RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-202ENST00000459727 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
HDAC3-202ENST00000459727 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
HDAC3-202ENST00000459727 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
HDAC3-202ENST00000459727 SLKQ9H2G2 1235 aaPredicted RBP11□□□□□ -0.65
HDAC3-202ENST00000459727 DLG5Q8TDM6 1919 aa10.99□□□□□ -0.65
HDAC3-202ENST00000459727 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
HDAC3-202ENST00000459727 THEMISQ8N1K5 641 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-202ENST00000459727 ANKRD44Q8N8A2 993 aa10.99□□□□□ -0.65
HDAC3-202ENST00000459727 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
HDAC3-202ENST00000459727 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
HDAC3-202ENST00000459727 FMN2Q9NZ56 1722 aa10.98□□□□□ -0.65
HDAC3-202ENST00000459727 SKOR2Q2VWA4 1001 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-202ENST00000459727 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
HDAC3-202ENST00000459727 C8orf58Q8NAV2 365 aa10.98□□□□□ -0.65
HDAC3-202ENST00000459727 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-202ENST00000459727 XRN1Q8IZH2 1706 aaKnown RBP10.98□□□□□ -0.65
HDAC3-202ENST00000459727 HSP90AB1P08238 724 aaKnown RBP10.97□□□□□ -0.65
HDAC3-202ENST00000459727 MCM4P33991 863 aa10.97□□□□□ -0.65
HDAC3-202ENST00000459727 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
HDAC3-202ENST00000459727 CRB1P82279 1406 aa10.97□□□□□ -0.65
HDAC3-202ENST00000459727 PXDNLA1KZ92 1463 aa10.97□□□□□ -0.65
HDAC3-202ENST00000459727 LRRC37A3O60309 1634 aa10.96□□□□□ -0.65
HDAC3-202ENST00000459727 ATP10DQ9P241 1426 aa10.96□□□□□ -0.65
HDAC3-202ENST00000459727 IGSF1Q8N6C5 1336 aa10.96□□□□□ -0.65
HDAC3-202ENST00000459727 RABEP1Q15276 862 aa10.96□□□□□ -0.65
HDAC3-202ENST00000459727 STK31Q9BXU1 1019 aa10.96□□□□□ -0.65
HDAC3-202ENST00000459727 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 RGS12O14924 1447 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 REC8O95072 547 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
HDAC3-202ENST00000459727 TBC1D9Q6ZT07 1266 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 AMOTL2Q9Y2J4 779 aa10.95□□□□□ -0.66
HDAC3-202ENST00000459727 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
HDAC3-202ENST00000459727 K7ELQ4 463 aaPredicted RBP10.94□□□□□ -0.66
HDAC3-202ENST00000459727 GNAI3P08754 354 aa10.94□□□□□ -0.66
HDAC3-202ENST00000459727 AMPHP49418 695 aa10.94□□□□□ -0.66
HDAC3-202ENST00000459727 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
HDAC3-202ENST00000459727 NGDNQ8NEJ9 315 aaKnown RBP10.94□□□□□ -0.66
HDAC3-202ENST00000459727 ADGRL3Q9HAR2 1447 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 FER1L4A9Z1Z3 1794 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 GOLGA6L3A6NEY3 463 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
HDAC3-202ENST00000459727 FBLN1P23142 703 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 LTKP29376 864 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 DDIT3P35638 169 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 CCDC30Q5VVM6 783 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 SIRT2Q8IXJ6 389 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 TSPYL4Q9UJ04 414 aa10.93□□□□□ -0.66
HDAC3-202ENST00000459727 MSH6P52701 1360 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 FAM83GA6ND36 823 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-202ENST00000459727 AEBP1Q8IUX7 1158 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 PLEKHM2Q8IWE5 1019 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 OSBPL3Q9H4L5 887 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 PIK3C2AO00443 1686 aa10.92□□□□□ -0.66
HDAC3-202ENST00000459727 MAP3K5Q99683 1374 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 AOX1Q06278 1338 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 ST18O60284 1047 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 GNAI2P04899 355 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 HOXB7P09629 217 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 MCM2P49736 904 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 RAB3GAP1Q15042 981 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 HSP90AB2PQ58FF8 381 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 SRCIN1Q9C0H9 1055 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 C1orf115Q9H7X2 142 aa10.91□□□□□ -0.66
HDAC3-202ENST00000459727 CWC22Q9HCG8 908 aaKnown RBP10.91□□□□□ -0.66
HDAC3-202ENST00000459727 N4BP2Q86UW6 1770 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-202ENST00000459727 GNAT3A8MTJ3 354 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 TRAK2O60296 914 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 MCCP23508 829 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 MRE11P49959 708 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 NUCB2P80303 420 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 CLEC17AQ6ZS10 378 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 MCM10Q7L590 875 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 HDAC5Q9UQL6 1122 aa10.9□□□□□ -0.66
HDAC3-202ENST00000459727 FSD2A1L4K1 749 aa10.89□□□□□ -0.67
HDAC3-202ENST00000459727 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
HDAC3-202ENST00000459727 OVOS2A0A0G2JMS6 1433 aa10.89□□□□□ -0.67
HDAC3-202ENST00000459727 CEP170BQ9Y4F5 1589 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-202ENST00000459727 IBTKQ9P2D0 1353 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-202ENST00000459727 FAM208AQ9UK61 1670 aaKnown RBP10.89□□□□□ -0.67
HDAC3-202ENST00000459727 ERC2O15083 957 aa10.88□□□□□ -0.67
HDAC3-202ENST00000459727 NCAPD2Q15021 1401 aa10.88□□□□□ -0.67
HDAC3-202ENST00000459727 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
HDAC3-202ENST00000459727 SLC26A8Q96RN1 970 aa10.88□□□□□ -0.67
HDAC3-202ENST00000459727 PHRF1Q9P1Y6 1649 aaKnown RBP10.87□□□□□ -0.67
HDAC3-202ENST00000459727 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
HDAC3-202ENST00000459727 NLRP6P59044 892 aa10.87□□□□□ -0.67
HDAC3-202ENST00000459727 TAF7Q15545 349 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-202ENST00000459727 KCNH5Q8NCM2 988 aa10.87□□□□□ -0.67
HDAC3-202ENST00000459727 EYA1Q99502 592 aa10.87□□□□□ -0.67
HDAC3-202ENST00000459727 KIF2CQ99661 725 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms