RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 DDX54Q8TDD1 881 aaKnown RBP13.11□□□□□ -0.31
NUP50-205ENST00000419387 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
NUP50-205ENST00000419387 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
NUP50-205ENST00000419387 POLA2Q14181 598 aa13.1□□□□□ -0.31
NUP50-205ENST00000419387 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
NUP50-205ENST00000419387 NBPF6Q5VWK0 638 aa13.09□□□□□ -0.31
NUP50-205ENST00000419387 CCER1Q8TC90 406 aaPredicted RBP13.09□□□□□ -0.31
NUP50-205ENST00000419387 NBPF4Q96M43 638 aa13.09□□□□□ -0.31
NUP50-205ENST00000419387 STK32BQ9NY57 414 aa13.09□□□□□ -0.31
NUP50-205ENST00000419387 FAM208AQ9UK61 1670 aaKnown RBP13.08□□□□□ -0.31
NUP50-205ENST00000419387 SLC15A2Q16348 729 aa13.08□□□□□ -0.32
NUP50-205ENST00000419387 ZCRB1Q8TBF4 217 aaKnown RBP13.08□□□□□ -0.32
NUP50-205ENST00000419387 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
NUP50-205ENST00000419387 NSD3Q9BZ95 1437 aa13.07□□□□□ -0.32
NUP50-205ENST00000419387 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
NUP50-205ENST00000419387 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
NUP50-205ENST00000419387 INSRP06213 1382 aa13.07□□□□□ -0.32
NUP50-205ENST00000419387 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
NUP50-205ENST00000419387 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
NUP50-205ENST00000419387 USHBP1Q8N6Y0 703 aa13.06□□□□□ -0.32
NUP50-205ENST00000419387 POLR3GLQ9BT43 218 aa13.06□□□□□ -0.32
NUP50-205ENST00000419387 PPP1R1BQ9UD71 204 aaPredicted RBP13.06□□□□□ -0.32
NUP50-205ENST00000419387 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
NUP50-205ENST00000419387 FLT4P35916 1363 aa13.06□□□□□ -0.32
NUP50-205ENST00000419387 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
NUP50-205ENST00000419387 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
NUP50-205ENST00000419387 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
NUP50-205ENST00000419387 PDGFDQ9GZP0 370 aaPredicted RBP13.05□□□□□ -0.32
NUP50-205ENST00000419387 EMILIN1Q9Y6C2 1016 aa13.05□□□□□ -0.32
NUP50-205ENST00000419387 MYOM1P52179 1685 aa13.05□□□□□ -0.32
NUP50-205ENST00000419387 KAT6BQ8WYB5 2073 aa13.04□□□□□ -0.32
NUP50-205ENST00000419387 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
NUP50-205ENST00000419387 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
NUP50-205ENST00000419387 SYTL4Q96C24 671 aaPredicted RBP13.04□□□□□ -0.32
NUP50-205ENST00000419387 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
NUP50-205ENST00000419387 MEGF6O75095 1541 aa13.03□□□□□ -0.32
NUP50-205ENST00000419387 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
NUP50-205ENST00000419387 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
NUP50-205ENST00000419387 BTAF1O14981 1849 aa13.03□□□□□ -0.32
NUP50-205ENST00000419387 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
NUP50-205ENST00000419387 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
NUP50-205ENST00000419387 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
NUP50-205ENST00000419387 CASZ1Q86V15 1759 aa13.02□□□□□ -0.33
NUP50-205ENST00000419387 PTGER2P43116 358 aa13.01□□□□□ -0.33
NUP50-205ENST00000419387 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
NUP50-205ENST00000419387 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
NUP50-205ENST00000419387 MTFR1LQ9H019 292 aa13□□□□□ -0.33
NUP50-205ENST00000419387 PANK3Q9H999 370 aa13□□□□□ -0.33
NUP50-205ENST00000419387 POLKQ9UBT6 870 aa13□□□□□ -0.33
NUP50-205ENST00000419387 NSD2O96028 1365 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
NUP50-205ENST00000419387 KCNQ4P56696 695 aa12.98□□□□□ -0.33
NUP50-205ENST00000419387 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
NUP50-205ENST00000419387 CYP27B1O15528 508 aa12.97□□□□□ -0.33
NUP50-205ENST00000419387 TNNT2P45379 298 aaPredicted RBP12.97□□□□□ -0.33
NUP50-205ENST00000419387 EYA1Q99502 592 aa12.97□□□□□ -0.33
NUP50-205ENST00000419387 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
NUP50-205ENST00000419387 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
NUP50-205ENST00000419387 CCNL1Q9UK58 526 aaPredicted RBP12.96□□□□□ -0.33
NUP50-205ENST00000419387 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
NUP50-205ENST00000419387 MAP2P11137 1827 aaKnown RBP12.96□□□□□ -0.33
NUP50-205ENST00000419387 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
NUP50-205ENST00000419387 SLC16A10Q8TF71 515 aa12.95□□□□□ -0.34
NUP50-205ENST00000419387 TFCP2L1Q9NZI6 479 aa12.95□□□□□ -0.34
NUP50-205ENST00000419387 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
NUP50-205ENST00000419387 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
NUP50-205ENST00000419387 NKX1-1Q15270 411 aaPredicted RBP12.94□□□□□ -0.34
NUP50-205ENST00000419387 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
NUP50-205ENST00000419387 SYT17Q9BSW7 474 aa12.94□□□□□ -0.34
NUP50-205ENST00000419387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.345e-6■□□□□ 10.1
NUP50-205ENST00000419387 ANKRD26Q9UPS8 1709 aa12.93□□□□□ -0.34
NUP50-205ENST00000419387 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
NUP50-205ENST00000419387 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
NUP50-205ENST00000419387 ARXQ96QS3 562 aa12.93□□□□□ -0.34
NUP50-205ENST00000419387 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
NUP50-205ENST00000419387 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
NUP50-205ENST00000419387 LY75O60449 1722 aa12.93□□□□□ -0.34
NUP50-205ENST00000419387 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
NUP50-205ENST00000419387 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
NUP50-205ENST00000419387 PIGBQ92521 554 aa12.91□□□□□ -0.34
NUP50-205ENST00000419387 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
NUP50-205ENST00000419387 PKD1L3Q7Z443 1732 aa12.91□□□□□ -0.34
NUP50-205ENST00000419387 PHKG2P15735 406 aa12.9□□□□□ -0.34
NUP50-205ENST00000419387 YY1P25490 414 aa12.9□□□□□ -0.34
NUP50-205ENST00000419387 POLD1P28340 1107 aa12.9□□□□□ -0.34
NUP50-205ENST00000419387 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
NUP50-205ENST00000419387 QSER1Q2KHR3 1735 aa12.89□□□□□ -0.35
NUP50-205ENST00000419387 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
NUP50-205ENST00000419387 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
NUP50-205ENST00000419387 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
NUP50-205ENST00000419387 PLEKHG2Q9H7P9 1386 aa12.88□□□□□ -0.35
NUP50-205ENST00000419387 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
NUP50-205ENST00000419387 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
NUP50-205ENST00000419387 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
NUP50-205ENST00000419387 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
NUP50-205ENST00000419387 ITGB4P16144 1822 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms