RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 UNC5CLQ8IV45 518 aa21.93■■□□□ 1.1
LINC00963-208ENST00000454968 VIRMAQ69YN4 1812 aaKnown RBP21.93■■□□□ 1.1
LINC00963-208ENST00000454968 LRRC37A3O60309 1634 aa21.92■■□□□ 1.1
LINC00963-208ENST00000454968 RRP7AQ9Y3A4 280 aaKnown RBP21.92■■□□□ 1.1
LINC00963-208ENST00000454968 SPATA31A1Q5TZJ5 1347 aa21.92■■□□□ 1.1
LINC00963-208ENST00000454968 RIPK4P57078 832 aa21.91■■□□□ 1.1
LINC00963-208ENST00000454968 C8orf37Q96NL8 207 aa21.91■■□□□ 1.1
LINC00963-208ENST00000454968 SPATA31A5Q5VU36 1347 aa21.91■■□□□ 1.1
LINC00963-208ENST00000454968 SPATA31A7Q8IWB4 1347 aa21.91■■□□□ 1.1
LINC00963-208ENST00000454968 WDR63Q8IWG1 891 aa21.9■■□□□ 1.1
LINC00963-208ENST00000454968 RAPGEF4Q8WZA2 1011 aa21.9■■□□□ 1.1
LINC00963-208ENST00000454968 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
LINC00963-208ENST00000454968 THRAP3Q9Y2W1 955 aaKnown RBP21.9■■□□□ 1.1
LINC00963-208ENST00000454968 SENP3-EIF4A1A0A087X0R7 540 aa21.89■■□□□ 1.1
LINC00963-208ENST00000454968 HTATSF1O43719 755 aaKnown RBP21.89■■□□□ 1.1
LINC00963-208ENST00000454968 VPS72Q15906 364 aa21.89■■□□□ 1.1
LINC00963-208ENST00000454968 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.1
LINC00963-208ENST00000454968 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
LINC00963-208ENST00000454968 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
LINC00963-208ENST00000454968 IL16Q14005 1332 aa21.88■■□□□ 1.09
LINC00963-208ENST00000454968 IL2RBP14784 551 aa21.88■■□□□ 1.09
LINC00963-208ENST00000454968 TRMT2AQ8IZ69 625 aaKnown RBP21.88■■□□□ 1.09
LINC00963-208ENST00000454968 SALL2Q9Y467 1007 aaPredicted RBP21.88■■□□□ 1.09
LINC00963-208ENST00000454968 MAP3K5Q99683 1374 aa21.87■■□□□ 1.09
LINC00963-208ENST00000454968 NEUROD2Q15784 382 aa21.87■■□□□ 1.09
LINC00963-208ENST00000454968 SCN11AQ9UI33 1791 aa21.86■■□□□ 1.09
LINC00963-208ENST00000454968 ATRNO75882 1429 aa21.86■■□□□ 1.09
LINC00963-208ENST00000454968 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
LINC00963-208ENST00000454968 BARGINQ6ZT62 677 aa21.86■■□□□ 1.09
LINC00963-208ENST00000454968 CEMIPQ8WUJ3 1361 aa21.85■■□□□ 1.09
LINC00963-208ENST00000454968 GNAT3A8MTJ3 354 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 SLFN5Q08AF3 891 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 AKAP4Q5JQC9 854 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 CDCA7Q9BWT1 371 aaPredicted RBP21.84■■□□□ 1.09
LINC00963-208ENST00000454968 USP21Q9UK80 565 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 SIPA1L3O60292 1781 aaPredicted RBP21.84■■□□□ 1.09
LINC00963-208ENST00000454968 GLI3P10071 1580 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
LINC00963-208ENST00000454968 AFF2P51816 1311 aa21.83■■□□□ 1.09
LINC00963-208ENST00000454968 MEX3CQ5U5Q3 659 aaKnown RBP21.82■■□□□ 1.08
LINC00963-208ENST00000454968 CDCA7LQ96GN5 454 aa21.82■■□□□ 1.08
LINC00963-208ENST00000454968 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
LINC00963-208ENST00000454968 E9PSI1 815 aa21.81■■□□□ 1.08
LINC00963-208ENST00000454968 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
LINC00963-208ENST00000454968 TNS2Q63HR2 1409 aa21.81■■□□□ 1.08
LINC00963-208ENST00000454968 CYP27B1O15528 508 aa21.8■■□□□ 1.08
LINC00963-208ENST00000454968 CENPBP07199 599 aaPredicted RBP21.8■■□□□ 1.08
LINC00963-208ENST00000454968 ZNF853P0CG23 659 aa21.8■■□□□ 1.08
LINC00963-208ENST00000454968 PHKG2P15735 406 aa21.8■■□□□ 1.08
LINC00963-208ENST00000454968 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
LINC00963-208ENST00000454968 DUSP27Q5VZP5 1158 aa21.8■■□□□ 1.08
LINC00963-208ENST00000454968 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
LINC00963-208ENST00000454968 IL17REQ8NFR9 667 aa21.8■■□□□ 1.08
LINC00963-208ENST00000454968 MRC1P22897 1456 aa21.79■■□□□ 1.08
LINC00963-208ENST00000454968 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
LINC00963-208ENST00000454968 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
LINC00963-208ENST00000454968 NKX1-1Q15270 411 aaPredicted RBP21.79■■□□□ 1.08
LINC00963-208ENST00000454968 IFNL2Q8IZJ0 200 aa21.79■■□□□ 1.08
LINC00963-208ENST00000454968 USP35Q9P2H5 1018 aa21.79■■□□□ 1.08
LINC00963-208ENST00000454968 KDM6AO15550 1401 aaPredicted RBP21.78■■□□□ 1.08
LINC00963-208ENST00000454968 ONECUT3O60422 494 aaPredicted RBP21.77■■□□□ 1.08
LINC00963-208ENST00000454968 DCTN1Q14203 1278 aa21.77■■□□□ 1.08
LINC00963-208ENST00000454968 C1orf141Q5JVX7 400 aa21.77■■□□□ 1.08
LINC00963-208ENST00000454968 MCM10Q7L590 875 aa21.77■■□□□ 1.08
LINC00963-208ENST00000454968 RTF1Q92541 710 aaKnown RBP21.77■■□□□ 1.08
LINC00963-208ENST00000454968 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.08
LINC00963-208ENST00000454968 IFT57Q9NWB7 429 aa21.77■■□□□ 1.08
LINC00963-208ENST00000454968 TRPC5Q9UL62 973 aaPredicted RBP21.77■■□□□ 1.08
LINC00963-208ENST00000454968 GJD4Q96KN9 370 aaPredicted RBP21.76■■□□□ 1.07
LINC00963-208ENST00000454968 CFAP44Q96MT7 982 aa21.75■■□□□ 1.07
LINC00963-208ENST00000454968 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
LINC00963-208ENST00000454968 KDM3BQ7LBC6 1761 aa21.75■■□□□ 1.07
LINC00963-208ENST00000454968 RNMTO43148 476 aaKnown RBP21.74■■□□□ 1.07
LINC00963-208ENST00000454968 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
LINC00963-208ENST00000454968 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
LINC00963-208ENST00000454968 CHL1O00533 1208 aa21.73■■□□□ 1.07
LINC00963-208ENST00000454968 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
LINC00963-208ENST00000454968 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
LINC00963-208ENST00000454968 GNAI1P63096 354 aa21.72■■□□□ 1.07
LINC00963-208ENST00000454968 MYH16Q9H6N6 1097 aa21.72■■□□□ 1.07
LINC00963-208ENST00000454968 FANCIQ9NVI1 1328 aa21.71■■□□□ 1.07
LINC00963-208ENST00000454968 EXOC5O00471 708 aa21.71■■□□□ 1.07
LINC00963-208ENST00000454968 MPRIPQ6WCQ1 1025 aa21.71■■□□□ 1.07
LINC00963-208ENST00000454968 CCDC9Q9Y3X0 531 aaKnown RBP21.71■■□□□ 1.07
LINC00963-208ENST00000454968 ZNF772Q68DY9 489 aaPredicted RBP21.7■■□□□ 1.06
LINC00963-208ENST00000454968 ITGB4P16144 1822 aa21.7■■□□□ 1.06
LINC00963-208ENST00000454968 DDB1Q16531 1140 aa21.69■■□□□ 1.06
LINC00963-208ENST00000454968 FAM98CQ17RN3 349 aaKnown RBP21.69■■□□□ 1.06
LINC00963-208ENST00000454968 QTRT2Q9H974 415 aaKnown RBP21.69■■□□□ 1.06
LINC00963-208ENST00000454968 TAF7Q15545 349 aaPredicted RBP21.68■■□□□ 1.06
LINC00963-208ENST00000454968 MBIPQ9NS73 344 aa21.68■■□□□ 1.06
LINC00963-208ENST00000454968 PAPPAQ13219 1627 aa21.68■■□□□ 1.06
LINC00963-208ENST00000454968 BCL9O00512 1426 aa21.66■■□□□ 1.06
LINC00963-208ENST00000454968 ERVV-2B6SEH9 535 aa21.66■■□□□ 1.06
LINC00963-208ENST00000454968 SLC52A2Q9HAB3 445 aa21.66■■□□□ 1.06
LINC00963-208ENST00000454968 TSR2Q969E8 191 aaKnown RBP21.65■■□□□ 1.06
LINC00963-208ENST00000454968 DOT1LQ8TEK3 1739 aa21.65■■□□□ 1.06
LINC00963-208ENST00000454968 UBR2Q8IWV8 1755 aa21.65■■□□□ 1.06
LINC00963-208ENST00000454968 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms