RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 FBXW7Q969H0 707 aa5.98□□□□□ -1.45
UBE4A-202ENST00000431736 PIM2Q9P1W9 311 aa5.98□□□□□ -1.45
UBE4A-202ENST00000431736 KCNJ4P48050 445 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 ARHGEF25Q86VW2 580 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 SETDB2Q96T68 719 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 TMEM131LA2VDJ0 1609 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 FLT4P35916 1363 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 USP6P35125 1406 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 LRRIQ1Q96JM4 1722 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.97□□□□□ -1.45
UBE4A-202ENST00000431736 FAM177BA6PVY3 158 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 CANXP27824 592 aaKnown RBP5.97□□□□□ -1.45
UBE4A-202ENST00000431736 PDE6BP35913 854 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 NGEFQ8N5V2 710 aa5.97□□□□□ -1.45
UBE4A-202ENST00000431736 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.97□□□□□ -1.45
UBE4A-202ENST00000431736 NF2P35240 595 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 TTLL12Q14166 644 aaPredicted RBP5.96□□□□□ -1.46
UBE4A-202ENST00000431736 NBPF6Q5VWK0 638 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 NBPF5PQ86XG9 351 aaPredicted RBP5.96□□□□□ -1.46
UBE4A-202ENST00000431736 DCAF5Q96JK2 942 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 NBPF4Q96M43 638 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 NRXN1Q9ULB1 1477 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 EAPPQ56P03 285 aaPredicted RBP5.96□□□□□ -1.46
UBE4A-202ENST00000431736 TECPR2O15040 1411 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 CAPN15O75808 1086 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 HOXC9P31274 260 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 RNF181Q9P0P0 153 aa5.96□□□□□ -1.46
UBE4A-202ENST00000431736 CD2APQ9Y5K6 639 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 EDC4Q6P2E9 1401 aaKnown RBP5.95□□□□□ -1.46
UBE4A-202ENST00000431736 E9PCH4 1651 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 SULT6B1Q6IMI4 303 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 CNKSR1Q969H4 720 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 STK31Q9BXU1 1019 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 IQCA1LA6NCM1 817 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 ADRA2BP18089 450 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 CLTCL1P53675 1640 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 LAMC1P11047 1609 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 FRAT2O75474 233 aaPredicted RBP5.95□□□□□ -1.46
UBE4A-202ENST00000431736 SSFA2P28290 1259 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 NYXQ9GZU5 481 aa5.95□□□□□ -1.46
UBE4A-202ENST00000431736 CWC22Q9HCG8 908 aaKnown RBP5.95□□□□□ -1.46
UBE4A-202ENST00000431736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.95□□□□□ -1.46
UBE4A-202ENST00000431736 DDX58O95786 925 aaKnown RBP5.95□□□□□ -1.46
UBE4A-202ENST00000431736 SYT17Q9BSW7 474 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 PANK3Q9H999 370 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 NEXNQ0ZGT2 675 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 SUPT20HQ8NEM7 779 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 FMNL2Q96PY5 1086 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 NEXMIFQ5QGS0 1516 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 ANP32CO43423 234 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 ABT1Q9ULW3 272 aaKnown RBP5.94□□□□□ -1.46
UBE4A-202ENST00000431736 LRP6O75581 1613 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 HSP90AB3PQ58FF7 597 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 TPTE2Q6XPS3 522 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 C2CD5Q86YS7 1000 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 CNBD1Q8NA66 436 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 CPDO75976 1380 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 PRR36Q9H6K5 1346 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 LOC102724428A0A0B4J2F2 783 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 SIK1P57059 783 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 CAMKK2Q96RR4 588 aa5.94□□□□□ -1.46
UBE4A-202ENST00000431736 ERBB3P21860 1342 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 MMP10P09238 476 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 APLP1P51693 650 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 DLC1Q96QB1 1528 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 PALLDQ8WX93 1383 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 HDAC5Q9UQL6 1122 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 ERVV-2B6SEH9 535 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 NEUROD2Q15784 382 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 SMC1BQ8NDV3 1235 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 GJA3Q9Y6H8 435 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 RTL1A6NKG5 1358 aa5.93□□□□□ -1.46
UBE4A-202ENST00000431736 ARHGEF6Q15052 776 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 RRP7AQ9Y3A4 280 aaKnown RBP5.92□□□□□ -1.46
UBE4A-202ENST00000431736 SETD1AO15047 1707 aaKnown RBP5.92□□□□□ -1.46
UBE4A-202ENST00000431736 HMOX1P09601 288 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 CHMP3Q9Y3E7 222 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 CPSF1Q10570 1443 aaKnown RBP5.92□□□□□ -1.46
UBE4A-202ENST00000431736 PPP1R42Q7Z4L9 355 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 MARCH10Q8NA82 808 aaPredicted RBP5.92□□□□□ -1.46
UBE4A-202ENST00000431736 MAP3K19Q56UN5 1328 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 IGSF1Q8N6C5 1336 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 SPATA31E1Q6ZUB1 1445 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 BTBD11A6QL63 1104 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 HSPA5P11021 654 aaKnown RBP5.92□□□□□ -1.46
UBE4A-202ENST00000431736 ALDH1B1P30837 517 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 TTLL6Q8N841 843 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 SIGLEC1Q9BZZ2 1709 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 ANKRD36BQ8N2N9 1353 aa5.92□□□□□ -1.46
UBE4A-202ENST00000431736 GNAT3A8MTJ3 354 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 EIF2S2P20042 333 aaKnown RBP5.91□□□□□ -1.46
UBE4A-202ENST00000431736 COL16A1Q07092 1604 aaPredicted RBP5.91□□□□□ -1.46
UBE4A-202ENST00000431736 ECE1P42892 770 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 NIM1KQ8IY84 436 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 TGFB2P61812 414 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.91□□□□□ -1.467e-7■■□□□ 13.9
UBE4A-202ENST00000431736 SHPRHQ149N8 1683 aa5.91□□□□□ -1.46
UBE4A-202ENST00000431736 TCERG1O14776 1098 aaKnown RBP5.91□□□□□ -1.46
UBE4A-202ENST00000431736 DDX46Q7L014 1031 aaKnown RBP5.91□□□□□ -1.46
UBE4A-202ENST00000431736 PRAG1Q86YV5 1406 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms