RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 STRN4Q9NRL3 753 aa25.56■■□□□ 1.68
CHMP2B-204ENST00000472024 DLG5Q8TDM6 1919 aa25.56■■□□□ 1.68
CHMP2B-204ENST00000472024 HTATSF1O43719 755 aaKnown RBP25.55■■□□□ 1.68
CHMP2B-204ENST00000472024 LMOD3Q0VAK6 560 aa25.55■■□□□ 1.68
CHMP2B-204ENST00000472024 WDR63Q8IWG1 891 aa25.55■■□□□ 1.68
CHMP2B-204ENST00000472024 RAPGEF4Q8WZA2 1011 aa25.55■■□□□ 1.68
CHMP2B-204ENST00000472024 RRP7AQ9Y3A4 280 aaKnown RBP25.55■■□□□ 1.68
CHMP2B-204ENST00000472024 PLEKHO1Q53GL0 409 aaPredicted RBP25.54■■□□□ 1.68
CHMP2B-204ENST00000472024 THRAP3Q9Y2W1 955 aaKnown RBP25.54■■□□□ 1.68
CHMP2B-204ENST00000472024 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 TATP17735 454 aaPredicted RBP25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 VPS72Q15906 364 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 C8orf37Q96NL8 207 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 IL16Q14005 1332 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 SPATA31A1Q5TZJ5 1347 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 SPATA31A5Q5VU36 1347 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 SPATA31A7Q8IWB4 1347 aa25.53■■□□□ 1.68
CHMP2B-204ENST00000472024 ADAMTS7Q9UKP4 1686 aa25.52■■□□□ 1.68
CHMP2B-204ENST00000472024 LRRC37A3O60309 1634 aa25.5■■□□□ 1.67
CHMP2B-204ENST00000472024 IL2RBP14784 551 aa25.5■■□□□ 1.67
CHMP2B-204ENST00000472024 TRMT2AQ8IZ69 625 aaKnown RBP25.5■■□□□ 1.67
CHMP2B-204ENST00000472024 MAP3K5Q99683 1374 aa25.5■■□□□ 1.67
CHMP2B-204ENST00000472024 SENP3-EIF4A1A0A087X0R7 540 aa25.49■■□□□ 1.67
CHMP2B-204ENST00000472024 GOLGA2Q08379 1002 aa25.49■■□□□ 1.67
CHMP2B-204ENST00000472024 NEUROD2Q15784 382 aa25.49■■□□□ 1.67
CHMP2B-204ENST00000472024 CDCA7Q9BWT1 371 aaPredicted RBP25.49■■□□□ 1.67
CHMP2B-204ENST00000472024 SALL2Q9Y467 1007 aaPredicted RBP25.49■■□□□ 1.67
CHMP2B-204ENST00000472024 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
CHMP2B-204ENST00000472024 AKAP4Q5JQC9 854 aa25.48■■□□□ 1.67
CHMP2B-204ENST00000472024 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
CHMP2B-204ENST00000472024 ATRNO75882 1429 aa25.47■■□□□ 1.67
CHMP2B-204ENST00000472024 SPG7Q9UQ90 795 aa25.47■■□□□ 1.67
CHMP2B-204ENST00000472024 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 CEMIPQ8WUJ3 1361 aa25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 GNAT3A8MTJ3 354 aa25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 CALD1Q05682 793 aaKnown RBP25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 SLFN5Q08AF3 891 aa25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 MEX3CQ5U5Q3 659 aaKnown RBP25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 USP21Q9UK80 565 aa25.46■■□□□ 1.67
CHMP2B-204ENST00000472024 AFF2P51816 1311 aa25.45■■□□□ 1.66
CHMP2B-204ENST00000472024 E9PSI1 815 aa25.45■■□□□ 1.66
CHMP2B-204ENST00000472024 ZNF530Q6P9A1 599 aaPredicted RBP25.44■■□□□ 1.66
CHMP2B-204ENST00000472024 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
CHMP2B-204ENST00000472024 ZCRB1Q8TBF4 217 aaKnown RBP25.42■■□□□ 1.66
CHMP2B-204ENST00000472024 CDCA7LQ96GN5 454 aa25.42■■□□□ 1.66
CHMP2B-204ENST00000472024 SPINK5Q9NQ38 1064 aaPredicted RBP25.42■■□□□ 1.66
CHMP2B-204ENST00000472024 TNS2Q63HR2 1409 aa25.42■■□□□ 1.66
CHMP2B-204ENST00000472024 PCDH11XQ9BZA7 1347 aa25.41■■□□□ 1.66
CHMP2B-204ENST00000472024 PCDH11YQ9BZA8 1340 aa25.41■■□□□ 1.66
CHMP2B-204ENST00000472024 PHKG2P15735 406 aa25.41■■□□□ 1.66
CHMP2B-204ENST00000472024 DUSP27Q5VZP5 1158 aa25.41■■□□□ 1.66
CHMP2B-204ENST00000472024 CYP27B1O15528 508 aa25.4■■□□□ 1.66
CHMP2B-204ENST00000472024 NKX1-1Q15270 411 aaPredicted RBP25.4■■□□□ 1.66
CHMP2B-204ENST00000472024 IFNL2Q8IZJ0 200 aa25.4■■□□□ 1.66
CHMP2B-204ENST00000472024 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
CHMP2B-204ENST00000472024 IFT57Q9NWB7 429 aa25.4■■□□□ 1.66
CHMP2B-204ENST00000472024 GLI3P10071 1580 aa25.39■■□□□ 1.66
CHMP2B-204ENST00000472024 THSD7AQ9UPZ6 1657 aa25.39■■□□□ 1.66
CHMP2B-204ENST00000472024 C1orf141Q5JVX7 400 aa25.39■■□□□ 1.66
CHMP2B-204ENST00000472024 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
CHMP2B-204ENST00000472024 MRC1P22897 1456 aa25.39■■□□□ 1.65
CHMP2B-204ENST00000472024 HSP90AB1P08238 724 aaKnown RBP25.38■■□□□ 1.65
CHMP2B-204ENST00000472024 BABAM1Q9NWV8 329 aa25.38■■□□□ 1.65
CHMP2B-204ENST00000472024 TRPC5Q9UL62 973 aaPredicted RBP25.38■■□□□ 1.65
CHMP2B-204ENST00000472024 KDM6AO15550 1401 aaPredicted RBP25.37■■□□□ 1.65
CHMP2B-204ENST00000472024 USP35Q9P2H5 1018 aa25.37■■□□□ 1.65
CHMP2B-204ENST00000472024 SCN11AQ9UI33 1791 aa25.36■■□□□ 1.65
CHMP2B-204ENST00000472024 MCM10Q7L590 875 aa25.36■■□□□ 1.65
CHMP2B-204ENST00000472024 CFAP44Q96MT7 982 aa25.36■■□□□ 1.65
CHMP2B-204ENST00000472024 MYH16Q9H6N6 1097 aa25.36■■□□□ 1.65
CHMP2B-204ENST00000472024 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
CHMP2B-204ENST00000472024 ONECUT3O60422 494 aaPredicted RBP25.35■■□□□ 1.65
CHMP2B-204ENST00000472024 GNAI1P63096 354 aa25.35■■□□□ 1.65
CHMP2B-204ENST00000472024 DCTN1Q14203 1278 aa25.35■■□□□ 1.65
CHMP2B-204ENST00000472024 THUMPD2Q9BTF0 503 aaKnown RBP25.35■■□□□ 1.65
CHMP2B-204ENST00000472024 CHL1O00533 1208 aa25.34■■□□□ 1.65
CHMP2B-204ENST00000472024 DCAF5Q96JK2 942 aa25.34■■□□□ 1.65
CHMP2B-204ENST00000472024 GJD4Q96KN9 370 aaPredicted RBP25.34■■□□□ 1.65
CHMP2B-204ENST00000472024 VIRMAQ69YN4 1812 aaKnown RBP25.34■■□□□ 1.65
CHMP2B-204ENST00000472024 SIPA1L3O60292 1781 aaPredicted RBP25.33■■□□□ 1.65
CHMP2B-204ENST00000472024 FANCIQ9NVI1 1328 aa25.32■■□□□ 1.64
CHMP2B-204ENST00000472024 EXOC5O00471 708 aa25.31■■□□□ 1.64
CHMP2B-204ENST00000472024 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
CHMP2B-204ENST00000472024 LGR6Q9HBX8 967 aa25.31■■□□□ 1.64
CHMP2B-204ENST00000472024 CCDC9Q9Y3X0 531 aaKnown RBP25.31■■□□□ 1.64
CHMP2B-204ENST00000472024 MPRIPQ6WCQ1 1025 aa25.3■■□□□ 1.64
CHMP2B-204ENST00000472024 TAF7Q15545 349 aaPredicted RBP25.28■■□□□ 1.64
CHMP2B-204ENST00000472024 DDB1Q16531 1140 aa25.28■■□□□ 1.64
CHMP2B-204ENST00000472024 ERVV-2B6SEH9 535 aa25.27■■□□□ 1.64
CHMP2B-204ENST00000472024 CT47B1P0C2W7 299 aaPredicted RBP25.27■■□□□ 1.64
CHMP2B-204ENST00000472024 FAM98CQ17RN3 349 aaKnown RBP25.27■■□□□ 1.64
CHMP2B-204ENST00000472024 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
CHMP2B-204ENST00000472024 MBIPQ9NS73 344 aa25.27■■□□□ 1.64
CHMP2B-204ENST00000472024 KDM3BQ7LBC6 1761 aa25.26■■□□□ 1.63
CHMP2B-204ENST00000472024 TOGARAM1Q9Y4F4 1720 aa25.26■■□□□ 1.63
CHMP2B-204ENST00000472024 SLC52A2Q9HAB3 445 aa25.25■■□□□ 1.63
CHMP2B-204ENST00000472024 BCL9O00512 1426 aa25.25■■□□□ 1.63
CHMP2B-204ENST00000472024 TSR2Q969E8 191 aaKnown RBP25.24■■□□□ 1.63
CHMP2B-204ENST00000472024 TEFQ10587 303 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms