RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
SMC1A-205ENST00000469129 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 ARHGEF25Q86VW2 580 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 LAS1LQ9Y4W2 734 aaKnown RBP12□□□□□ -0.49
SMC1A-205ENST00000469129 OVOS2A0A0G2JMS6 1433 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 PHLPP1O60346 1717 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
SMC1A-205ENST00000469129 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
SMC1A-205ENST00000469129 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
SMC1A-205ENST00000469129 KIAA0232Q92628 1395 aa11.99□□□□□ -0.49
SMC1A-205ENST00000469129 CRB1P82279 1406 aa11.98□□□□□ -0.49
SMC1A-205ENST00000469129 SPATA31A3Q5VYP0 1347 aa11.98□□□□□ -0.49
SMC1A-205ENST00000469129 IPO8O15397 1037 aaKnown RBP11.98□□□□□ -0.49
SMC1A-205ENST00000469129 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
SMC1A-205ENST00000469129 MBIPQ9NS73 344 aa11.98□□□□□ -0.49
SMC1A-205ENST00000469129 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 CPDO75976 1380 aa11.97□□□□□ -0.49
SMC1A-205ENST00000469129 ZBTB7CA1YPR0 619 aa11.97□□□□□ -0.49
SMC1A-205ENST00000469129 BRPF1P55201 1214 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 BRINP3Q76B58 766 aa11.97□□□□□ -0.49
SMC1A-205ENST00000469129 LTV1Q96GA3 475 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
SMC1A-205ENST00000469129 GNAT3A8MTJ3 354 aa11.96□□□□□ -0.49
SMC1A-205ENST00000469129 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
SMC1A-205ENST00000469129 THUMPD2Q9BTF0 503 aaKnown RBP11.96□□□□□ -0.49
SMC1A-205ENST00000469129 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
SMC1A-205ENST00000469129 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
SMC1A-205ENST00000469129 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
SMC1A-205ENST00000469129 ANKRD24Q8TF21 1146 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 SSH1Q8WYL5 1049 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 CLUAP1Q96AJ1 413 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 BCL2L13Q9BXK5 485 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
SMC1A-205ENST00000469129 ERBB3P21860 1342 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 SOS2Q07890 1332 aaPredicted RBP11.94□□□□□ -0.5
SMC1A-205ENST00000469129 CHL1O00533 1208 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 ATF7IPQ6VMQ6 1270 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 MCM10Q7L590 875 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
SMC1A-205ENST00000469129 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 WNK3Q9BYP7 1800 aa11.94□□□□□ -0.5
SMC1A-205ENST00000469129 COL14A1Q05707 1796 aaKnown RBP11.94□□□□□ -0.5
SMC1A-205ENST00000469129 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
SMC1A-205ENST00000469129 PLEKHO1Q53GL0 409 aaPredicted RBP11.93□□□□□ -0.5
SMC1A-205ENST00000469129 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 ARHGAP45Q92619 1136 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 DDX19BQ9UMR2 479 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 COG6Q9Y2V7 657 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
SMC1A-205ENST00000469129 JCADQ9P266 1359 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 KDM2BQ8NHM5 1336 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 VAMP4O75379 141 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 NBPF6Q5VWK0 638 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 USHBP1Q8N6Y0 703 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 NBPF4Q96M43 638 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 TSPYL4Q9UJ04 414 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
SMC1A-205ENST00000469129 TRIM27P14373 513 aa11.91□□□□□ -0.5
SMC1A-205ENST00000469129 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
SMC1A-205ENST00000469129 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 ZC3H6P61129 1189 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
SMC1A-205ENST00000469129 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
SMC1A-205ENST00000469129 MRPL50Q8N5N7 158 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 DDX17Q92841 729 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 LRRC59Q96AG4 307 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
SMC1A-205ENST00000469129 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 NOB1Q9ULX3 412 aaKnown RBP11.9□□□□□ -0.5
SMC1A-205ENST00000469129 MRC1P22897 1456 aa11.89□□□□□ -0.51
SMC1A-205ENST00000469129 SHANK3Q9BYB0 1731 aa11.89□□□□□ -0.51
SMC1A-205ENST00000469129 RLBP1P12271 317 aa11.89□□□□□ -0.51
SMC1A-205ENST00000469129 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
SMC1A-205ENST00000469129 ITPRIPQ8IWB1 547 aa11.89□□□□□ -0.51
SMC1A-205ENST00000469129 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
SMC1A-205ENST00000469129 PTPRCP08575 1304 aa11.88□□□□□ -0.51
SMC1A-205ENST00000469129 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
SMC1A-205ENST00000469129 TSPYL6Q8N831 410 aa11.88□□□□□ -0.51
SMC1A-205ENST00000469129 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
SMC1A-205ENST00000469129 PXDNLA1KZ92 1463 aa11.88□□□□□ -0.51
SMC1A-205ENST00000469129 COL5A2P05997 1499 aaPredicted RBP11.88□□□□□ -0.51
SMC1A-205ENST00000469129 ABCC4O15439 1325 aa11.87□□□□□ -0.51
SMC1A-205ENST00000469129 MEGF6O75095 1541 aa11.87□□□□□ -0.51
SMC1A-205ENST00000469129 CSB-PGBD3P0DP91 1061 aa11.87□□□□□ -0.51
SMC1A-205ENST00000469129 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-205ENST00000469129 TAF7Q15545 349 aaPredicted RBP11.87□□□□□ -0.51
SMC1A-205ENST00000469129 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
SMC1A-205ENST00000469129 TEFQ10587 303 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 STK31Q9BXU1 1019 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 RWDD1Q9H446 243 aaPredicted RBP11.86□□□□□ -0.51
SMC1A-205ENST00000469129 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
SMC1A-205ENST00000469129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms