RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ZNF592Q92610 1267 aa8.17□□□□□ -1.1
HMGB1P31-201ENST00000437242 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
HMGB1P31-201ENST00000437242 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
HMGB1P31-201ENST00000437242 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
HMGB1P31-201ENST00000437242 WHAMMQ8TF30 809 aa8.16□□□□□ -1.1
HMGB1P31-201ENST00000437242 GPC1P35052 558 aa8.15□□□□□ -1.1
HMGB1P31-201ENST00000437242 NR1H3Q13133 447 aa8.15□□□□□ -1.1
HMGB1P31-201ENST00000437242 CUEDC1Q9NWM3 386 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P31-201ENST00000437242 ZNF330Q9Y3S2 320 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P31-201ENST00000437242 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 GDF11O95390 407 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 GSK3AP49840 483 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 RASSF7Q02833 373 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 CYP2U1Q7Z449 544 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 KCTD17Q8N5Z5 321 aa8.14□□□□□ -1.11
HMGB1P31-201ENST00000437242 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
HMGB1P31-201ENST00000437242 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
HMGB1P31-201ENST00000437242 APBB1O00213 710 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 MARSP56192 900 aaKnown RBP8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 MAP3K10Q02779 954 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 GAS6Q14393 721 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 SLC27A3Q5K4L6 730 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 RIPOR1Q6ZS17 1223 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 BANK1Q8NDB2 785 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 GMCL1Q96IK5 515 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 ESF1Q9H501 851 aaKnown RBP8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 PCDHB11Q9Y5F2 797 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
HMGB1P31-201ENST00000437242 ARHGEF15O94989 841 aa8.11□□□□□ -1.11
HMGB1P31-201ENST00000437242 FOXR1Q6PIV2 292 aa8.11□□□□□ -1.11
HMGB1P31-201ENST00000437242 TRIM22Q8IYM9 498 aa8.11□□□□□ -1.11
HMGB1P31-201ENST00000437242 SOCS7O14512 581 aa8.1□□□□□ -1.11
HMGB1P31-201ENST00000437242 SCTRP47872 440 aa8.1□□□□□ -1.11
HMGB1P31-201ENST00000437242 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
HMGB1P31-201ENST00000437242 DYRK1BQ9Y463 629 aa8.1□□□□□ -1.11
HMGB1P31-201ENST00000437242 GPR25O00155 361 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 IRS1P35568 1242 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 POU4F2Q12837 409 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 CLN3Q13286 438 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 LYPD4Q6UWN0 246 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 MTMR14Q8NCE2 650 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 GAS2L1Q99501 681 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 ARHGEF10LQ9HCE6 1279 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
HMGB1P31-201ENST00000437242 H7C1W4 665 aa8.08□□□□□ -1.12
HMGB1P31-201ENST00000437242 GPR37L1O60883 481 aa8.08□□□□□ -1.12
HMGB1P31-201ENST00000437242 SCARF2Q96GP6 870 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P31-201ENST00000437242 OSBPL3Q9H4L5 887 aa8.08□□□□□ -1.12
HMGB1P31-201ENST00000437242 DBN1Q16643 649 aa8.07□□□□□ -1.12
HMGB1P31-201ENST00000437242 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
HMGB1P31-201ENST00000437242 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
HMGB1P31-201ENST00000437242 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
HMGB1P31-201ENST00000437242 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 TRAK2O60296 914 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 CELA2BP08218 269 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 KANK3Q6NY19 840 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 TAS1R3Q7RTX0 852 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 GRIP2Q9C0E4 1043 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 ENAMQ9NRM1 1142 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 RAB6BQ9NRW1 208 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 IGF1RP08069 1367 aa8.06□□□□□ -1.12
HMGB1P31-201ENST00000437242 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P31-201ENST00000437242 MYCP01106 439 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P31-201ENST00000437242 TIMMDC1Q9NPL8 285 aa8.05□□□□□ -1.12
HMGB1P31-201ENST00000437242 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
HMGB1P31-201ENST00000437242 DNMT3AQ9Y6K1 912 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P31-201ENST00000437242 GNRH1P01148 92 aa8.04□□□□□ -1.12
HMGB1P31-201ENST00000437242 WDR44Q5JSH3 913 aa8.04□□□□□ -1.12
HMGB1P31-201ENST00000437242 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
HMGB1P31-201ENST00000437242 F11P03951 625 aa8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 MX2P20592 715 aa8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 SUZ12Q15022 739 aaKnown RBP8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 ESYT1Q9BSJ8 1104 aa8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 NSFL1CQ9UNZ2 370 aaKnown RBP8.02□□□□□ -1.13
HMGB1P31-201ENST00000437242 IL2RAP01589 272 aa8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 BCRP11274 1271 aa8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 GTF2E1P29083 439 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 GPAT2Q6NUI2 795 aa8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 ZSCAN10Q96SZ4 725 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 PRM3Q9NNZ6 103 aa8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 CEP126Q9P2H0 1117 aa8.01□□□□□ -1.13
HMGB1P31-201ENST00000437242 PHF20L1A8MW92 1017 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 FOXK2Q01167 660 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 CENPCQ03188 943 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 PODNQ7Z5L7 613 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 NEDD1Q8NHV4 660 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 CDCA7Q9BWT1 371 aaPredicted RBP8□□□□□ -1.13
HMGB1P31-201ENST00000437242 GPAMQ9HCL2 828 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
HMGB1P31-201ENST00000437242 IGHA1P01876 353 aa7.99□□□□□ -1.13
HMGB1P31-201ENST00000437242 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
HMGB1P31-201ENST00000437242 GNASQ5JWF2 1037 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms