RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
LRCH3-206ENST00000438796 NUTM1Q86Y26 1132 aa16.22■□□□□ 0.19
LRCH3-206ENST00000438796 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
LRCH3-206ENST00000438796 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
LRCH3-206ENST00000438796 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
LRCH3-206ENST00000438796 PDRG1Q9NUG6 133 aa16.21■□□□□ 0.19
LRCH3-206ENST00000438796 CCP110O43303 1012 aa16.21■□□□□ 0.18
LRCH3-206ENST00000438796 CCT4P50991 539 aaKnown RBP16.21■□□□□ 0.18
LRCH3-206ENST00000438796 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.18
LRCH3-206ENST00000438796 THEMISQ8N1K5 641 aaPredicted RBP16.2■□□□□ 0.18
LRCH3-206ENST00000438796 SEC63Q9UGP8 760 aaKnown RBP16.2■□□□□ 0.18
LRCH3-206ENST00000438796 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 MYOM3Q5VTT5 1437 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 CEP126Q9P2H0 1117 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 ANAPC15P60006 121 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 CCDC96Q2M329 555 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 CCDC82Q8N4S0 544 aa16.2■□□□□ 0.18
LRCH3-206ENST00000438796 EIF5P55010 431 aaKnown RBP16.2■□□□□ 0.18
LRCH3-206ENST00000438796 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
LRCH3-206ENST00000438796 TRIM21P19474 475 aaKnown RBP16.19■□□□□ 0.18
LRCH3-206ENST00000438796 MPRIPQ6WCQ1 1025 aa16.19■□□□□ 0.18
LRCH3-206ENST00000438796 TNNT1P13805 278 aa16.19■□□□□ 0.18
LRCH3-206ENST00000438796 BLOC1S2Q6QNY1 142 aa16.19■□□□□ 0.18
LRCH3-206ENST00000438796 CCDC112Q8NEF3 446 aa16.19■□□□□ 0.18
LRCH3-206ENST00000438796 CCDC192P0DO97 292 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 DNA2P51530 1060 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 CAMK4Q16566 473 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 STARD3NLO95772 234 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 TNIP1Q15025 636 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
LRCH3-206ENST00000438796 CCDC113Q9H0I3 377 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
LRCH3-206ENST00000438796 MRE11P49959 708 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 RABEP1Q15276 862 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 AEBP1Q8IUX7 1158 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 TMX1Q9H3N1 280 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 EZRP15311 586 aaKnown RBP16.17■□□□□ 0.18
LRCH3-206ENST00000438796 PPP4R3AQ6IN85 833 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 GCC1Q96CN9 775 aa16.17■□□□□ 0.18
LRCH3-206ENST00000438796 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
LRCH3-206ENST00000438796 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 RTEL1-TNFRSF6BF6WH68 1400 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 MCM2P49736 904 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 GUCY1B3Q02153 619 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 KLHL10Q6JEL2 608 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 CDKL5O76039 1030 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 MYD88Q99836 296 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 KIAA0754O94854 1291 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 KRT85P78386 507 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 CAVIN4Q5BKX8 364 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 MBD3O95983 291 aa16.16■□□□□ 0.18
LRCH3-206ENST00000438796 PNISRQ8TF01 805 aaKnown RBP16.15■□□□□ 0.18
LRCH3-206ENST00000438796 RPGRQ92834 1020 aaKnown RBP16.15■□□□□ 0.18
LRCH3-206ENST00000438796 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.182e-6■■□□□ 12.8
LRCH3-206ENST00000438796 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
LRCH3-206ENST00000438796 CTNNBL1Q8WYA6 563 aaPredicted RBP16.15■□□□□ 0.18
LRCH3-206ENST00000438796 DRC1Q96MC2 740 aa16.15■□□□□ 0.18
LRCH3-206ENST00000438796 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
LRCH3-206ENST00000438796 GOPCQ9HD26 462 aa16.15■□□□□ 0.18
LRCH3-206ENST00000438796 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
LRCH3-206ENST00000438796 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
LRCH3-206ENST00000438796 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
LRCH3-206ENST00000438796 SMARCA5O60264 1052 aaPredicted RBP16.14■□□□□ 0.17
LRCH3-206ENST00000438796 POTEJP0CG39 1038 aa16.14■□□□□ 0.17
LRCH3-206ENST00000438796 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
LRCH3-206ENST00000438796 WDHD1O75717 1129 aaPredicted RBP16.14■□□□□ 0.17
LRCH3-206ENST00000438796 MACROD2A1Z1Q3 448 aa16.13■□□□□ 0.17
LRCH3-206ENST00000438796 HMGN5P82970 282 aaKnown RBP16.13■□□□□ 0.17
LRCH3-206ENST00000438796 FILIP1Q7Z7B0 1213 aa16.13■□□□□ 0.17
LRCH3-206ENST00000438796 CBFA2T2O43439 604 aa16.13■□□□□ 0.17
LRCH3-206ENST00000438796 TAF4BQ92750 862 aa16.13■□□□□ 0.17
LRCH3-206ENST00000438796 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 MCM10Q7L590 875 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 EPB41L2O43491 1005 aaKnown RBP16.12■□□□□ 0.17
LRCH3-206ENST00000438796 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 CTNNA3Q9UI47 895 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 CUX1P39880 1505 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 CCDC144CPQ8IYA2 1237 aa16.12■□□□□ 0.17
LRCH3-206ENST00000438796 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
LRCH3-206ENST00000438796 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 EXOC6BQ9Y2D4 811 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 COMMD10Q9Y6G5 202 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 ZNF444Q8N0Y2 327 aaPredicted RBP16.11■□□□□ 0.17
LRCH3-206ENST00000438796 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 GPTP24298 496 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 TXLNBQ8N3L3 684 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 ZNF397Q8NF99 534 aaPredicted RBP16.11■□□□□ 0.17
LRCH3-206ENST00000438796 K7ELQ4 463 aaPredicted RBP16.11■□□□□ 0.17
LRCH3-206ENST00000438796 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
LRCH3-206ENST00000438796 GOLGA6L10A0A0M3HER8 536 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 UPF3BQ9BZI7 483 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms