RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 MAP3K19Q56UN5 1328 aa10.19□□□□□ -0.78
ABCA4-202ENST00000460514 MTHFSP49914 203 aa10.19□□□□□ -0.78
ABCA4-202ENST00000460514 RRS1Q15050 365 aaKnown RBP10.19□□□□□ -0.78
ABCA4-202ENST00000460514 MEX3CQ5U5Q3 659 aaKnown RBP10.19□□□□□ -0.78
ABCA4-202ENST00000460514 LTN1O94822 1766 aa10.19□□□□□ -0.78
ABCA4-202ENST00000460514 CDK12Q9NYV4 1490 aaPredicted RBP10.18□□□□□ -0.78
ABCA4-202ENST00000460514 BLMP54132 1417 aaPredicted RBP10.18□□□□□ -0.78
ABCA4-202ENST00000460514 IP6K1Q92551 441 aa10.18□□□□□ -0.78
ABCA4-202ENST00000460514 EMILIN1Q9Y6C2 1016 aa10.18□□□□□ -0.78
ABCA4-202ENST00000460514 COL14A1Q05707 1796 aaKnown RBP10.17□□□□□ -0.78
ABCA4-202ENST00000460514 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
ABCA4-202ENST00000460514 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
ABCA4-202ENST00000460514 HOXC9P31274 260 aa10.17□□□□□ -0.78
ABCA4-202ENST00000460514 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
ABCA4-202ENST00000460514 NUDCQ9Y266 331 aa10.17□□□□□ -0.78
ABCA4-202ENST00000460514 INSRP06213 1382 aa10.16□□□□□ -0.78
ABCA4-202ENST00000460514 PLCG2P16885 1265 aa10.16□□□□□ -0.78
ABCA4-202ENST00000460514 FBLN1P23142 703 aa10.16□□□□□ -0.78
ABCA4-202ENST00000460514 FAM83GA6ND36 823 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 DIAPH1O60610 1272 aaKnown RBP10.15□□□□□ -0.78
ABCA4-202ENST00000460514 EVA1CP58658 441 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 CHRNA2Q15822 529 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 MIER1Q8N108 512 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
ABCA4-202ENST00000460514 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
ABCA4-202ENST00000460514 HSP90AB2PQ58FF8 381 aa10.14□□□□□ -0.79
ABCA4-202ENST00000460514 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
ABCA4-202ENST00000460514 PEAK1Q9H792 1746 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 NWD2Q9ULI1 1742 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 LMO7Q8WWI1 1683 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 WDR43Q15061 677 aaKnown RBP eCLIP10.13□□□□□ -0.79
ABCA4-202ENST00000460514 ANKRD24Q8TF21 1146 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 BTG4Q9NY30 223 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 LRP6O75581 1613 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 COL18A1P39060 1754 aa10.13□□□□□ -0.79
ABCA4-202ENST00000460514 FAM208AQ9UK61 1670 aaKnown RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 ERBB3P21860 1342 aa10.12□□□□□ -0.79
ABCA4-202ENST00000460514 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
ABCA4-202ENST00000460514 EIF4A2Q14240 407 aaKnown RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 FNBP4Q8N3X1 1017 aaPredicted RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 LTV1Q96GA3 475 aaPredicted RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 PNNQ9H307 717 aaKnown RBP10.12□□□□□ -0.79
ABCA4-202ENST00000460514 SLIT2O94813 1529 aa10.12□□□□□ -0.79
ABCA4-202ENST00000460514 PLCH1Q4KWH8 1693 aa10.12□□□□□ -0.79
ABCA4-202ENST00000460514 CAMTA1Q9Y6Y1 1673 aa10.12□□□□□ -0.79
ABCA4-202ENST00000460514 COL3A1P02461 1466 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-202ENST00000460514 COL5A2P05997 1499 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-202ENST00000460514 WDR17Q8IZU2 1322 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
ABCA4-202ENST00000460514 IL13P35225 146 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 TOM1L2Q6ZVM7 507 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 ILDR1Q86SU0 546 aaPredicted RBP10.11□□□□□ -0.79
ABCA4-202ENST00000460514 UNC5CLQ8IV45 518 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 STRN4Q9NRL3 753 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.11□□□□□ -0.79
ABCA4-202ENST00000460514 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
ABCA4-202ENST00000460514 NEFMP07197 916 aa10.1□□□□□ -0.79
ABCA4-202ENST00000460514 U2AF1L5P0DN76 240 aaPredicted RBP10.1□□□□□ -0.79
ABCA4-202ENST00000460514 U2AF1Q01081 240 aaKnown RBP eCLIP10.1□□□□□ -0.79
ABCA4-202ENST00000460514 NLRP2Q9NX02 1062 aa10.1□□□□□ -0.79
ABCA4-202ENST00000460514 USP21Q9UK80 565 aa10.1□□□□□ -0.79
ABCA4-202ENST00000460514 RGPD5Q99666 1765 aa10.1□□□□□ -0.79
ABCA4-202ENST00000460514 AFF2P51816 1311 aa10.09□□□□□ -0.79
ABCA4-202ENST00000460514 CRB1P82279 1406 aa10.09□□□□□ -0.79
ABCA4-202ENST00000460514 ZNF772Q68DY9 489 aaPredicted RBP10.09□□□□□ -0.79
ABCA4-202ENST00000460514 CARD10Q9BWT7 1032 aa10.09□□□□□ -0.79
ABCA4-202ENST00000460514 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.09□□□□□ -0.79
ABCA4-202ENST00000460514 IGSF1Q8N6C5 1336 aa10.08□□□□□ -0.8
ABCA4-202ENST00000460514 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
ABCA4-202ENST00000460514 VPS72Q15906 364 aa10.08□□□□□ -0.8
ABCA4-202ENST00000460514 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
ABCA4-202ENST00000460514 EYA1Q99502 592 aa10.08□□□□□ -0.8
ABCA4-202ENST00000460514 TRPC5Q9UL62 973 aaPredicted RBP10.08□□□□□ -0.8
ABCA4-202ENST00000460514 THRAP3Q9Y2W1 955 aaKnown RBP10.08□□□□□ -0.8
ABCA4-202ENST00000460514 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
ABCA4-202ENST00000460514 BCL9LQ86UU0 1499 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 FCHSD2O94868 740 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 NBPF6Q5VWK0 638 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
ABCA4-202ENST00000460514 RAPGEF4Q8WZA2 1011 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 NBPF4Q96M43 638 aa10.07□□□□□ -0.8
ABCA4-202ENST00000460514 PLEKHG2Q9H7P9 1386 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 FAM9BQ8IZU0 186 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 CDCA7Q9BWT1 371 aaPredicted RBP10.06□□□□□ -0.8
ABCA4-202ENST00000460514 RGPD1P0DJD0 1748 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 SPATA31A5Q5VU36 1347 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 SPATA31A7Q8IWB4 1347 aa10.06□□□□□ -0.8
ABCA4-202ENST00000460514 KDRP35968 1356 aa10.05□□□□□ -0.8
ABCA4-202ENST00000460514 HMOX1P09601 288 aa10.05□□□□□ -0.8
ABCA4-202ENST00000460514 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-202ENST00000460514 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
ABCA4-202ENST00000460514 ADAMTS8Q9UP79 889 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms