RNA–Protein interactions for RNA: ENST00000465768.1

SAMM50-202, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 169 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-202ENST00000465768 ARHGAP9Q9BRR9 750 aa7.27□□□□□ -1.25
SAMM50-202ENST00000465768 SPINT1O43278 529 aa7.26□□□□□ -1.25
SAMM50-202ENST00000465768 MCCD1P59942 119 aaPredicted RBP7.26□□□□□ -1.25
SAMM50-202ENST00000465768 PTSQ03393 145 aa7.26□□□□□ -1.25
SAMM50-202ENST00000465768 NANOS1Q8WY41 292 aaKnown RBP7.26□□□□□ -1.25
SAMM50-202ENST00000465768 PPP1R12CQ9BZL4 782 aa7.26□□□□□ -1.25
SAMM50-202ENST00000465768 CFAP70Q5T0N1 1121 aa7.25□□□□□ -1.25
SAMM50-202ENST00000465768 ADAM32Q8TC27 787 aa7.25□□□□□ -1.25
SAMM50-202ENST00000465768 KRT76Q01546 638 aa7.24□□□□□ -1.25
SAMM50-202ENST00000465768 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
SAMM50-202ENST00000465768 KCTD15Q96SI1 283 aaPredicted RBP7.24□□□□□ -1.25
SAMM50-202ENST00000465768 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
SAMM50-202ENST00000465768 CBLBQ13191 982 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 ZBTB33Q86T24 672 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 CCDC155Q8N6L0 562 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 CNTNAP3BQ96NU0 1288 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 CNTNAP3Q9BZ76 1288 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 PCDHB9Q9Y5E1 797 aa7.23□□□□□ -1.25
SAMM50-202ENST00000465768 ATP9BO43861 1147 aa7.22□□□□□ -1.25
SAMM50-202ENST00000465768 PPP1R15AO75807 674 aaPredicted RBP7.22□□□□□ -1.25
SAMM50-202ENST00000465768 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
SAMM50-202ENST00000465768 MAFBQ9Y5Q3 323 aaPredicted RBP7.22□□□□□ -1.25
SAMM50-202ENST00000465768 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 SLC35F4A4IF30 521 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 GSK3AP49840 483 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
SAMM50-202ENST00000465768 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 GPR161Q8N6U8 529 aaKnown RBP7.21□□□□□ -1.26
SAMM50-202ENST00000465768 PBXIP1Q96AQ6 731 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
SAMM50-202ENST00000465768 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 CEP126Q9P2H0 1117 aa7.21□□□□□ -1.26
SAMM50-202ENST00000465768 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
SAMM50-202ENST00000465768 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
SAMM50-202ENST00000465768 PIK3CDO00329 1044 aa7.2□□□□□ -1.26
SAMM50-202ENST00000465768 ITGA6P23229 1130 aa7.2□□□□□ -1.26
SAMM50-202ENST00000465768 SRPK2P78362 688 aaKnown RBP7.2□□□□□ -1.26
SAMM50-202ENST00000465768 DZIP3Q86Y13 1208 aaKnown RBP7.2□□□□□ -1.26
SAMM50-202ENST00000465768 TMEM151AQ8N4L1 468 aa7.2□□□□□ -1.26
SAMM50-202ENST00000465768 PHTF2Q8N3S3 785 aa7.19□□□□□ -1.26
SAMM50-202ENST00000465768 SVOPQ8N4V2 548 aa7.19□□□□□ -1.26
SAMM50-202ENST00000465768 CHIC2Q9UKJ5 165 aa7.19□□□□□ -1.26
SAMM50-202ENST00000465768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.18□□□□□ -1.26
SAMM50-202ENST00000465768 GDF11O95390 407 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 SLURP2P0DP57 97 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 LMOD1P29536 600 aaPredicted RBP7.18□□□□□ -1.26
SAMM50-202ENST00000465768 RASSF7Q02833 373 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 SLFNL1Q499Z3 407 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 ZNF385CQ66K41 422 aaPredicted RBP7.18□□□□□ -1.26
SAMM50-202ENST00000465768 SV2AQ7L0J3 742 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 RNF135Q8IUD6 432 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 PLEKHM2Q8IWE5 1019 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 KCTD17Q8N5Z5 321 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 TRIM52Q96A61 297 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 POLMQ9NP87 494 aaPredicted RBP7.18□□□□□ -1.26
SAMM50-202ENST00000465768 ADAMTS8Q9UP79 889 aa7.18□□□□□ -1.26
SAMM50-202ENST00000465768 CDC14CA4D256 554 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 USP17L5A8MUK1 530 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 SKIP12755 728 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 RFX1P22670 979 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 CTSOP43234 321 aaPredicted RBP7.17□□□□□ -1.26
SAMM50-202ENST00000465768 RELBQ01201 579 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 RNFT1Q5M7Z0 435 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 RNF217Q8TC41 542 aa7.17□□□□□ -1.26
SAMM50-202ENST00000465768 USP17L3A6NCW0 530 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 USP17L4A6NCW7 530 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 ESPNB1AK53 854 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 ADH1AP07327 375 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 SUZ12Q15022 739 aaKnown RBP7.16□□□□□ -1.26
SAMM50-202ENST00000465768 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 USP17L1Q7RTZ2 530 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 PLPP7Q8NBV4 271 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 AGBL1Q96MI9 1066 aa7.16□□□□□ -1.26
SAMM50-202ENST00000465768 INSM2Q96T92 566 aaPredicted RBP7.16□□□□□ -1.26
SAMM50-202ENST00000465768 LZTS3O60299 673 aaPredicted RBP7.15□□□□□ -1.26
SAMM50-202ENST00000465768 MAP7D1Q3KQU3 841 aa7.15□□□□□ -1.26
SAMM50-202ENST00000465768 SEPT12Q8IYM1 358 aa7.15□□□□□ -1.26
SAMM50-202ENST00000465768 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.26
SAMM50-202ENST00000465768 GIGYF1O75420 1035 aaPredicted RBP7.14□□□□□ -1.27
SAMM50-202ENST00000465768 KANK4Q5T7N3 995 aaPredicted RBP7.14□□□□□ -1.27
SAMM50-202ENST00000465768 RNF20Q5VTR2 975 aa7.14□□□□□ -1.27
SAMM50-202ENST00000465768 CCDC125Q86Z20 511 aa7.14□□□□□ -1.27
SAMM50-202ENST00000465768 VWA5B2Q8N398 1253 aa7.14□□□□□ -1.27
SAMM50-202ENST00000465768 RETREG2Q8NC44 543 aa7.14□□□□□ -1.27
SAMM50-202ENST00000465768 DNMT3AQ9Y6K1 912 aaPredicted RBP7.14□□□□□ -1.27
SAMM50-202ENST00000465768 SENP3-EIF4A1A0A087X0R7 540 aa7.13□□□□□ -1.27
SAMM50-202ENST00000465768 ATG7O95352 703 aa7.13□□□□□ -1.27
SAMM50-202ENST00000465768 NCOA4Q13772 614 aa7.13□□□□□ -1.27
SAMM50-202ENST00000465768 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
SAMM50-202ENST00000465768 KANK3Q6NY19 840 aa7.13□□□□□ -1.27
SAMM50-202ENST00000465768 CCDC85AQ96PX6 553 aaPredicted RBP7.13□□□□□ -1.27
SAMM50-202ENST00000465768 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
SAMM50-202ENST00000465768 ARHGEF15O94989 841 aa7.12□□□□□ -1.27
SAMM50-202ENST00000465768 EML3Q32P44 896 aa7.12□□□□□ -1.27
SAMM50-202ENST00000465768 SCARF2Q96GP6 870 aaPredicted RBP7.12□□□□□ -1.27
SAMM50-202ENST00000465768 ZNF395Q9H8N7 513 aaPredicted RBP7.12□□□□□ -1.27
SAMM50-202ENST00000465768 VRTNQ9H8Y1 702 aa7.12□□□□□ -1.27
SAMM50-202ENST00000465768 DOLKQ9UPQ8 538 aa7.12□□□□□ -1.27
SAMM50-202ENST00000465768 USTQ9Y2C2 406 aa7.12□□□□□ -1.27
SAMM50-202ENST00000465768 LILRA1O75019 489 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms