RNA–Protein interactions for RNA: ENST00000460030.1

CENPA-204, Transcript of centromere protein A, humanhuman

TSL 1 (best)

Gene CENPA, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-204ENST00000460030 LRP5O75197 1615 aa25.41■■□□□ 1.66
CENPA-204ENST00000460030 MTHFSP49914 203 aa25.4■■□□□ 1.66
CENPA-204ENST00000460030 MAP2P11137 1827 aaKnown RBP25.4■■□□□ 1.66
CENPA-204ENST00000460030 RGPD2P0DJD1 1756 aa25.39■■□□□ 1.66
CENPA-204ENST00000460030 PLSCR1O15162 318 aa25.39■■□□□ 1.66
CENPA-204ENST00000460030 NBPF14Q5TI25 921 aa25.38■■□□□ 1.65
CENPA-204ENST00000460030 USHBP1Q8N6Y0 703 aa25.38■■□□□ 1.65
CENPA-204ENST00000460030 RGPD3A6NKT7 1758 aaPredicted RBP25.38■■□□□ 1.65
CENPA-204ENST00000460030 RGPD4Q7Z3J3 1758 aa25.38■■□□□ 1.65
CENPA-204ENST00000460030 NBPF6Q5VWK0 638 aa25.37■■□□□ 1.65
CENPA-204ENST00000460030 NBPF4Q96M43 638 aa25.37■■□□□ 1.65
CENPA-204ENST00000460030 NHSQ6T4R5 1651 aa25.36■■□□□ 1.65
CENPA-204ENST00000460030 EIF4A2Q14240 407 aaKnown RBP25.36■■□□□ 1.65
CENPA-204ENST00000460030 DDX54Q8TDD1 881 aaKnown RBP25.36■■□□□ 1.65
CENPA-204ENST00000460030 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
CENPA-204ENST00000460030 MEGF6O75095 1541 aa25.36■■□□□ 1.65
CENPA-204ENST00000460030 PROM2Q8N271 834 aa25.35■■□□□ 1.65
CENPA-204ENST00000460030 PPP2R1AP30153 589 aa25.34■■□□□ 1.65
CENPA-204ENST00000460030 RALBP1Q15311 655 aa25.34■■□□□ 1.65
CENPA-204ENST00000460030 TXNRD1Q16881 649 aa25.31■■□□□ 1.64
CENPA-204ENST00000460030 EYA1Q99502 592 aa25.31■■□□□ 1.64
CENPA-204ENST00000460030 IL13P35225 146 aa25.3■■□□□ 1.64
CENPA-204ENST00000460030 ZCRB1Q8TBF4 217 aaKnown RBP25.29■■□□□ 1.64
CENPA-204ENST00000460030 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
CENPA-204ENST00000460030 SHANK3Q9BYB0 1731 aa25.28■■□□□ 1.64
CENPA-204ENST00000460030 DIAPH1O60610 1272 aaKnown RBP25.27■■□□□ 1.64
CENPA-204ENST00000460030 CFAP53Q96M91 514 aa25.27■■□□□ 1.64
CENPA-204ENST00000460030 BTAF1O14981 1849 aa25.27■■□□□ 1.64
CENPA-204ENST00000460030 IGSF1Q8N6C5 1336 aa25.27■■□□□ 1.64
CENPA-204ENST00000460030 RAPGEF4Q8WZA2 1011 aa25.26■■□□□ 1.63
CENPA-204ENST00000460030 SYTL4Q96C24 671 aaPredicted RBP25.24■■□□□ 1.63
CENPA-204ENST00000460030 PDGFDQ9GZP0 370 aaPredicted RBP25.24■■□□□ 1.63
CENPA-204ENST00000460030 PRKRIP1Q9H875 184 aaPredicted RBP25.24■■□□□ 1.63
CENPA-204ENST00000460030 KAT6BQ8WYB5 2073 aa25.24■■□□□ 1.63
CENPA-204ENST00000460030 DOT1LQ8TEK3 1739 aa25.23■■□□□ 1.63
CENPA-204ENST00000460030 TATP17735 454 aaPredicted RBP25.23■■□□□ 1.63
CENPA-204ENST00000460030 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
CENPA-204ENST00000460030 PRIM1P49642 420 aaKnown RBP25.22■■□□□ 1.63
CENPA-204ENST00000460030 MYBBP1AQ9BQG0 1328 aaKnown RBP25.21■■□□□ 1.63
CENPA-204ENST00000460030 STK32BQ9NY57 414 aa25.21■■□□□ 1.63
CENPA-204ENST00000460030 PLEKHG2Q9H7P9 1386 aa25.19■■□□□ 1.62
CENPA-204ENST00000460030 SLC15A2Q16348 729 aa25.18■■□□□ 1.62
CENPA-204ENST00000460030 SULT6B1Q6IMI4 303 aa25.18■■□□□ 1.62
CENPA-204ENST00000460030 LRRC4BQ9NT99 713 aa25.18■■□□□ 1.62
CENPA-204ENST00000460030 CASZ1Q86V15 1759 aa25.18■■□□□ 1.62
CENPA-204ENST00000460030 KDRP35968 1356 aa25.18■■□□□ 1.62
CENPA-204ENST00000460030 PAPPAQ13219 1627 aa25.17■■□□□ 1.62
CENPA-204ENST00000460030 SPON1Q9HCB6 807 aa25.17■■□□□ 1.62
CENPA-204ENST00000460030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.17■■□□□ 1.62
CENPA-204ENST00000460030 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
CENPA-204ENST00000460030 AEBP1Q8IUX7 1158 aa25.16■■□□□ 1.62
CENPA-204ENST00000460030 PCDH11XQ9BZA7 1347 aa25.15■■□□□ 1.62
CENPA-204ENST00000460030 PCDH11YQ9BZA8 1340 aa25.15■■□□□ 1.62
CENPA-204ENST00000460030 ZBTB7AO95365 584 aa25.14■■□□□ 1.62
CENPA-204ENST00000460030 KCNQ4P56696 695 aa25.14■■□□□ 1.62
CENPA-204ENST00000460030 ZNF827Q17R98 1081 aa25.14■■□□□ 1.62
CENPA-204ENST00000460030 U2SURPO15042 1029 aaKnown RBP25.13■■□□□ 1.61
CENPA-204ENST00000460030 CYP27B1O15528 508 aa25.13■■□□□ 1.61
CENPA-204ENST00000460030 SPG7Q9UQ90 795 aa25.13■■□□□ 1.61
CENPA-204ENST00000460030 ANP32CO43423 234 aa25.12■■□□□ 1.61
CENPA-204ENST00000460030 PPP1R1BQ9UD71 204 aaPredicted RBP25.11■■□□□ 1.61
CENPA-204ENST00000460030 PKD1L3Q7Z443 1732 aa25.11■■□□□ 1.61
CENPA-204ENST00000460030 HMOX1P09601 288 aa25.1■■□□□ 1.61
CENPA-204ENST00000460030 AMOTQ4VCS5 1084 aa25.1■■□□□ 1.61
CENPA-204ENST00000460030 PLEKHO1Q53GL0 409 aaPredicted RBP25.09■■□□□ 1.61
CENPA-204ENST00000460030 ATF5Q9Y2D1 282 aaPredicted RBP25.09■■□□□ 1.61
CENPA-204ENST00000460030 SLC27A3Q5K4L6 730 aa25.08■■□□□ 1.61
CENPA-204ENST00000460030 TOGARAM1Q9Y4F4 1720 aa25.07■■□□□ 1.6
CENPA-204ENST00000460030 U2AF1L5P0DN76 240 aaPredicted RBP25.07■■□□□ 1.6
CENPA-204ENST00000460030 U2AF1Q01081 240 aaKnown RBP eCLIP25.07■■□□□ 1.6
CENPA-204ENST00000460030 AKT1S1Q96B36 256 aa25.06■■□□□ 1.6
CENPA-204ENST00000460030 FCHSD2O94868 740 aa25.05■■□□□ 1.6
CENPA-204ENST00000460030 MPRIPQ6WCQ1 1025 aa25.05■■□□□ 1.6
CENPA-204ENST00000460030 CCNL1Q9UK58 526 aaPredicted RBP25.05■■□□□ 1.6
CENPA-204ENST00000460030 LY75O60449 1722 aa25.05■■□□□ 1.6
CENPA-204ENST00000460030 PTGER2P43116 358 aa25.04■■□□□ 1.6
CENPA-204ENST00000460030 IFNL2Q8IZJ0 200 aa25.04■■□□□ 1.6
CENPA-204ENST00000460030 NKX1-1Q15270 411 aaPredicted RBP25.03■■□□□ 1.6
CENPA-204ENST00000460030 RSPH6AQ9H0K4 717 aa25.03■■□□□ 1.6
CENPA-204ENST00000460030 PHKG2P15735 406 aa25.02■■□□□ 1.6
CENPA-204ENST00000460030 MTFR1LQ9H019 292 aa25.01■■□□□ 1.59
CENPA-204ENST00000460030 PRKAR2BP31323 418 aa25■■□□□ 1.59
CENPA-204ENST00000460030 ZNF530Q6P9A1 599 aaPredicted RBP25■■□□□ 1.59
CENPA-204ENST00000460030 PNPLA7Q6ZV29 1317 aa25■■□□□ 1.59
CENPA-204ENST00000460030 PALLDQ8WX93 1383 aa25■■□□□ 1.59
CENPA-204ENST00000460030 TFCP2L1Q9NZI6 479 aa24.99■■□□□ 1.59
CENPA-204ENST00000460030 HSP90AB1P08238 724 aaKnown RBP24.98■■□□□ 1.59
CENPA-204ENST00000460030 PIGBQ92521 554 aa24.98■■□□□ 1.59
CENPA-204ENST00000460030 ITGB4P16144 1822 aa24.98■■□□□ 1.59
CENPA-204ENST00000460030 TUBGCP6Q96RT7 1819 aa24.98■■□□□ 1.59
CENPA-204ENST00000460030 MTHFSDQ2M296 383 aaKnown RBP24.97■■□□□ 1.59
CENPA-204ENST00000460030 C1orf141Q5JVX7 400 aa24.97■■□□□ 1.59
CENPA-204ENST00000460030 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
CENPA-204ENST00000460030 SGIP1Q9BQI5 828 aa24.96■■□□□ 1.59
CENPA-204ENST00000460030 AKAP4Q5JQC9 854 aa24.95■■□□□ 1.58
CENPA-204ENST00000460030 GAS2L2Q8NHY3 880 aa24.95■■□□□ 1.58
CENPA-204ENST00000460030 DCAF5Q96JK2 942 aa24.95■■□□□ 1.58
CENPA-204ENST00000460030 PHACTR3Q96KR7 559 aa24.95■■□□□ 1.58
CENPA-204ENST00000460030 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
CENPA-204ENST00000460030 QSER1Q2KHR3 1735 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms