RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
SCFD1-205ENST00000469043 ZNF592Q92610 1267 aa9.13□□□□□ -0.95
SCFD1-205ENST00000469043 GDF11O95390 407 aa9.11□□□□□ -0.95
SCFD1-205ENST00000469043 RASSF7Q02833 373 aa9.11□□□□□ -0.95
SCFD1-205ENST00000469043 ZNF330Q9Y3S2 320 aaPredicted RBP9.11□□□□□ -0.95
SCFD1-205ENST00000469043 MEN1O00255 615 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 FBXO45P0C2W1 286 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 GPC1P35052 558 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 FOXR1Q6PIV2 292 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 KCTD17Q8N5Z5 321 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 GMCL1Q96IK5 515 aa9.1□□□□□ -0.95
SCFD1-205ENST00000469043 GJD4Q96KN9 370 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-205ENST00000469043 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
SCFD1-205ENST00000469043 MARSP56192 900 aaKnown RBP9.09□□□□□ -0.95
SCFD1-205ENST00000469043 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
SCFD1-205ENST00000469043 NLRP3Q96P20 1036 aa9.09□□□□□ -0.95
SCFD1-205ENST00000469043 A0A1W2PRU2 124 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 RHOQP17081 205 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 GSK3AP49840 483 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 SRSF11Q05519 484 aaKnown RBP9.08□□□□□ -0.96
SCFD1-205ENST00000469043 NR1H3Q13133 447 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
SCFD1-205ENST00000469043 ARHGEF15O94989 841 aa9.07□□□□□ -0.96
SCFD1-205ENST00000469043 ADAMTS2O95450 1211 aa9.07□□□□□ -0.96
SCFD1-205ENST00000469043 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
SCFD1-205ENST00000469043 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
SCFD1-205ENST00000469043 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
SCFD1-205ENST00000469043 RIPOR1Q6ZS17 1223 aa9.06□□□□□ -0.96
SCFD1-205ENST00000469043 TRIM22Q8IYM9 498 aa9.06□□□□□ -0.96
SCFD1-205ENST00000469043 ENAMQ9NRM1 1142 aa9.06□□□□□ -0.96
SCFD1-205ENST00000469043 CUEDC1Q9NWM3 386 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-205ENST00000469043 H7C1W4 665 aa9.05□□□□□ -0.96
SCFD1-205ENST00000469043 APBB1O00213 710 aa9.05□□□□□ -0.96
SCFD1-205ENST00000469043 CYP2U1Q7Z449 544 aa9.05□□□□□ -0.96
SCFD1-205ENST00000469043 SCARF2Q96GP6 870 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-205ENST00000469043 DYRK1BQ9Y463 629 aa9.04□□□□□ -0.96
SCFD1-205ENST00000469043 POU4F2Q12837 409 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 KANK3Q6NY19 840 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 LYPD4Q6UWN0 246 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 GAS2L1Q99501 681 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-205ENST00000469043 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 PCDHB11Q9Y5F2 797 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 NDUFB9Q9Y6M9 179 aa9.03□□□□□ -0.96
SCFD1-205ENST00000469043 SOCS7O14512 581 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 IRS1P35568 1242 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 CLN3Q13286 438 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 GAS6Q14393 721 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 DBN1Q16643 649 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 ZNF837Q96EG3 531 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-205ENST00000469043 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
SCFD1-205ENST00000469043 CELA2BP08218 269 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-205ENST00000469043 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
SCFD1-205ENST00000469043 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
SCFD1-205ENST00000469043 SCTRP47872 440 aa9□□□□□ -0.97
SCFD1-205ENST00000469043 NBPF10Q6P3W6 841 aaKnown RBP9□□□□□ -0.97
SCFD1-205ENST00000469043 NBPF15Q8N660 670 aa9□□□□□ -0.97
SCFD1-205ENST00000469043 SPATA31C2B4DYI2 1134 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 GPR25O00155 361 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 TRAK2O60296 914 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 SUZ12Q15022 739 aaKnown RBP8.99□□□□□ -0.97
SCFD1-205ENST00000469043 OSBPL3Q9H4L5 887 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 ARHGEF10LQ9HCE6 1279 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 TIMMDC1Q9NPL8 285 aa8.99□□□□□ -0.97
SCFD1-205ENST00000469043 NSFL1CQ9UNZ2 370 aaKnown RBP8.99□□□□□ -0.97
SCFD1-205ENST00000469043 MYCP01106 439 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-205ENST00000469043 GNRH1P01148 92 aa8.98□□□□□ -0.97
SCFD1-205ENST00000469043 BRPF1P55201 1214 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-205ENST00000469043 TAS1R3Q7RTX0 852 aa8.98□□□□□ -0.97
SCFD1-205ENST00000469043 GTPBP3Q969Y2 492 aaKnown RBP8.98□□□□□ -0.97
SCFD1-205ENST00000469043 DNMT3AQ9Y6K1 912 aaPredicted RBP8.98□□□□□ -0.97
SCFD1-205ENST00000469043 IGF1RP08069 1367 aa8.98□□□□□ -0.97
SCFD1-205ENST00000469043 WASLO00401 505 aaPredicted RBP8.97□□□□□ -0.97
SCFD1-205ENST00000469043 F11P03951 625 aa8.97□□□□□ -0.97
SCFD1-205ENST00000469043 MTMR14Q8NCE2 650 aa8.97□□□□□ -0.97
SCFD1-205ENST00000469043 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
SCFD1-205ENST00000469043 IGHA1P01876 353 aa8.96□□□□□ -0.98
SCFD1-205ENST00000469043 GTF2E1P29083 439 aaPredicted RBP8.96□□□□□ -0.98
SCFD1-205ENST00000469043 FOXK2Q01167 660 aa8.96□□□□□ -0.98
SCFD1-205ENST00000469043 CNKSR1Q969H4 720 aa8.96□□□□□ -0.98
SCFD1-205ENST00000469043 SNRKQ9NRH2 765 aa8.96□□□□□ -0.98
SCFD1-205ENST00000469043 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
SCFD1-205ENST00000469043 PHF20L1A8MW92 1017 aa8.95□□□□□ -0.98
SCFD1-205ENST00000469043 BCRP11274 1271 aa8.95□□□□□ -0.98
SCFD1-205ENST00000469043 MX2P20592 715 aa8.95□□□□□ -0.98
SCFD1-205ENST00000469043 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
SCFD1-205ENST00000469043 ESYT1Q9BSJ8 1104 aa8.95□□□□□ -0.98
SCFD1-205ENST00000469043 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
SCFD1-205ENST00000469043 CENPCQ03188 943 aa8.94□□□□□ -0.98
SCFD1-205ENST00000469043 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
SCFD1-205ENST00000469043 BEND7Q8N7W2 519 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-205ENST00000469043 RAB6BQ9NRW1 208 aa8.94□□□□□ -0.98
SCFD1-205ENST00000469043 TPRNQ4KMQ1 711 aa8.93□□□□□ -0.98
SCFD1-205ENST00000469043 PODNQ7Z5L7 613 aa8.93□□□□□ -0.98
SCFD1-205ENST00000469043 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-205ENST00000469043 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCFD1-205ENST00000469043 ESCO1Q5FWF5 840 aa8.92□□□□□ -0.98
SCFD1-205ENST00000469043 CFHR5Q9BXR6 569 aa8.92□□□□□ -0.98
SCFD1-205ENST00000469043 LRRC4BQ9NT99 713 aa8.92□□□□□ -0.98
SCFD1-205ENST00000469043 GPR37L1O60883 481 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms