RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 MCM10Q7L590 875 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
SSBP3-205ENST00000417664 CLUAP1Q96AJ1 413 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 NBPF6Q5VWK0 638 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 ARHGAP45Q92619 1136 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 NBPF4Q96M43 638 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
SSBP3-205ENST00000417664 BABAM1Q9NWV8 329 aa21.49■■□□□ 1.03
SSBP3-205ENST00000417664 MAP3K5Q99683 1374 aa21.49■■□□□ 1.03
SSBP3-205ENST00000417664 MVPQ14764 893 aaKnown RBP21.48■■□□□ 1.03
SSBP3-205ENST00000417664 RLBP1P12271 317 aa21.47■■□□□ 1.03
SSBP3-205ENST00000417664 TRIM27P14373 513 aa21.47■■□□□ 1.03
SSBP3-205ENST00000417664 CAMTA1Q9Y6Y1 1673 aa21.47■■□□□ 1.03
SSBP3-205ENST00000417664 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
SSBP3-205ENST00000417664 ANKRD24Q8TF21 1146 aa21.47■■□□□ 1.03
SSBP3-205ENST00000417664 NOB1Q9ULX3 412 aaKnown RBP21.47■■□□□ 1.03
SSBP3-205ENST00000417664 LRRC37A3O60309 1634 aa21.46■■□□□ 1.03
SSBP3-205ENST00000417664 AMOTQ4VCS5 1084 aa21.46■■□□□ 1.03
SSBP3-205ENST00000417664 TSPYL6Q8N831 410 aa21.46■■□□□ 1.03
SSBP3-205ENST00000417664 C8orf58Q8NAV2 365 aa21.45■■□□□ 1.02
SSBP3-205ENST00000417664 SOS2Q07890 1332 aaPredicted RBP21.45■■□□□ 1.02
SSBP3-205ENST00000417664 TCERG1O14776 1098 aaKnown RBP21.44■■□□□ 1.02
SSBP3-205ENST00000417664 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
SSBP3-205ENST00000417664 DDX17Q92841 729 aaKnown RBP21.44■■□□□ 1.02
SSBP3-205ENST00000417664 DDX19BQ9UMR2 479 aa21.44■■□□□ 1.02
SSBP3-205ENST00000417664 ERBB3P21860 1342 aa21.44■■□□□ 1.02
SSBP3-205ENST00000417664 CPDO75976 1380 aa21.44■■□□□ 1.02
SSBP3-205ENST00000417664 PLEKHG2Q9H7P9 1386 aa21.44■■□□□ 1.02
SSBP3-205ENST00000417664 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-205ENST00000417664 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
SSBP3-205ENST00000417664 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
SSBP3-205ENST00000417664 CHMP4BQ9H444 224 aaKnown RBP21.42■■□□□ 1.02
SSBP3-205ENST00000417664 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
SSBP3-205ENST00000417664 CRYBG1Q9Y4K1 1723 aa21.41■■□□□ 1.02
SSBP3-205ENST00000417664 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
SSBP3-205ENST00000417664 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
SSBP3-205ENST00000417664 TNNQ9UQP3 1299 aa21.41■■□□□ 1.02
SSBP3-205ENST00000417664 LRRC59Q96AG4 307 aaKnown RBP21.4■■□□□ 1.02
SSBP3-205ENST00000417664 CEMIPQ8WUJ3 1361 aa21.4■■□□□ 1.02
SSBP3-205ENST00000417664 RGPD2P0DJD1 1756 aa21.4■■□□□ 1.02
SSBP3-205ENST00000417664 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
SSBP3-205ENST00000417664 ELL2O00472 640 aaPredicted RBP21.4■■□□□ 1.02
SSBP3-205ENST00000417664 AKAP4Q5JQC9 854 aa21.4■■□□□ 1.02
SSBP3-205ENST00000417664 COL18A1P39060 1754 aa21.39■■□□□ 1.01
SSBP3-205ENST00000417664 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
SSBP3-205ENST00000417664 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
SSBP3-205ENST00000417664 API5Q9BZZ5 524 aaKnown RBP21.39■■□□□ 1.01
SSBP3-205ENST00000417664 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
SSBP3-205ENST00000417664 FAM208AQ9UK61 1670 aaKnown RBP21.39■■□□□ 1.01
SSBP3-205ENST00000417664 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
SSBP3-205ENST00000417664 PLEKHG5O94827 1062 aa21.37■■□□□ 1.01
SSBP3-205ENST00000417664 ITPRIPQ8IWB1 547 aa21.37■■□□□ 1.01
SSBP3-205ENST00000417664 RGPD5Q99666 1765 aa21.36■■□□□ 1.01
SSBP3-205ENST00000417664 TMEM57Q8N5G2 664 aa21.35■■□□□ 1.01
SSBP3-205ENST00000417664 NHSL1Q5SYE7 1610 aa21.35■■□□□ 1.01
SSBP3-205ENST00000417664 ABCC4O15439 1325 aa21.34■■□□□ 1.01
SSBP3-205ENST00000417664 C1orf141Q5JVX7 400 aa21.34■■□□□ 1.01
SSBP3-205ENST00000417664 ZNF530Q6P9A1 599 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-205ENST00000417664 RWDD1Q9H446 243 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-205ENST00000417664 PTPRCP08575 1304 aa21.34■■□□□ 1.01
SSBP3-205ENST00000417664 CABLES1Q8TDN4 633 aa21.34■■□□□ 1.01
SSBP3-205ENST00000417664 CHMP4AQ9BY43 222 aa21.34■■□□□ 1.01
SSBP3-205ENST00000417664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.34■■□□□ 1.016e-7■■□□□ 12.6
SSBP3-205ENST00000417664 IGHDP01880 384 aa21.32■■□□□ 1
SSBP3-205ENST00000417664 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
SSBP3-205ENST00000417664 ZBTB40Q9NUA8 1239 aa21.32■■□□□ 1
SSBP3-205ENST00000417664 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
SSBP3-205ENST00000417664 MIS18AQ9NYP9 233 aa21.31■■□□□ 1
SSBP3-205ENST00000417664 KRT24Q2M2I5 525 aa21.31■■□□□ 1
SSBP3-205ENST00000417664 NLRP2Q9NX02 1062 aa21.31■■□□□ 1
SSBP3-205ENST00000417664 CSB-PGBD3P0DP91 1061 aa21.29■■□□□ 1
SSBP3-205ENST00000417664 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
SSBP3-205ENST00000417664 HDAC1Q13547 482 aaPredicted RBP21.29■■□□□ 1
SSBP3-205ENST00000417664 HOXB7P09629 217 aa21.28■■□□□ 1
SSBP3-205ENST00000417664 TEFQ10587 303 aa21.28■■□□□ 1
SSBP3-205ENST00000417664 CCDC30Q5VVM6 783 aa21.28■■□□□ 1
SSBP3-205ENST00000417664 RNMTO43148 476 aaKnown RBP21.28■■□□□ 1
SSBP3-205ENST00000417664 SPG7Q9UQ90 795 aa21.28■■□□□ 1
SSBP3-205ENST00000417664 ZBTB7BO15156 539 aaPredicted RBP21.27■■□□□ 1
SSBP3-205ENST00000417664 CHRNA2Q15822 529 aa21.27■■□□□ 1
SSBP3-205ENST00000417664 STK31Q9BXU1 1019 aa21.27■■□□□ 1
SSBP3-205ENST00000417664 PRDM11Q9NQV5 511 aa21.27■■□□□ 1
SSBP3-205ENST00000417664 CACNA1FO60840 1977 aa21.26■□□□□ 0.99
SSBP3-205ENST00000417664 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
SSBP3-205ENST00000417664 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
SSBP3-205ENST00000417664 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
SSBP3-205ENST00000417664 ADAMTS7Q9UKP4 1686 aa21.26■□□□□ 0.99
SSBP3-205ENST00000417664 ABCA3Q99758 1704 aa21.24■□□□□ 0.99
SSBP3-205ENST00000417664 KDM3BQ7LBC6 1761 aa21.24■□□□□ 0.99
SSBP3-205ENST00000417664 WDR17Q8IZU2 1322 aa21.23■□□□□ 0.99
SSBP3-205ENST00000417664 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
SSBP3-205ENST00000417664 LTBP4Q8N2S1 1624 aa21.23■□□□□ 0.99
SSBP3-205ENST00000417664 BTBD11A6QL63 1104 aa21.22■□□□□ 0.99
SSBP3-205ENST00000417664 RGS12O14924 1447 aa21.22■□□□□ 0.99
SSBP3-205ENST00000417664 EIF4A1P60842 406 aaKnown RBP21.22■□□□□ 0.99
SSBP3-205ENST00000417664 AHDC1Q5TGY3 1603 aaPredicted RBP21.21■□□□□ 0.99
SSBP3-205ENST00000417664 HSP90AB1P08238 724 aaKnown RBP21.21■□□□□ 0.99
SSBP3-205ENST00000417664 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms