RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
SRPK1-205ENST00000423325 BRPF1P55201 1214 aaPredicted RBP12.22□□□□□ -0.45
SRPK1-205ENST00000423325 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
SRPK1-205ENST00000423325 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
SRPK1-205ENST00000423325 ABCC4O15439 1325 aa12.22□□□□□ -0.45
SRPK1-205ENST00000423325 G2E3Q7L622 706 aa12.21□□□□□ -0.45
SRPK1-205ENST00000423325 MSH6P52701 1360 aa12.21□□□□□ -0.45
SRPK1-205ENST00000423325 PSME1Q06323 249 aa12.21□□□□□ -0.46
SRPK1-205ENST00000423325 IL17REQ8NFR9 667 aa12.21□□□□□ -0.46
SRPK1-205ENST00000423325 LMOD3Q0VAK6 560 aa12.21□□□□□ -0.46
SRPK1-205ENST00000423325 NBR1Q14596 966 aa12.21□□□□□ -0.46
SRPK1-205ENST00000423325 RWDD1Q9H446 243 aaPredicted RBP12.2□□□□□ -0.46
SRPK1-205ENST00000423325 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
SRPK1-205ENST00000423325 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
SRPK1-205ENST00000423325 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
SRPK1-205ENST00000423325 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
SRPK1-205ENST00000423325 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
SRPK1-205ENST00000423325 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
SRPK1-205ENST00000423325 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
SRPK1-205ENST00000423325 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
SRPK1-205ENST00000423325 PROSER2Q86WR7 435 aaPredicted RBP12.18□□□□□ -0.46
SRPK1-205ENST00000423325 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
SRPK1-205ENST00000423325 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
SRPK1-205ENST00000423325 F6X3S4 739 aa12.18□□□□□ -0.46
SRPK1-205ENST00000423325 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
SRPK1-205ENST00000423325 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
SRPK1-205ENST00000423325 LGR6Q9HBX8 967 aa12.17□□□□□ -0.46
SRPK1-205ENST00000423325 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
SRPK1-205ENST00000423325 IP6K1Q92551 441 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 BCL11AQ9H165 835 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 RGPD5Q99666 1765 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 GCP02774 474 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 ZNF428Q96B54 188 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 C1orf167Q5SNV9 1468 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 KCNQ3O43525 872 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 SLC4A2P04920 1241 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 AAMPQ13685 434 aa12.16□□□□□ -0.46
SRPK1-205ENST00000423325 PXDNQ92626 1479 aa12.15□□□□□ -0.46
SRPK1-205ENST00000423325 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
SRPK1-205ENST00000423325 MEIS3Q99687 375 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 CABLES1Q8TDN4 633 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 NUCB1Q02818 461 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
SRPK1-205ENST00000423325 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
SRPK1-205ENST00000423325 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
SRPK1-205ENST00000423325 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
SRPK1-205ENST00000423325 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
SRPK1-205ENST00000423325 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
SRPK1-205ENST00000423325 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
SRPK1-205ENST00000423325 MST1RQ04912 1400 aa12.12□□□□□ -0.47
SRPK1-205ENST00000423325 SLIT3O75094 1523 aa12.12□□□□□ -0.47
SRPK1-205ENST00000423325 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
SRPK1-205ENST00000423325 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 FAM208AQ9UK61 1670 aaKnown RBP12.11□□□□□ -0.47
SRPK1-205ENST00000423325 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
SRPK1-205ENST00000423325 C19orf44Q9H6X5 657 aa12.11□□□□□ -0.47
SRPK1-205ENST00000423325 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
SRPK1-205ENST00000423325 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
SRPK1-205ENST00000423325 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
SRPK1-205ENST00000423325 ANXA1P04083 346 aa12.1□□□□□ -0.47
SRPK1-205ENST00000423325 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
SRPK1-205ENST00000423325 PHAXQ9H814 394 aaKnown RBP12.1□□□□□ -0.47
SRPK1-205ENST00000423325 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
SRPK1-205ENST00000423325 XIRP1Q702N8 1843 aaKnown RBP12.09□□□□□ -0.47
SRPK1-205ENST00000423325 CEMIPQ8WUJ3 1361 aa12.09□□□□□ -0.47
SRPK1-205ENST00000423325 APBB1O00213 710 aa12.09□□□□□ -0.47
SRPK1-205ENST00000423325 SMARCA5O60264 1052 aaPredicted RBP12.09□□□□□ -0.47
SRPK1-205ENST00000423325 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
SRPK1-205ENST00000423325 TAF7Q15545 349 aaPredicted RBP12.08□□□□□ -0.48
SRPK1-205ENST00000423325 CHRNA2Q15822 529 aa12.08□□□□□ -0.48
SRPK1-205ENST00000423325 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
SRPK1-205ENST00000423325 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
SRPK1-205ENST00000423325 KCNH5Q8NCM2 988 aa12.07□□□□□ -0.48
SRPK1-205ENST00000423325 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
SRPK1-205ENST00000423325 FLIIQ13045 1269 aa12.07□□□□□ -0.48
SRPK1-205ENST00000423325 ZNF530Q6P9A1 599 aaPredicted RBP12.07□□□□□ -0.48
SRPK1-205ENST00000423325 NCAPD2Q15021 1401 aa12.06□□□□□ -0.48
SRPK1-205ENST00000423325 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
SRPK1-205ENST00000423325 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
SRPK1-205ENST00000423325 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
SRPK1-205ENST00000423325 PTPRCP08575 1304 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 EIF4A1P60842 406 aaKnown RBP12.05□□□□□ -0.48
SRPK1-205ENST00000423325 ANKRD44Q8N8A2 993 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 ERBB3P21860 1342 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 STRCQ7RTU9 1775 aa12.05□□□□□ -0.48
SRPK1-205ENST00000423325 ATF3P18847 181 aa12.04□□□□□ -0.48
SRPK1-205ENST00000423325 FKBP5Q13451 457 aaPredicted RBP12.04□□□□□ -0.48
SRPK1-205ENST00000423325 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms