RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
SF1-212ENST00000463343 STK32BQ9NY57 414 aa24.14■■□□□ 1.45
SF1-212ENST00000463343 KIF24Q5T7B8 1368 aa24.14■■□□□ 1.45
SF1-212ENST00000463343 ANKRD26Q9UPS8 1709 aa24.13■■□□□ 1.45
SF1-212ENST00000463343 SLC15A2Q16348 729 aa24.13■■□□□ 1.45
SF1-212ENST00000463343 NPC1L1Q9UHC9 1359 aa24.13■■□□□ 1.45
SF1-212ENST00000463343 FLT4P35916 1363 aa24.12■■□□□ 1.45
SF1-212ENST00000463343 PTGER2P43116 358 aa24.11■■□□□ 1.45
SF1-212ENST00000463343 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
SF1-212ENST00000463343 INSRP06213 1382 aa24.11■■□□□ 1.45
SF1-212ENST00000463343 IL2RBP14784 551 aa24.1■■□□□ 1.45
SF1-212ENST00000463343 PDGFDQ9GZP0 370 aaPredicted RBP24.1■■□□□ 1.45
SF1-212ENST00000463343 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
SF1-212ENST00000463343 DDX10Q13206 875 aaKnown RBP24.09■■□□□ 1.45
SF1-212ENST00000463343 NHSQ6T4R5 1651 aa24.08■■□□□ 1.44
SF1-212ENST00000463343 ZBTB7AO95365 584 aa24.07■■□□□ 1.44
SF1-212ENST00000463343 NBPF6Q5VWK0 638 aa24.07■■□□□ 1.44
SF1-212ENST00000463343 NBPF4Q96M43 638 aa24.07■■□□□ 1.44
SF1-212ENST00000463343 MTFR1LQ9H019 292 aa24.07■■□□□ 1.44
SF1-212ENST00000463343 SGIP1Q9BQI5 828 aa24.04■■□□□ 1.44
SF1-212ENST00000463343 ATF5Q9Y2D1 282 aaPredicted RBP24.03■■□□□ 1.44
SF1-212ENST00000463343 MTHFSP49914 203 aa24.02■■□□□ 1.44
SF1-212ENST00000463343 KAT6BQ8WYB5 2073 aa24.02■■□□□ 1.44
SF1-212ENST00000463343 SMG6Q86US8 1419 aaKnown RBP24.01■■□□□ 1.43
SF1-212ENST00000463343 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
SF1-212ENST00000463343 EIF4A2Q14240 407 aaKnown RBP24.01■■□□□ 1.43
SF1-212ENST00000463343 USHBP1Q8N6Y0 703 aa24.01■■□□□ 1.43
SF1-212ENST00000463343 ACSBG1Q96GR2 724 aa24.01■■□□□ 1.43
SF1-212ENST00000463343 SYT17Q9BSW7 474 aa24■■□□□ 1.43
SF1-212ENST00000463343 EYA1Q99502 592 aa23.99■■□□□ 1.43
SF1-212ENST00000463343 PAPPAQ13219 1627 aa23.98■■□□□ 1.43
SF1-212ENST00000463343 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
SF1-212ENST00000463343 BTAF1O14981 1849 aa23.98■■□□□ 1.43
SF1-212ENST00000463343 SLC27A3Q5K4L6 730 aa23.97■■□□□ 1.43
SF1-212ENST00000463343 FHDC1Q9C0D6 1143 aaPredicted RBP23.97■■□□□ 1.43
SF1-212ENST00000463343 FAM208AQ9UK61 1670 aaKnown RBP23.96■■□□□ 1.43
SF1-212ENST00000463343 MAP3K5Q99683 1374 aa23.96■■□□□ 1.43
SF1-212ENST00000463343 SLC16A10Q8TF71 515 aa23.96■■□□□ 1.43
SF1-212ENST00000463343 LRRC4BQ9NT99 713 aa23.95■■□□□ 1.42
SF1-212ENST00000463343 IL13P35225 146 aa23.94■■□□□ 1.42
SF1-212ENST00000463343 ARXQ96QS3 562 aa23.94■■□□□ 1.42
SF1-212ENST00000463343 PPP2R1AP30153 589 aa23.93■■□□□ 1.42
SF1-212ENST00000463343 AKT1S1Q96B36 256 aa23.93■■□□□ 1.42
SF1-212ENST00000463343 RAPGEF4Q8WZA2 1011 aa23.92■■□□□ 1.42
SF1-212ENST00000463343 DDX54Q8TDD1 881 aaKnown RBP23.91■■□□□ 1.42
SF1-212ENST00000463343 NCAPD2Q15021 1401 aa23.91■■□□□ 1.42
SF1-212ENST00000463343 TATP17735 454 aaPredicted RBP23.9■■□□□ 1.42
SF1-212ENST00000463343 ZNF827Q17R98 1081 aa23.9■■□□□ 1.42
SF1-212ENST00000463343 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
SF1-212ENST00000463343 MEGF6O75095 1541 aa23.89■■□□□ 1.42
SF1-212ENST00000463343 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.42
SF1-212ENST00000463343 QSER1Q2KHR3 1735 aa23.89■■□□□ 1.41
SF1-212ENST00000463343 UTRNP46939 3433 aa23.88■■□□□ 1.41
SF1-212ENST00000463343 CHD4Q14839 1912 aa23.88■■□□□ 1.41
SF1-212ENST00000463343 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
SF1-212ENST00000463343 ZNF784Q8NCA9 323 aaPredicted RBP23.86■■□□□ 1.41
SF1-212ENST00000463343 COL24A1Q17RW2 1714 aa23.85■■□□□ 1.41
SF1-212ENST00000463343 PRIM1P49642 420 aaKnown RBP23.85■■□□□ 1.41
SF1-212ENST00000463343 RALBP1Q15311 655 aa23.85■■□□□ 1.41
SF1-212ENST00000463343 AEBP1Q8IUX7 1158 aa23.85■■□□□ 1.41
SF1-212ENST00000463343 HMGB2P26583 209 aaKnown RBP23.84■■□□□ 1.41
SF1-212ENST00000463343 SULT6B1Q6IMI4 303 aa23.83■■□□□ 1.41
SF1-212ENST00000463343 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.4
SF1-212ENST00000463343 COL3A1P02461 1466 aaPredicted RBP23.82■■□□□ 1.4
SF1-212ENST00000463343 POLD1P28340 1107 aa23.82■■□□□ 1.4
SF1-212ENST00000463343 CFAP53Q96M91 514 aa23.82■■□□□ 1.4
SF1-212ENST00000463343 TFCP2L1Q9NZI6 479 aa23.81■■□□□ 1.4
SF1-212ENST00000463343 LY75O60449 1722 aa23.81■■□□□ 1.4
SF1-212ENST00000463343 SYTL4Q96C24 671 aaPredicted RBP23.8■■□□□ 1.4
SF1-212ENST00000463343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.8■■□□□ 1.4
SF1-212ENST00000463343 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
SF1-212ENST00000463343 CYP27B1O15528 508 aa23.78■■□□□ 1.4
SF1-212ENST00000463343 HMOX1P09601 288 aa23.78■■□□□ 1.4
SF1-212ENST00000463343 SHANK3Q9BYB0 1731 aa23.78■■□□□ 1.4
SF1-212ENST00000463343 KDRP35968 1356 aa23.78■■□□□ 1.4
SF1-212ENST00000463343 U2SURPO15042 1029 aaKnown RBP23.77■■□□□ 1.4
SF1-212ENST00000463343 DOT1LQ8TEK3 1739 aa23.76■■□□□ 1.39
SF1-212ENST00000463343 PRKRIP1Q9H875 184 aaPredicted RBP23.76■■□□□ 1.39
SF1-212ENST00000463343 PCDH11XQ9BZA7 1347 aa23.76■■□□□ 1.39
SF1-212ENST00000463343 PCDH11YQ9BZA8 1340 aa23.76■■□□□ 1.39
SF1-212ENST00000463343 GPR162Q16538 588 aa23.75■■□□□ 1.39
SF1-212ENST00000463343 PLEKHO1Q53GL0 409 aaPredicted RBP23.75■■□□□ 1.39
SF1-212ENST00000463343 CCNL1Q9UK58 526 aaPredicted RBP23.75■■□□□ 1.39
SF1-212ENST00000463343 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
SF1-212ENST00000463343 KCNQ4P56696 695 aa23.73■■□□□ 1.39
SF1-212ENST00000463343 MYBBP1AQ9BQG0 1328 aaKnown RBP23.73■■□□□ 1.39
SF1-212ENST00000463343 PLEKHG2Q9H7P9 1386 aa23.73■■□□□ 1.39
SF1-212ENST00000463343 TUBGCP6Q96RT7 1819 aa23.73■■□□□ 1.39
SF1-212ENST00000463343 NKX1-1Q15270 411 aaPredicted RBP23.72■■□□□ 1.39
SF1-212ENST00000463343 AMOTQ4VCS5 1084 aa23.72■■□□□ 1.39
SF1-212ENST00000463343 PHKG2P15735 406 aa23.71■■□□□ 1.39
SF1-212ENST00000463343 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
SF1-212ENST00000463343 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.39
SF1-212ENST00000463343 FLAD1Q8NFF5 587 aa23.7■■□□□ 1.38
SF1-212ENST00000463343 U2AF1L5P0DN76 240 aaPredicted RBP23.69■■□□□ 1.38
SF1-212ENST00000463343 U2AF1Q01081 240 aaKnown RBP eCLIP23.69■■□□□ 1.383e-7■■■□□ 15.3
SF1-212ENST00000463343 COL23A1Q86Y22 540 aaPredicted RBP23.69■■□□□ 1.38
SF1-212ENST00000463343 ZNF530Q6P9A1 599 aaPredicted RBP23.68■■□□□ 1.38
SF1-212ENST00000463343 RSPH6AQ9H0K4 717 aa23.67■■□□□ 1.38
SF1-212ENST00000463343 GRIN3BO60391 1043 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms