RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
SMC4-207ENST00000467263 SVOPQ8N4V2 548 aa9.64□□□□□ -0.87
SMC4-207ENST00000467263 ARHGEF15O94989 841 aa9.63□□□□□ -0.87
SMC4-207ENST00000467263 SCTRP47872 440 aa9.63□□□□□ -0.87
SMC4-207ENST00000467263 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
SMC4-207ENST00000467263 RNF144AP50876 292 aaPredicted RBP9.62□□□□□ -0.87
SMC4-207ENST00000467263 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
SMC4-207ENST00000467263 RASSF7Q02833 373 aa9.62□□□□□ -0.87
SMC4-207ENST00000467263 A0A1W2PRU2 124 aa9.61□□□□□ -0.87
SMC4-207ENST00000467263 ATP5J2-PTCD1G3V325 749 aa9.61□□□□□ -0.87
SMC4-207ENST00000467263 MEN1O00255 615 aa9.61□□□□□ -0.87
SMC4-207ENST00000467263 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
SMC4-207ENST00000467263 ADAMTS2O95450 1211 aa9.6□□□□□ -0.87
SMC4-207ENST00000467263 GPR25O00155 361 aa9.59□□□□□ -0.87
SMC4-207ENST00000467263 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
SMC4-207ENST00000467263 ZNF837Q96EG3 531 aaPredicted RBP9.59□□□□□ -0.87
SMC4-207ENST00000467263 GDF11O95390 407 aa9.58□□□□□ -0.88
SMC4-207ENST00000467263 DBN1Q16643 649 aa9.58□□□□□ -0.88
SMC4-207ENST00000467263 TMEM151AQ8N4L1 468 aa9.58□□□□□ -0.88
SMC4-207ENST00000467263 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
SMC4-207ENST00000467263 POU4F2Q12837 409 aa9.57□□□□□ -0.88
SMC4-207ENST00000467263 SNRKQ9NRH2 765 aa9.57□□□□□ -0.88
SMC4-207ENST00000467263 LOC100996750A0A140TA64 210 aa9.56□□□□□ -0.88
SMC4-207ENST00000467263 NR1H3Q13133 447 aa9.56□□□□□ -0.88
SMC4-207ENST00000467263 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
SMC4-207ENST00000467263 KRTAP4-6Q9BYQ5 205 aa9.56□□□□□ -0.88
SMC4-207ENST00000467263 OSBPL3Q9H4L5 887 aa9.56□□□□□ -0.88
SMC4-207ENST00000467263 IRS1P35568 1242 aa9.55□□□□□ -0.88
SMC4-207ENST00000467263 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
SMC4-207ENST00000467263 CELA2BP08218 269 aaPredicted RBP9.54□□□□□ -0.88
SMC4-207ENST00000467263 RIPOR1Q6ZS17 1223 aa9.54□□□□□ -0.88
SMC4-207ENST00000467263 GRIP2Q9C0E4 1043 aa9.54□□□□□ -0.88
SMC4-207ENST00000467263 RAB6BQ9NRW1 208 aa9.54□□□□□ -0.88
SMC4-207ENST00000467263 TRAK2O60296 914 aa9.53□□□□□ -0.88
SMC4-207ENST00000467263 GPC1P35052 558 aa9.53□□□□□ -0.88
SMC4-207ENST00000467263 SRSF11Q05519 484 aaKnown RBP9.53□□□□□ -0.88
SMC4-207ENST00000467263 SUZ12Q15022 739 aaKnown RBP9.53□□□□□ -0.88
SMC4-207ENST00000467263 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
SMC4-207ENST00000467263 ARHGEF10LQ9HCE6 1279 aa9.53□□□□□ -0.88
SMC4-207ENST00000467263 GTPBP3Q969Y2 492 aaKnown RBP9.52□□□□□ -0.89
SMC4-207ENST00000467263 GAS2L1Q99501 681 aaPredicted RBP9.52□□□□□ -0.89
SMC4-207ENST00000467263 CDCA7Q9BWT1 371 aaPredicted RBP9.52□□□□□ -0.89
SMC4-207ENST00000467263 CLN3Q13286 438 aa9.51□□□□□ -0.89
SMC4-207ENST00000467263 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
SMC4-207ENST00000467263 NBPF10Q6P3W6 841 aaKnown RBP9.51□□□□□ -0.89
SMC4-207ENST00000467263 NBPF15Q8N660 670 aa9.51□□□□□ -0.89
SMC4-207ENST00000467263 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
SMC4-207ENST00000467263 THBS1P07996 1170 aa9.5□□□□□ -0.89
SMC4-207ENST00000467263 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
SMC4-207ENST00000467263 DYRK1BQ9Y463 629 aa9.5□□□□□ -0.89
SMC4-207ENST00000467263 RNF225M0QZC1 329 aaPredicted RBP9.49□□□□□ -0.89
SMC4-207ENST00000467263 MARSP56192 900 aaKnown RBP9.49□□□□□ -0.89
SMC4-207ENST00000467263 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
SMC4-207ENST00000467263 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
SMC4-207ENST00000467263 CYP2U1Q7Z449 544 aa9.49□□□□□ -0.89
SMC4-207ENST00000467263 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
SMC4-207ENST00000467263 IGF1RP08069 1367 aa9.49□□□□□ -0.89
SMC4-207ENST00000467263 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
SMC4-207ENST00000467263 IL2RAP01589 272 aa9.48□□□□□ -0.89
SMC4-207ENST00000467263 MBIPQ9NS73 344 aa9.48□□□□□ -0.89
SMC4-207ENST00000467263 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
SMC4-207ENST00000467263 SPATA31C2B4DYI2 1134 aa9.47□□□□□ -0.89
SMC4-207ENST00000467263 ACDQ96AP0 544 aa9.46□□□□□ -0.9
SMC4-207ENST00000467263 CEP126Q9P2H0 1117 aa9.46□□□□□ -0.9
SMC4-207ENST00000467263 CNTNAP5Q8WYK1 1306 aa9.46□□□□□ -0.9
SMC4-207ENST00000467263 PHKA2P46019 1235 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 MAP3K10Q02779 954 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 CCDC125Q86Z20 511 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 GMCL1Q96IK5 515 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 TBC1D2BQ9UPU7 963 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
SMC4-207ENST00000467263 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
SMC4-207ENST00000467263 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
SMC4-207ENST00000467263 CENPCQ03188 943 aa9.44□□□□□ -0.9
SMC4-207ENST00000467263 SOCS7O14512 581 aa9.43□□□□□ -0.9
SMC4-207ENST00000467263 TAS1R3Q7RTX0 852 aa9.43□□□□□ -0.9
SMC4-207ENST00000467263 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
SMC4-207ENST00000467263 GPAMQ9HCL2 828 aa9.43□□□□□ -0.9
SMC4-207ENST00000467263 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
SMC4-207ENST00000467263 IRF5Q13568 498 aa9.42□□□□□ -0.9
SMC4-207ENST00000467263 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
SMC4-207ENST00000467263 NUCKS1Q9H1E3 243 aaKnown RBP9.42□□□□□ -0.9
SMC4-207ENST00000467263 H7C1W4 665 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 GNRH1P01148 92 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 F11P03951 625 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 ITGB2P05107 769 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 BCRP11274 1271 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 TRIM52Q96A61 297 aa9.41□□□□□ -0.9
SMC4-207ENST00000467263 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
SMC4-207ENST00000467263 ZNF330Q9Y3S2 320 aaPredicted RBP9.41□□□□□ -0.9
SMC4-207ENST00000467263 MX2P20592 715 aa9.4□□□□□ -0.9
SMC4-207ENST00000467263 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
SMC4-207ENST00000467263 KANK3Q6NY19 840 aa9.4□□□□□ -0.9
SMC4-207ENST00000467263 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
SMC4-207ENST00000467263 XAGE2Q96GT9 111 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms