RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 KLF16Q9BXK1 252 aaPredicted RBP5.06□□□□□ -1.6
VPS41-206ENST00000418457 ZFAND3Q9H8U3 227 aa5.06□□□□□ -1.6
VPS41-206ENST00000418457 LILRA1O75019 489 aa5.05□□□□□ -1.6
VPS41-206ENST00000418457 DGAT1O75907 488 aa5.05□□□□□ -1.6
VPS41-206ENST00000418457 ATP1A2P50993 1020 aa5.05□□□□□ -1.6
VPS41-206ENST00000418457 CDCA8Q53HL2 280 aa5.05□□□□□ -1.6
VPS41-206ENST00000418457 KANK4Q5T7N3 995 aaPredicted RBP5.05□□□□□ -1.6
VPS41-206ENST00000418457 IRX2Q9BZI1 471 aaPredicted RBP5.05□□□□□ -1.6
VPS41-206ENST00000418457 CAPN5O15484 640 aaPredicted RBP5.04□□□□□ -1.6
VPS41-206ENST00000418457 AVPP01185 164 aa5.04□□□□□ -1.6
VPS41-206ENST00000418457 ADD1P35611 737 aaKnown RBP5.04□□□□□ -1.6
VPS41-206ENST00000418457 GTF2IP78347 998 aa5.04□□□□□ -1.6
VPS41-206ENST00000418457 SRPK2P78362 688 aaKnown RBP5.04□□□□□ -1.6
VPS41-206ENST00000418457 PSME1Q06323 249 aa5.04□□□□□ -1.6
VPS41-206ENST00000418457 LARP1Q6PKG0 1096 aaKnown RBP5.04□□□□□ -1.6
VPS41-206ENST00000418457 CYP2U1Q7Z449 544 aa5.04□□□□□ -1.6
VPS41-206ENST00000418457 OSBPL3Q9H4L5 887 aa5.04□□□□□ -1.6
VPS41-206ENST00000418457 ACIN1Q9UKV3 1341 aaKnown RBP5.03□□□□□ -1.6
VPS41-206ENST00000418457 FAM196BA6NMK8 535 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L15C9J2P7 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L10C9JJH3 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L13C9JLJ4 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L12C9JPN9 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L11C9JVI0 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L21D6R901 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L18D6R9N7 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L22D6RA61 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L17D6RBQ6 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L19D6RCP7 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L20D6RJB6 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 ADH1AP07327 375 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 RASA1P20936 1047 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 USP17L24Q0WX57 530 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 CBLBQ13191 982 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 CTC1Q2NKJ3 1217 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 Q6ZVU0 165 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 OGFOD1Q8N543 542 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 DNAAF2Q9NVR5 837 aaKnown RBP5.03□□□□□ -1.6
VPS41-206ENST00000418457 PCDHGA11Q9Y5H2 935 aa5.03□□□□□ -1.6
VPS41-206ENST00000418457 ATG7O95352 703 aa5.02□□□□□ -1.61
VPS41-206ENST00000418457 CLDN10P78369 228 aa5.02□□□□□ -1.61
VPS41-206ENST00000418457 CRTC2Q53ET0 693 aaPredicted RBP5.02□□□□□ -1.61
VPS41-206ENST00000418457 LARGE2Q8N3Y3 721 aa5.02□□□□□ -1.61
VPS41-206ENST00000418457 MEIOBQ8N635 442 aa5.02□□□□□ -1.61
VPS41-206ENST00000418457 ZNF594Q96JF6 807 aaPredicted RBP5.02□□□□□ -1.61
VPS41-206ENST00000418457 RBM19Q9Y4C8 960 aaKnown RBP5.02□□□□□ -1.61
VPS41-206ENST00000418457 ZBTB7BO15156 539 aaPredicted RBP5.01□□□□□ -1.61
VPS41-206ENST00000418457 AXIN1O15169 862 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 UPP2O95045 317 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 GNRH1P01148 92 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 SMCPP49901 116 aaPredicted RBP5.01□□□□□ -1.61
VPS41-206ENST00000418457 RELBQ01201 579 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 PTK7Q13308 1070 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 CCDC102BQ68D86 513 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 TPCN2Q8NHX9 752 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 AGBL1Q96MI9 1066 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 KIAA1024Q9UPX6 916 aa5.01□□□□□ -1.61
VPS41-206ENST00000418457 PTGIRP43119 386 aa5□□□□□ -1.61
VPS41-206ENST00000418457 DPYDQ12882 1025 aa5□□□□□ -1.61
VPS41-206ENST00000418457 ELOAQ14241 798 aaKnown RBP5□□□□□ -1.61
VPS41-206ENST00000418457 ESCO1Q5FWF5 840 aa5□□□□□ -1.61
VPS41-206ENST00000418457 ANKMY2Q8IV38 441 aa5□□□□□ -1.61
VPS41-206ENST00000418457 SIX5Q8N196 739 aa5□□□□□ -1.61
VPS41-206ENST00000418457 LINC00528Q8N1L1 170 aa5□□□□□ -1.61
VPS41-206ENST00000418457 CRIPAKQ8N1N5 446 aa5□□□□□ -1.61
VPS41-206ENST00000418457 TSEN34Q9BSV6 310 aaKnown RBP5□□□□□ -1.61
VPS41-206ENST00000418457 ARHGEF10LQ9HCE6 1279 aa5□□□□□ -1.61
VPS41-206ENST00000418457 NOVA2Q9UNW9 492 aaKnown RBP5□□□□□ -1.61
VPS41-206ENST00000418457 CSB-PGBD3P0DP91 1061 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 GDF10P55107 478 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 SEC13P55735 322 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 MRPL14Q6P1L8 145 aaKnown RBP4.99□□□□□ -1.61
VPS41-206ENST00000418457 KDF1Q8NAX2 398 aaPredicted RBP4.99□□□□□ -1.61
VPS41-206ENST00000418457 FAM200AQ8TCP9 573 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 ZNF395Q9H8N7 513 aaPredicted RBP4.99□□□□□ -1.61
VPS41-206ENST00000418457 ETNK1Q9HBU6 452 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 RAB6BQ9NRW1 208 aa4.99□□□□□ -1.61
VPS41-206ENST00000418457 A0A1W2PRU2 124 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 TMEM229AB2RXF0 380 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 MEN1O00255 615 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 WASLO00401 505 aaPredicted RBP4.98□□□□□ -1.61
VPS41-206ENST00000418457 BACH1O14867 736 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 DKK1O94907 266 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 STAU1O95793 577 aaKnown RBP4.98□□□□□ -1.61
VPS41-206ENST00000418457 INHAP05111 366 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 BMP2P12643 396 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 BMP1P13497 986 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 SCNN1DP51172 638 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 SCARF1Q14162 830 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 C6orf118Q5T5N4 469 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 Q6ZNB5 142 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS41-206ENST00000418457 CNKSR1Q969H4 720 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 NLRP3Q96P20 1036 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 ARXQ96QS3 562 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 AAASQ9NRG9 546 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 ZNF358Q9NW07 568 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 ZMIZ1Q9ULJ6 1067 aa4.98□□□□□ -1.61
VPS41-206ENST00000418457 SFI1A8K8P3 1242 aa4.97□□□□□ -1.61
VPS41-206ENST00000418457 ST8SIA5O15466 376 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms