RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 NINLQ9Y2I6 1382 aa8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 TNS1Q9HBL0 1735 aaKnown RBP8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 CRB1P82279 1406 aa8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 TCP11L2Q8N4U5 519 aa8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 KTN1Q86UP2 1357 aaKnown RBP8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 FAM196AQ6ZSG2 479 aa8.28□□□□□ -1.08
AC009404.1-201ENST00000420330 USP31Q70CQ4 1352 aa8.27□□□□□ -1.08
AC009404.1-201ENST00000420330 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
AC009404.1-201ENST00000420330 COL18A1P39060 1754 aa8.27□□□□□ -1.09
AC009404.1-201ENST00000420330 PARD3Q8TEW0 1356 aa8.27□□□□□ -1.09
AC009404.1-201ENST00000420330 NFAT5O94916 1531 aa8.27□□□□□ -1.09
AC009404.1-201ENST00000420330 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
AC009404.1-201ENST00000420330 RRP1P56182 461 aaKnown RBP8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 LARP1Q6PKG0 1096 aaKnown RBP8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 WNK3Q9BYP7 1800 aa8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 DEFB132Q7Z7B7 95 aa8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 PDE3BQ13370 1112 aa8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 C8orf34Q49A92 452 aa8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 HDGFL2Q7Z4V5 671 aaPredicted RBP8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
AC009404.1-201ENST00000420330 CCDC7Q96M83 1385 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 CD163L1Q9NR16 1453 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 LRP5O75197 1615 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 PAXIP1Q6ZW49 1069 aaPredicted RBP8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 IPO4Q8TEX9 1081 aaKnown RBP8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 L1TD1Q5T7N2 865 aaKnown RBP8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 ARHGEF25Q86VW2 580 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 WDR17Q8IZU2 1322 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
AC009404.1-201ENST00000420330 LRRC37A3O60309 1634 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 RIPK4P57078 832 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 DSG3P32926 999 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 OVOS2A0A0G2JMS6 1433 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 OVOS2A0A0J9YW53 1432 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 OVOS2Q6IE36 1432 aa8.24□□□□□ -1.09
AC009404.1-201ENST00000420330 TPM2P07951 284 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 BCL9O00512 1426 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 RGPD3A6NKT7 1758 aaPredicted RBP8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 RGPD4Q7Z3J3 1758 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 RREB1Q92766 1687 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 VIRMAQ69YN4 1812 aaKnown RBP8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 TOM1L2Q6ZVM7 507 aa8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 CHMP4BQ9H444 224 aaKnown RBP8.23□□□□□ -1.09
AC009404.1-201ENST00000420330 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
AC009404.1-201ENST00000420330 CARD10Q9BWT7 1032 aa8.22□□□□□ -1.09
AC009404.1-201ENST00000420330 A0A1W2PP64 1363 aa8.22□□□□□ -1.09
AC009404.1-201ENST00000420330 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
AC009404.1-201ENST00000420330 TESK2Q96S53 571 aa8.22□□□□□ -1.09
AC009404.1-201ENST00000420330 EN1Q05925 392 aaPredicted RBP8.21□□□□□ -1.09
AC009404.1-201ENST00000420330 ANTXR1Q9H6X2 564 aa8.21□□□□□ -1.09
AC009404.1-201ENST00000420330 EP400Q96L91 3159 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 ESPNB1AK53 854 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 TRIM37O94972 964 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 DDB1Q16531 1140 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 FAM182BQ5T319 152 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 FAM208AQ9UK61 1670 aaKnown RBP8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 CSB-PGBD3P0DP91 1061 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 SMAP1Q8IYB5 467 aaPredicted RBP8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 SLC12A5Q9H2X9 1139 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 AXIN2Q9Y2T1 843 aa8.21□□□□□ -1.1
AC009404.1-201ENST00000420330 USP47Q96K76 1375 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 LTN1O94822 1766 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 SENP3-EIF4A1A0A087X0R7 540 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 ST20-MTHFSA0A0A6YYL1 179 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 APBA3O96018 575 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 CDCA8Q53HL2 280 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 NME9Q86XW9 330 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 ANKRD36BQ8N2N9 1353 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 RGPD5Q99666 1765 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 TNS2Q63HR2 1409 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 NUP188Q5SRE5 1749 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 TMF1P82094 1093 aa8.2□□□□□ -1.1
AC009404.1-201ENST00000420330 RBM42Q9BTD8 480 aaKnown RBP8.19□□□□□ -1.1
AC009404.1-201ENST00000420330 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
AC009404.1-201ENST00000420330 EZH2Q15910 746 aaKnown RBP8.19□□□□□ -1.1
AC009404.1-201ENST00000420330 CNKSR2Q8WXI2 1034 aa8.19□□□□□ -1.1
AC009404.1-201ENST00000420330 ERBB3P21860 1342 aa8.19□□□□□ -1.1
AC009404.1-201ENST00000420330 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 SBF2Q86WG5 1849 aa8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 SOX12O15370 315 aa8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 PNISRQ8TF01 805 aaKnown RBP8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 TMEM51Q9NW97 253 aa8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 RTL1A6NKG5 1358 aa8.18□□□□□ -1.1
AC009404.1-201ENST00000420330 COG3Q96JB2 828 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 KIF7Q2M1P5 1343 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 GOLGA6L3A6NEY3 463 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 EXOC5O00471 708 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 PLSCR1O15162 318 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 NHSQ6T4R5 1651 aa8.17□□□□□ -1.1
AC009404.1-201ENST00000420330 PSDA5PKW4 1024 aaPredicted RBP8.16□□□□□ -1.1
AC009404.1-201ENST00000420330 FAM161AQ3B820 660 aa8.16□□□□□ -1.1
AC009404.1-201ENST00000420330 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
AC009404.1-201ENST00000420330 ANKRD24Q8TF21 1146 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms