RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 ITPKCQ96DU7 683 aa9.34□□□□□ -0.91
PFDN4-202ENST00000441080 LILRA1O75019 489 aa9.33□□□□□ -0.92
PFDN4-202ENST00000441080 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
PFDN4-202ENST00000441080 OGFOD1Q8N543 542 aa9.33□□□□□ -0.92
PFDN4-202ENST00000441080 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
PFDN4-202ENST00000441080 TIMP2P16035 220 aa9.32□□□□□ -0.92
PFDN4-202ENST00000441080 PSME1Q06323 249 aa9.32□□□□□ -0.92
PFDN4-202ENST00000441080 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
PFDN4-202ENST00000441080 OSBPL3Q9H4L5 887 aa9.32□□□□□ -0.92
PFDN4-202ENST00000441080 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
PFDN4-202ENST00000441080 DNAAF2Q9NVR5 837 aaKnown RBP9.32□□□□□ -0.92
PFDN4-202ENST00000441080 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L15C9J2P7 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L10C9JJH3 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L13C9JLJ4 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L12C9JPN9 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L11C9JVI0 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L21D6R901 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L18D6R9N7 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L22D6RA61 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L17D6RBQ6 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L19D6RCP7 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L20D6RJB6 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 GFRA3O60609 400 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 ATG7O95352 703 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 CLDN10P78369 228 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 USP17L24Q0WX57 530 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
PFDN4-202ENST00000441080 ARXQ96QS3 562 aa9.31□□□□□ -0.92
PFDN4-202ENST00000441080 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
PFDN4-202ENST00000441080 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
PFDN4-202ENST00000441080 CYP2U1Q7Z449 544 aa9.3□□□□□ -0.92
PFDN4-202ENST00000441080 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
PFDN4-202ENST00000441080 PCDHGA11Q9Y5H2 935 aa9.3□□□□□ -0.92
PFDN4-202ENST00000441080 CBLBQ13191 982 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 PTK7Q13308 1070 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 KIAA1024Q9UPX6 916 aa9.29□□□□□ -0.92
PFDN4-202ENST00000441080 ADH1AP07327 375 aa9.28□□□□□ -0.92
PFDN4-202ENST00000441080 Q6ZVU0 165 aa9.28□□□□□ -0.92
PFDN4-202ENST00000441080 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
PFDN4-202ENST00000441080 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
PFDN4-202ENST00000441080 CAPN5O15484 640 aaPredicted RBP9.27□□□□□ -0.93
PFDN4-202ENST00000441080 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
PFDN4-202ENST00000441080 ELOAQ14241 798 aaKnown RBP9.27□□□□□ -0.93
PFDN4-202ENST00000441080 LAPTM4AQ15012 233 aa9.27□□□□□ -0.93
PFDN4-202ENST00000441080 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
PFDN4-202ENST00000441080 SIX5Q8N196 739 aa9.27□□□□□ -0.93
PFDN4-202ENST00000441080 TPCN2Q8NHX9 752 aa9.27□□□□□ -0.93
PFDN4-202ENST00000441080 RBM19Q9Y4C8 960 aaKnown RBP9.27□□□□□ -0.93
PFDN4-202ENST00000441080 DGAT1O75907 488 aa9.26□□□□□ -0.93
PFDN4-202ENST00000441080 DPYDQ12882 1025 aa9.26□□□□□ -0.93
PFDN4-202ENST00000441080 CCDC102BQ68D86 513 aa9.26□□□□□ -0.93
PFDN4-202ENST00000441080 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
PFDN4-202ENST00000441080 RETREG2Q8NC44 543 aa9.26□□□□□ -0.93
PFDN4-202ENST00000441080 GNRH1P01148 92 aa9.25□□□□□ -0.93
PFDN4-202ENST00000441080 AVPP01185 164 aa9.25□□□□□ -0.93
PFDN4-202ENST00000441080 FAM200AQ8TCP9 573 aa9.25□□□□□ -0.93
PFDN4-202ENST00000441080 ZMIZ1Q9ULJ6 1067 aa9.25□□□□□ -0.93
PFDN4-202ENST00000441080 GDF10P55107 478 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 RELBQ01201 579 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 STK32AQ8WU08 396 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 AGBL1Q96MI9 1066 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 IRX2Q9BZI1 471 aaPredicted RBP9.24□□□□□ -0.93
PFDN4-202ENST00000441080 ARHGEF10LQ9HCE6 1279 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
PFDN4-202ENST00000441080 STAU1O95793 577 aaKnown RBP9.23□□□□□ -0.93
PFDN4-202ENST00000441080 PTGIRP43119 386 aa9.23□□□□□ -0.93
PFDN4-202ENST00000441080 SCNN1DP51172 638 aa9.23□□□□□ -0.93
PFDN4-202ENST00000441080 SEC13P55735 322 aa9.23□□□□□ -0.93
PFDN4-202ENST00000441080 CTC1Q2NKJ3 1217 aa9.23□□□□□ -0.93
PFDN4-202ENST00000441080 ESCO1Q5FWF5 840 aa9.23□□□□□ -0.93
PFDN4-202ENST00000441080 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
PFDN4-202ENST00000441080 DKK1O94907 266 aa9.22□□□□□ -0.93
PFDN4-202ENST00000441080 TMEM164Q5U3C3 297 aa9.22□□□□□ -0.93
PFDN4-202ENST00000441080 KDF1Q8NAX2 398 aaPredicted RBP9.22□□□□□ -0.93
PFDN4-202ENST00000441080 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.22□□□□□ -0.93
PFDN4-202ENST00000441080 ETNK1Q9HBU6 452 aa9.22□□□□□ -0.93
PFDN4-202ENST00000441080 TMEM229AB2RXF0 380 aa9.21□□□□□ -0.94
PFDN4-202ENST00000441080 UPP2O95045 317 aa9.21□□□□□ -0.94
PFDN4-202ENST00000441080 INHAP05111 366 aa9.21□□□□□ -0.94
PFDN4-202ENST00000441080 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
PFDN4-202ENST00000441080 TSEN34Q9BSV6 310 aaKnown RBP9.21□□□□□ -0.94
PFDN4-202ENST00000441080 ZNF358Q9NW07 568 aa9.21□□□□□ -0.94
PFDN4-202ENST00000441080 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
PFDN4-202ENST00000441080 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
PFDN4-202ENST00000441080 MEN1O00255 615 aa9.2□□□□□ -0.94
PFDN4-202ENST00000441080 WASLO00401 505 aaPredicted RBP9.2□□□□□ -0.94
PFDN4-202ENST00000441080 AXIN1O15169 862 aa9.2□□□□□ -0.94
PFDN4-202ENST00000441080 PDE4CQ08493 712 aa9.2□□□□□ -0.94
PFDN4-202ENST00000441080 LINC00528Q8N1L1 170 aa9.2□□□□□ -0.94
PFDN4-202ENST00000441080 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
PFDN4-202ENST00000441080 BACH1O14867 736 aa9.19□□□□□ -0.94
PFDN4-202ENST00000441080 IL2RAP01589 272 aa9.19□□□□□ -0.94
PFDN4-202ENST00000441080 CLN3Q13286 438 aa9.19□□□□□ -0.94
PFDN4-202ENST00000441080 CNKSR1Q969H4 720 aa9.19□□□□□ -0.94
PFDN4-202ENST00000441080 SERTAD1Q9UHV2 236 aa9.19□□□□□ -0.94
PFDN4-202ENST00000441080 TMEM88BA6NKF7 163 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms