RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TESK2Q96S53 571 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 STARD3NLO95772 234 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 FANCIQ9NVI1 1328 aa7.69□□□□□ -1.18
SHQ1-205ENST00000468371 RTCBQ9Y3I0 505 aaKnown RBP7.68□□□□□ -1.18
SHQ1-205ENST00000468371 NGEFQ8N5V2 710 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 NBPF6Q5VWK0 638 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 NBPF4Q96M43 638 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 CHMP4AQ9BY43 222 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 SBNO2Q9Y2G9 1366 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 OVOS2A0A0G2JMS6 1433 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 OVOS2A0A0J9YW53 1432 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 OVOS2Q6IE36 1432 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
SHQ1-205ENST00000468371 KIF7Q2M1P5 1343 aa7.67□□□□□ -1.18
SHQ1-205ENST00000468371 GNPATO15228 680 aa7.67□□□□□ -1.18
SHQ1-205ENST00000468371 AHDC1Q5TGY3 1603 aaPredicted RBP7.67□□□□□ -1.18
SHQ1-205ENST00000468371 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
SHQ1-205ENST00000468371 BICDL1Q6ZP65 573 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 MARCH10Q8NA82 808 aaPredicted RBP7.66□□□□□ -1.18
SHQ1-205ENST00000468371 EYA1Q99502 592 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 PARP3Q9Y6F1 533 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 PPLO60437 1756 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 CPDO75976 1380 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 USP19O94966 1318 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 KCNQ2O43526 872 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 RALBP1Q15311 655 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 IPO9Q96P70 1041 aaKnown RBP7.66□□□□□ -1.18
SHQ1-205ENST00000468371 LRP6O75581 1613 aa7.66□□□□□ -1.18
SHQ1-205ENST00000468371 G3V3G9 751 aa7.65□□□□□ -1.18
SHQ1-205ENST00000468371 CALD1Q05682 793 aaKnown RBP7.65□□□□□ -1.18
SHQ1-205ENST00000468371 DCAF8Q5TAQ9 597 aa7.65□□□□□ -1.18
SHQ1-205ENST00000468371 MSL1Q68DK7 614 aa7.65□□□□□ -1.18
SHQ1-205ENST00000468371 DCAF5Q96JK2 942 aa7.65□□□□□ -1.18
SHQ1-205ENST00000468371 POLKQ9UBT6 870 aa7.65□□□□□ -1.18
SHQ1-205ENST00000468371 PRKAR2BP31323 418 aa7.65□□□□□ -1.19
SHQ1-205ENST00000468371 EIF4A2Q14240 407 aaKnown RBP7.65□□□□□ -1.19
SHQ1-205ENST00000468371 SLC27A3Q5K4L6 730 aa7.65□□□□□ -1.19
SHQ1-205ENST00000468371 ATRNO75882 1429 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 CPSF1Q10570 1443 aaKnown RBP7.64□□□□□ -1.19
SHQ1-205ENST00000468371 RGS3P49796 1198 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 RGS12O14924 1447 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 FAM177BA6PVY3 158 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 PXDNQ92626 1479 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 KIF1AQ12756 1690 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 KCNQ4P56696 695 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 ANO8Q9HCE9 1232 aaPredicted RBP7.64□□□□□ -1.19
SHQ1-205ENST00000468371 RRP7AQ9Y3A4 280 aaKnown RBP7.64□□□□□ -1.19
SHQ1-205ENST00000468371 NSD2O96028 1365 aa7.64□□□□□ -1.19
SHQ1-205ENST00000468371 GNAT3A8MTJ3 354 aa7.63□□□□□ -1.19
SHQ1-205ENST00000468371 EIF2S2P20042 333 aaKnown RBP7.63□□□□□ -1.19
SHQ1-205ENST00000468371 SLC15A2Q16348 729 aa7.63□□□□□ -1.19
SHQ1-205ENST00000468371 C16orf71Q8IYS4 520 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-205ENST00000468371 TEX13AQ9BXU3 409 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-205ENST00000468371 BCL9LQ86UU0 1499 aa7.63□□□□□ -1.19
SHQ1-205ENST00000468371 ERICH6BQ5W0A0 696 aa7.63□□□□□ -1.19
SHQ1-205ENST00000468371 XRN1Q8IZH2 1706 aaKnown RBP7.63□□□□□ -1.19
SHQ1-205ENST00000468371 CARD14Q9BXL6 1004 aa7.63□□□□□ -1.19
SHQ1-205ENST00000468371 BTBD11A6QL63 1104 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 CCDC184Q52MB2 194 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 NFATC2IPQ8NCF5 419 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 ZNF652Q9Y2D9 606 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 PLSCR1O15162 318 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 ONECUT3O60422 494 aaPredicted RBP7.62□□□□□ -1.19
SHQ1-205ENST00000468371 INSRP06213 1382 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 A0A087WZG4 1122 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 SLC16A10Q8TF71 515 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 PRKRIP1Q9H875 184 aaPredicted RBP7.62□□□□□ -1.19
SHQ1-205ENST00000468371 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 SLC4A3P48751 1232 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 SIK1P57059 783 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 KIF6Q6ZMV9 814 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 MTFR1LQ9H019 292 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 CCDC87Q9NVE4 849 aa7.62□□□□□ -1.19
SHQ1-205ENST00000468371 STRCP1A6NGW2 1772 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 NLGN1Q8N2Q7 840 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 PNISRQ8TF01 805 aaKnown RBP7.61□□□□□ -1.19
SHQ1-205ENST00000468371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.61□□□□□ -1.19
SHQ1-205ENST00000468371 PARD3Q8TEW0 1356 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 DDRGK1Q96HY6 314 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 TSPYL4Q9UJ04 414 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 COL16A1Q07092 1604 aaPredicted RBP7.61□□□□□ -1.19
SHQ1-205ENST00000468371 ADGRB1O14514 1584 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 YY1P25490 414 aa7.61□□□□□ -1.19
SHQ1-205ENST00000468371 RTL1A6NKG5 1358 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 CDK12Q9NYV4 1490 aaPredicted RBP7.6□□□□□ -1.19
SHQ1-205ENST00000468371 ERVV-2B6SEH9 535 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 RIPK4P57078 832 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 ZNF622Q969S3 477 aaKnown RBP eCLIP7.6□□□□□ -1.19
SHQ1-205ENST00000468371 STK31Q9BXU1 1019 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.6□□□□□ -1.19
SHQ1-205ENST00000468371 AEBP1Q8IUX7 1158 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 SLIT2O94813 1529 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 GRIN3BO60391 1043 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 IL27Q8NEV9 243 aa7.6□□□□□ -1.19
SHQ1-205ENST00000468371 ZNF219Q9P2Y4 722 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 227.5 ms