00000472679 ELOAQ14241 798 aaKnown RBP10.91□□□□□ -0.66
CLK1-209ENST00000472679 XAGE2Q96GT9 111 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms