RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
THUMPD3-207ENST00000461636 GJD4Q96KN9 370 aaPredicted RBP9.92□□□□□ -0.82
THUMPD3-207ENST00000461636 CYLDQ9NQC7 956 aa9.92□□□□□ -0.82
THUMPD3-207ENST00000461636 APBB1O00213 710 aa9.91□□□□□ -0.82
THUMPD3-207ENST00000461636 FBXO45P0C2W1 286 aa9.91□□□□□ -0.82
THUMPD3-207ENST00000461636 ADD1P35611 737 aaKnown RBP9.91□□□□□ -0.82
THUMPD3-207ENST00000461636 CNTNAP3BQ96NU0 1288 aa9.91□□□□□ -0.82
THUMPD3-207ENST00000461636 CNTNAP3Q9BZ76 1288 aa9.91□□□□□ -0.82
THUMPD3-207ENST00000461636 CDC14CA4D256 554 aa9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 MCCD1P59942 119 aaPredicted RBP9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 GPR161Q8N6U8 529 aaKnown RBP9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 ZNF330Q9Y3S2 320 aaPredicted RBP9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 TOP2AP11388 1531 aaKnown RBP9.9□□□□□ -0.82
THUMPD3-207ENST00000461636 SOCS7O14512 581 aa9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 SV2AQ7L0J3 742 aa9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 LYSMD3Q7Z3D4 306 aa9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
THUMPD3-207ENST00000461636 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
THUMPD3-207ENST00000461636 GIGYF1O75420 1035 aaPredicted RBP9.88□□□□□ -0.83
THUMPD3-207ENST00000461636 KRT76Q01546 638 aa9.88□□□□□ -0.83
THUMPD3-207ENST00000461636 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
THUMPD3-207ENST00000461636 NR1H3Q13133 447 aa9.87□□□□□ -0.83
THUMPD3-207ENST00000461636 VWA5B2Q8N398 1253 aa9.87□□□□□ -0.83
THUMPD3-207ENST00000461636 KDF1Q8NAX2 398 aaPredicted RBP9.87□□□□□ -0.83
THUMPD3-207ENST00000461636 ARXQ96QS3 562 aa9.87□□□□□ -0.83
THUMPD3-207ENST00000461636 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
THUMPD3-207ENST00000461636 SENP3-EIF4A1A0A087X0R7 540 aa9.85□□□□□ -0.83
THUMPD3-207ENST00000461636 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
THUMPD3-207ENST00000461636 CC2D2BQ6DHV5 1058 aa9.85□□□□□ -0.83
THUMPD3-207ENST00000461636 GPC1P35052 558 aa9.84□□□□□ -0.83
THUMPD3-207ENST00000461636 RNF225M0QZC1 329 aaPredicted RBP9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 MEN1O00255 615 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 RNFT1Q5M7Z0 435 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 CYP2U1Q7Z449 544 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 SVOPQ8N4V2 548 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 MTMR14Q8NCE2 650 aa9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 ESF1Q9H501 851 aaKnown RBP9.83□□□□□ -0.84
THUMPD3-207ENST00000461636 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
THUMPD3-207ENST00000461636 PRICKLE2Q7Z3G6 844 aa9.82□□□□□ -0.84
THUMPD3-207ENST00000461636 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
THUMPD3-207ENST00000461636 PCDHB11Q9Y5F2 797 aa9.81□□□□□ -0.84
THUMPD3-207ENST00000461636 GMCL1Q96IK5 515 aa9.8□□□□□ -0.84
THUMPD3-207ENST00000461636 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 SLURP2P0DP57 97 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 RHOQP17081 205 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 KCNMA1Q12791 1236 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 LAMC3Q9Y6N6 1575 aa9.79□□□□□ -0.84
THUMPD3-207ENST00000461636 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
THUMPD3-207ENST00000461636 NESP48681 1621 aa9.78□□□□□ -0.84
THUMPD3-207ENST00000461636 GPR37L1O60883 481 aa9.77□□□□□ -0.85
THUMPD3-207ENST00000461636 CLN3Q13286 438 aa9.77□□□□□ -0.85
THUMPD3-207ENST00000461636 FOXR1Q6PIV2 292 aa9.77□□□□□ -0.85
THUMPD3-207ENST00000461636 PRM3Q9NNZ6 103 aa9.77□□□□□ -0.85
THUMPD3-207ENST00000461636 SCTRP47872 440 aa9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 CUEDC1Q9NWM3 386 aaPredicted RBP9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 DYRK1BQ9Y463 629 aa9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 GTF3C3Q9Y5Q9 886 aa9.76□□□□□ -0.85
THUMPD3-207ENST00000461636 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 H7C1W4 665 aa9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 SRSF11Q05519 484 aaKnown RBP9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 RIPOR1Q6ZS17 1223 aa9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 ZNF837Q96EG3 531 aaPredicted RBP9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 ARHGEF10LQ9HCE6 1279 aa9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
THUMPD3-207ENST00000461636 CFTRP13569 1480 aa9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 TRAK2O60296 914 aa9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 ADAMTS2O95450 1211 aa9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 MYCP01106 439 aaPredicted RBP9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 MAP3K10Q02779 954 aa9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
THUMPD3-207ENST00000461636 GRIP2Q9C0E4 1043 aa9.73□□□□□ -0.85
THUMPD3-207ENST00000461636 GNRH1P01148 92 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 POU4F2Q12837 409 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 WDR44Q5JSH3 913 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 MBIPQ9NS73 344 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 PRDM2Q13029 1718 aa9.72□□□□□ -0.85
THUMPD3-207ENST00000461636 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 MARSP56192 900 aaKnown RBP9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 GAS6Q14393 721 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 TMEM151AQ8N4L1 468 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 TRERF1Q96PN7 1200 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.86
THUMPD3-207ENST00000461636 WASLO00401 505 aaPredicted RBP9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 ARHGEF15O94989 841 aa9.7□□□□□ -0.86
THUMPD3-207ENST00000461636 GDF11O95390 407 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms