RNA–Protein interactions for RNA: ENST00000449289.5

GAS5-219, Transcript of growth arrest specific 5, human

TSL 3 BASIC

Gene GAS5, Length 542 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GAS5-219	ENST00000449289	THSD7A	Q9UPZ6	1657 aa		10.89	□□□□□ -0.67
GAS5-219	ENST00000449289	PCDH11X	Q9BZA7	1347 aa		10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	PCDH11Y	Q9BZA8	1340 aa		10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	APBA3	O96018	575 aa		10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	NEFM	P07197	916 aa		10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	SYTL4	Q96C24	671 aa	Predicted RBP	10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	EYA1	Q99502	592 aa		10.88	□□□□□ -0.67
GAS5-219	ENST00000449289	ANKRD26	Q9UPS8	1709 aa		10.87	□□□□□ -0.67
GAS5-219	ENST00000449289	DISP2	A7MBM2	1401 aa		10.87	□□□□□ -0.67
GAS5-219	ENST00000449289	SULT6B1	Q6IMI4	303 aa		10.87	□□□□□ -0.67
GAS5-219	ENST00000449289	MARCH10	Q8NA82	808 aa	Predicted RBP	10.87	□□□□□ -0.67
GAS5-219	ENST00000449289	FAM208A	Q9UK61	1670 aa	Known RBP	10.87	□□□□□ -0.67
GAS5-219	ENST00000449289	RALBP1	Q15311	655 aa		10.86	□□□□□ -0.67
GAS5-219	ENST00000449289	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.86	□□□□□ -0.67
GAS5-219	ENST00000449289	C1orf141	Q5JVX7	400 aa		10.86	□□□□□ -0.67
GAS5-219	ENST00000449289	ACSBG1	Q96GR2	724 aa		10.86	□□□□□ -0.67
GAS5-219	ENST00000449289	PPP2R1A	P30153	589 aa		10.85	□□□□□ -0.67
GAS5-219	ENST00000449289	AMOT	Q4VCS5	1084 aa		10.85	□□□□□ -0.67
GAS5-219	ENST00000449289	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.85	□□□□□ -0.67
GAS5-219	ENST00000449289	IGSF1	Q8N6C5	1336 aa		10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	MEGF6	O75095	1541 aa		10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	LRRC37A3	O60309	1634 aa		10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	PEAK1	Q9H792	1746 aa		10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	IL13	P35225	146 aa		10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	EZH2	Q15910	746 aa	Known RBP	10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	PARP4	Q9UKK3	1724 aa	Known RBP	10.84	□□□□□ -0.67
GAS5-219	ENST00000449289	HSP90AB1	P08238	724 aa	Known RBP	10.83	□□□□□ -0.68
GAS5-219	ENST00000449289	HMOX1	P09601	288 aa		10.83	□□□□□ -0.68
GAS5-219	ENST00000449289	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.83	□□□□□ -0.68
GAS5-219	ENST00000449289	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
GAS5-219	ENST00000449289	IFNL2	Q8IZJ0	200 aa		10.83	□□□□□ -0.68
GAS5-219	ENST00000449289	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	1e-13	■□□□□ 8.5
GAS5-219	ENST00000449289	TNS1	Q9HBL0	1735 aa	Known RBP	10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	ANP32C	O43423	234 aa		10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	NBPF14	Q5TI25	921 aa		10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	PNN	Q9H307	717 aa	Known RBP	10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	RGPD5	Q99666	1765 aa		10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.82	□□□□□ -0.68
GAS5-219	ENST00000449289	PARD3	Q8TEW0	1356 aa		10.81	□□□□□ -0.68
GAS5-219	ENST00000449289	PLEKHG2	Q9H7P9	1386 aa		10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	PRIM1	P49642	420 aa	Known RBP	10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	C1QTNF8	P60827	252 aa		10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	WDR43	Q15061	677 aa	Known RBP eCLIP	10.8	□□□□□ -0.68	1e-14	■■□□□ 13.7
GAS5-219	ENST00000449289	AEBP1	Q8IUX7	1158 aa		10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	BCL9	O00512	1426 aa		10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	RGPD1	P0DJD0	1748 aa		10.8	□□□□□ -0.68
GAS5-219	ENST00000449289	KCNQ2	O43526	872 aa		10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	PHKG2	P15735	406 aa		10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	HMGB2	P26583	209 aa	Known RBP	10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	MPRIP	Q6WCQ1	1025 aa		10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	TMOD3	Q9NYL9	352 aa		10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	MAPK8IP3	Q9UPT6	1336 aa		10.79	□□□□□ -0.68
GAS5-219	ENST00000449289	NCAPD2	Q15021	1401 aa		10.78	□□□□□ -0.68
GAS5-219	ENST00000449289	PLSCR1	O15162	318 aa		10.78	□□□□□ -0.68
GAS5-219	ENST00000449289	GAS2L2	Q8NHY3	880 aa		10.78	□□□□□ -0.68
GAS5-219	ENST00000449289	DCAF5	Q96JK2	942 aa		10.78	□□□□□ -0.68
GAS5-219	ENST00000449289	WNK3	Q9BYP7	1800 aa		10.78	□□□□□ -0.68
GAS5-219	ENST00000449289	CYP27B1	O15528	508 aa		10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	PRKAR2B	P31323	418 aa		10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	CABP4	P57796	275 aa		10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	AKAP4	Q5JQC9	854 aa		10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	RTF1	Q92541	710 aa	Known RBP	10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	SMARCC1	Q92922	1105 aa	Predicted RBP	10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	KDR	P35968	1356 aa		10.77	□□□□□ -0.69
GAS5-219	ENST00000449289	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.76	□□□□□ -0.69
GAS5-219	ENST00000449289	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.76	□□□□□ -0.69
GAS5-219	ENST00000449289	MAP2	P11137	1827 aa	Known RBP	10.76	□□□□□ -0.69
GAS5-219	ENST00000449289	FCHSD2	O94868	740 aa		10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	NKX1-1	Q15270	411 aa	Predicted RBP	10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	TXNRD1	Q16881	649 aa		10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	CAMKK2	Q96RR4	588 aa		10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	STK32B	Q9NY57	414 aa		10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	NUP188	Q5SRE5	1749 aa		10.75	□□□□□ -0.69
GAS5-219	ENST00000449289	ERVV-2	B6SEH9	535 aa		10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	TEF	Q10587	303 aa		10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	MTHFSD	Q2M296	383 aa	Known RBP	10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	SLC27A3	Q5K4L6	730 aa		10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	CCNL1	Q9UK58	526 aa	Predicted RBP	10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	COL3A1	P02461	1466 aa	Predicted RBP	10.74	□□□□□ -0.69
GAS5-219	ENST00000449289	GNAT3	A8MTJ3	354 aa		10.73	□□□□□ -0.69
GAS5-219	ENST00000449289	PTF1A	Q7RTS3	328 aa		10.73	□□□□□ -0.69
GAS5-219	ENST00000449289	RSPH6A	Q9H0K4	717 aa		10.73	□□□□□ -0.69
GAS5-219	ENST00000449289	PALLD	Q8WX93	1383 aa		10.73	□□□□□ -0.69
GAS5-219	ENST00000449289	CHD4	Q14839	1912 aa		10.72	□□□□□ -0.69
GAS5-219	ENST00000449289	MAP3K5	Q99683	1374 aa		10.72	□□□□□ -0.69
GAS5-219	ENST00000449289	DCAF8L1	A6NGE4	600 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	RGPD2	P0DJD1	1756 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	NHS	Q6T4R5	1651 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	TTC5	Q8N0Z6	440 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	PIGB	Q92521	554 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	RREB1	Q92766	1687 aa		10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	RBM42	Q9BTD8	480 aa	Known RBP	10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.71	□□□□□ -0.69
GAS5-219	ENST00000449289	LMOD3	Q0VAK6	560 aa		10.7	□□□□□ -0.7
GAS5-219	ENST00000449289	NFATC2IP	Q8NCF5	419 aa		10.7	□□□□□ -0.7
GAS5-219	ENST00000449289	MRS2	Q9HD23	443 aa		10.7	□□□□□ -0.7
GAS5-219	ENST00000449289	TFCP2L1	Q9NZI6	479 aa		10.7	□□□□□ -0.7
GAS5-219	ENST00000449289	PKD1L3	Q7Z443	1732 aa		10.7	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms